Candidatus Pelagibacter ubique: SAR11_0828
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Entry
SAR11_0828 CDS
T00257
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
pub
Candidatus Pelagibacter ubique
Pathway
pub04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
SAR11_0828 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pub03016
]
SAR11_0828 (trmU)
Enzymes [BR:
pub01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
SAR11_0828 (trmU)
Transfer RNA biogenesis [BR:
pub03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
SAR11_0828 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
QueC
Asn_synthase
NAD_synthase
Arginosuc_synth
ATP_bind_3
ThiI
DUF7411
Motif
Other DBs
NCBI-ProteinID:
AAZ21645
UniProt:
Q4FME4
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All DBs
Position
798049..799164
Genome browser
AA seq
371 aa
AA seq
DB search
MTKLNSIGIAKDPKDTLVIVAMSGGVDSSTVAAMMKNEGYNVIGITLKLYNDSKETASSK
QCCAGQDIMDAKRVADKLKIEHKILYYQNKFKEGVIDNFIDSYLNGETPIPCVQCNKTVK
FTDLFEEAKRLNADALVTGHYVKSITEKDNTDMYRGIDLNRDQSYFLFNTTKDQLNFLRF
PLGNLLKDETRNIARELDLNVADKPDSQDICFVPNGDYASVIEKFRPNSFSKGNIKNMNG
EVIGVHDGIINYTIGQRKGIGVSDKNPLYVVKIIADKNEIIVGAKEHLVKTKINLKDLNI
ITNDQNDFKNELFVKVRSTGRLIKAKIDINDTNANVNLLEEEHGIAPGQACVFYAKNNNG
YKVLGGGWIKS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaattgaattctattggaatagctaaagacccaaaagacaccttagttattgtt
gcaatgtcaggtggagtagattcttcaacggttgcagctatgatgaaaaatgaaggttac
aatgtcattggtattactcttaaactttataatgacagtaaagagacagcttcttcaaaa
caatgttgtgcaggccaagatattatggatgcaaaaagagtagctgataaattaaagata
gagcataaaattttatattatcaaaataaatttaaagaaggagttattgataattttatt
gatagctatctaaatggagaaacacctattccatgtgtgcaatgtaataagacagttaaa
tttacagacttatttgaagaagctaaaagacttaacgctgatgctttagtaacaggacac
tacgttaaaagtattactgaaaaagataatacagatatgtacagaggaattgatttaaat
agagatcaaagttattttttatttaataccacaaaagatcaattaaattttttaagattt
cctttaggcaatcttcttaaagatgaaacaagaaatattgcaagagaacttgatcttaat
gttgcagacaaacctgacagccaagatatttgttttgtaccaaatggagactatgcttca
gttatagaaaaatttagaccaaactcttttagtaaaggtaatattaaaaatatgaatggt
gaagtgataggagttcatgacggcattattaattatacaattggtcaaagaaaaggaatt
ggagtttctgataagaacccattgtatgtagtaaagattattgctgataaaaatgaaatt
attgttggagccaaggaacatcttgttaaaacaaaaataaatttaaaagatttgaatatt
attacaaacgatcaaaatgattttaaaaatgaattgttcgtaaaggtaaggtctactgga
agattaattaaagccaagatagatatcaatgataccaatgcgaacgttaatttattggaa
gaggagcacggtattgcgcctggtcaagcgtgtgtgttttatgcaaaaaacaataatggc
tataaggttcttggtggtggttggataaaaagttag
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