Candidatus Pelagibacter ubique: SAR11_0873
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Entry
SAR11_0873 CDS
T00257
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pub
Candidatus Pelagibacter ubique
Pathway
pub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAR11_0873 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pub03400
]
SAR11_0873 (ung)
Enzymes [BR:
pub01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SAR11_0873 (ung)
DNA repair and recombination proteins [BR:
pub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAR11_0873 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AAZ21689
UniProt:
Q4FMA0
LinkDB
All DBs
Position
complement(841141..841815)
Genome browser
AA seq
224 aa
AA seq
DB search
MSIKFKKLNNSIVKCKSCPRLIEFSKKISVKKRKQNMKETYWAKPVTGFGDINAKLLIVG
LAPAAHGGTRTGRAFTGDKSGDFLFNCLFKANISNRSTSTHIDDGLKLNKTYITNILKCV
PPEDKPLKNELINCSTFFKNELILLKNLKVIIALGKVSFDNCIEFYKKNYHFDKKLIFIH
GVKYLLPDNKILIPSYHPSPRNVNRKIINTQKMVSLLKKAKKII
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgagtataaaattcaaaaaattaaataattcaatagttaaatgtaaaagttgtcctagg
ttaattgaatttagtaaaaaaatttctgtaaaaaaaagaaaacaaaatatgaaagaaact
tattgggctaaaccagttacaggatttggtgatattaacgctaaactattaatagtaggt
ctagcacctgcagctcatggaggtactaggacaggcagagccttcactggagataaatct
ggagattttctatttaactgtttatttaaagctaacatatcgaatagatcaacttctacg
catattgatgatggtttaaaattaaataaaacctatattacaaatattcttaaatgtgtc
cctccagaagataaacctttaaaaaatgaattaatcaactgttcaacattttttaaaaat
gaattgatcttattaaaaaatttaaaagttattatagcgttaggtaaagtttcatttgat
aattgtatagaattttataaaaaaaattatcattttgataaaaaattaatcttcatacat
ggtgtaaaatatttattaccagataataaaattctaattcctagttatcaccctagtcca
agaaatgttaatagaaaaataattaatacacaaaaaatggtaagcttgttaaagaaggct
aagaaaattatttaa
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