Candidatus Pelagibacter ubique: SAR11_0948
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Entry
SAR11_0948 CDS
T00257
Symbol
ntrX
Name
(GenBank) nitrogen assimilation regulatory protein ntrX
KO
K13599
two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
pub
Candidatus Pelagibacter ubique
Pathway
pub02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SAR11_0948 (ntrX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pub02022
]
SAR11_0948 (ntrX)
Two-component system [BR:
pub02022
]
NtrC family
NtrY-NtrX (nitrogen regulation)
SAR11_0948 (ntrX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA
AAA_2
AAA_5
AAA_14
VpsR
ResIII
FleQ
NB-ARC
MCM
cREC_REC
SMC_N
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AAZ21759
UniProt:
Q4FM29
LinkDB
All DBs
Position
931902..933257
Genome browser
AA seq
451 aa
AA seq
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MSTEILIIDDNADIRNIINDLIIEAGYKTRLAANYNQALNEIDKKLPDVAIIDVKLDKSD
NDGLELLSHIKTKDKNIPVIIITGHANVEMAIKALKAGAFEFIEKPFNQERLLNFINRAV
ENLNLKNKNKEFESKLFYSYELIGVSDNFKKIKDQIDKISVSESRIFINGPTGSGKELIA
RKIHKESKRQKGPFVILNGALLDIKKYELELFGEEKNNGSITYGALEKSTKGILLIDEIS
EIPLDTQSKILRVLIDQKFRRINGSHDINVDVRIICSSSKDIKKEIKNGNFREDLYHRLN
VFEINIDPLKDRVSDIPLLVEYFSEKISINYNLKKLSIDTNNKYLLNYDWPGNVRELRNL
IERIAILAPDSTDKISNIIKESLKTPDIRNIPSENSLSIPLKEARENFEKEYLTTQLKKF
NGNISKTADFIGMERSALHRKLKGLGIKELN
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgaaatattaattattgatgataatgcagatattagaaacattattaatgat
ctaataattgaagctggttacaaaacaagattagctgcaaactataatcaagcattaaat
gagattgataaaaaactcccagatgttgcaataatagatgttaagttagataaaagtgac
aatgatggtttagaactgttatcacacatcaaaactaaggataaaaatattccagttata
ataattacagggcatgcgaatgttgaaatggcaatcaaagctttaaaagctggtgctttc
gaatttattgaaaaaccttttaatcaggaaagattattaaattttattaatagggctgtt
gaaaatttaaatcttaaaaataagaataaagaatttgaaagtaaacttttttattcttat
gaactaattggtgttagtgacaattttaaaaaaataaaagatcaaatagataaaatatca
gtttccgaaagtagaatttttatcaatggacctactggctcaggtaaagagttgatagca
agaaagatacataaagaatccaaaagacagaagggtccttttgttattctgaatggcgca
ttacttgatattaaaaaatatgaattagaattatttggtgaagaaaaaaataatggctct
ataacttatggcgctttagagaaatcaacaaagggtatacttttaatagatgaaatttct
gaaatcccacttgatactcaatctaaaattttaagagttttaatagatcaaaaatttaga
agaattaatggcagccatgatattaatgttgatgtaagaattatatgctcatctagtaaa
gatataaaaaaagaaataaaaaatggtaattttagagaagacttatatcatcgacttaat
gtatttgaaattaacatcgaccctttaaaagacagggtttcagatatacctttgttagtt
gaatatttttctgaaaaaatttcaataaactacaatttaaaaaaactaagtattgataca
aataataaatatttactcaattatgattggccaggaaatgttagagaattaagaaattta
atagagagaatagcaatacttgcgcctgatagtactgataaaatttcaaatattattaaa
gaatctctaaaaacacctgatattagaaatataccatcagaaaactctttatctatacca
ttaaaagaagctagagaaaattttgaaaaagagtatttaactacccaattaaaaaaattt
aatggcaatatatcaaaaactgccgattttattggaatggaaagatctgccttacataga
aagcttaaaggtttagggatcaaggaattaaactaa
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