Candidatus Pelagibacter ubique: SAR11_0938
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Entry
SAR11_0938 CDS
T00257
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxy-phosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
pub
Candidatus Pelagibacter ubique
Pathway
pub00541
Biosynthesis of various nucleotide sugars
pub01100
Metabolic pathways
pub01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SAR11_0938 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pub01005
]
SAR11_0938 (kdsA)
Enzymes [BR:
pub01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
SAR11_0938 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
pub01005
]
Lipid A
SAR11_0938 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AAZ21750
UniProt:
Q4FM38
LinkDB
All DBs
Position
924264..925088
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AA seq
274 aa
AA seq
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MSSKKVNCGNIEISNDNKICIIAGPCQLETEQHAMDMAGKIQEITKKLGLGFIYKTSFDK
ANRTSLKGQRGAGLEASLPVFDKIKKELNVPILTDIHNAEQCSLLKDHVDILQIPAFLCR
QTDLLIAAAKTNKIINVKKGQFLAPWDMVNVTKKISDSGNNNILVTERGASFGYNTLVSD
MRSLPIMAKNGYPVIFDATHSVQQPGGLGETSGGQREFVEYLARAAVAVGVAGVFIETHQ
DPDNAPSDGPNMVPLDKLEKLLSQLFEIDNLIKK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaaaaaagttaattgcggaaatatagaaatttcaaacgataataagatttgt
attattgctggaccttgtcagcttgaaactgaacaacatgcaatggacatggcaggtaaa
attcaagaaattacaaaaaaattaggtcttggatttatctataaaacttcatttgataaa
gcgaatagaaccagtttaaaagggcaaagaggggccggtttagaagcttcccttcccgta
tttgataaaattaaaaaagaactcaacgttccaattttaaccgacattcataacgcagaa
caatgttcattattaaaagatcatgttgatattttgcaaatacctgcatttctatgtagg
caaacggatctgttaatcgctgctgcaaaaacgaataaaattataaatgttaaaaaaggt
caattcctagcaccatgggatatggttaatgttacaaaaaaaatttcagactcgggtaat
aataacattttagttacagaaagaggagcaagctttggttataatactcttgtctctgac
atgagatctctacccataatggcaaaaaatggttatcctgttatttttgatgccacacat
tcagttcaacaacctggaggcctaggcgagactagtggtggtcaaagagagtttgttgag
tacttagcaagagctgcggttgctgtaggtgttgcgggtgtttttattgaaacacatcaa
gacccagataatgctccatctgatggacctaacatggttccattagataaattagaaaaa
ttattatctcaattatttgaaatagataatctgattaaaaaataa
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