Candidatus Pelagibacter ubique: SAR11_0985
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Entry
SAR11_0985 CDS
T00257
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pub
Candidatus Pelagibacter ubique
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pub03032
]
SAR11_0985 (gyrA)
03400 DNA repair and recombination proteins [BR:
pub03400
]
SAR11_0985 (gyrA)
Enzymes [BR:
pub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SAR11_0985 (gyrA)
DNA replication proteins [BR:
pub03032
]
Prokaryotic type
DNA Topoisomerases
SAR11_0985 (gyrA)
DNA repair and recombination proteins [BR:
pub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SAR11_0985 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Lys-AminoMut_A
Motif
Other DBs
NCBI-ProteinID:
AAZ21793
UniProt:
Q4FLZ5
LinkDB
All DBs
Position
966406..968955
Genome browser
AA seq
849 aa
AA seq
DB search
MKDTEIPKDKNIKLISMHDEMSSSYLSYAMSVIVSRALPDVRDGLKPVHRRILFAMYKGG
YDWSKQFRKSARIVGDVIGKYHPHGDQSVYDALVRMVQDFSMSLPLVQGQGNFGSIDGDP
AAAMRYTETRLAKVSQYLIDDIEKDTIEYKSNYDETEKEPSVLPAQYPNLLVNGAGGIAV
GMATSIPPHNLGEIIDGTLALIENKDIKIKELMKHIPGPDFPTGGVIIGKEIIKAGYNVG
RGSFKIRGEISVEAQKNGRERLVITSVPYQVNKSVLNERIAQLVREKKIEGIKDIRDESN
REGIRVAIDLRNGVEPETIKRLLYKNTSIESSFGFNTLAIVDGKPKICNLKEFLTNFLTF
REDVVIKKTKFDLKKAEDRAHILIGLSVSVENLDKIIKIIRSSKTPDDAKKSLLNTKWKI
NKSLKLISLVEDKKEKNLYSLSDPQVIAILELRLQKLTALGINEIEVEIKKLADLIKGYK
KIINSKKELLNVISEELKTIKEKFAVPRRTKIIDAILNYDIEETIQKESVIITVTLQGYI
KRGALSSVKQQKRGGKGKSGITTRDEDSVVQTLSVNTHTSVLFFSTEGLVYKIKAWKIPE
GSTTSKGKSLFNILPLKNHQSISSIMPFPDEESDTKNLQIVFATAKGKVRKNSLEDFSSI
NSAGKIAIKLDPNDKIVGVEICKDDQDVMLSTKNGKCIRFESKKLRIFKGRSSKGIKGIE
LSPNDEIVSLSITNKEKIKKDTKSDGRFVLSITENGYGKKTLNNEYRVTNRGGKGIIGIV
NSPRNGSICSSFPVIEGDDVMISTNKGRVIRVAVKEIRTAGRNTQGVRIIKLSGDEKVVS
AIKIDDNLE
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacacagaaatacctaaagataaaaatattaaacttatctccatgcatgatgag
atgagttcatcgtatttgtcatatgcgatgagtgtaattgtgagtagggctcttcctgat
gttagggacggacttaaaccagttcatagaagaatattatttgccatgtataaaggtggt
tacgattggtcaaaacaatttagaaaatctgcaagaatagttggagatgttattggtaaa
tatcacccacatggagatcaatctgtttatgatgctctagttagaatggttcaggatttt
tctatgagtttacctcttgttcagggccaaggtaactttggatctattgatggagatcca
gctgcggctatgagatataccgagactagattggctaaagtttcacaatacttaatagac
gatattgaaaaagataccatcgaatacaagagtaactacgatgaaacagaaaaagaacca
tcagttttacccgctcaatatcctaatttattggttaatggagccggtggtatagcagtt
ggaatggcaacaagcatacctccacataatttaggtgaaatcattgatggaacattagcc
ttaattgagaataaagatattaagattaaagaattaatgaaacacattccaggtcctgat
tttcctacaggtggtgtcatcattggtaaagaaattattaaagcaggatataatgttggt
cgtggatcatttaaaattagaggtgaaataagtgttgaagcacaaaaaaatggtagagaa
agactagttattacatctgtaccttatcaagtaaataaatcagttttaaatgaaagaatt
gcccaactggttagagagaaaaaaattgaaggaataaaagatattagggatgagtctaat
agagaagggattagagtagcaattgatttaagaaatggtgttgagccagaaactattaag
cgattactttataaaaatacttcgatagagagttcttttggttttaatactttagcaatc
gttgatggcaaacctaaaatatgtaatttaaaagagtttttaacaaattttttaacgttt
cgtgaagatgttgttattaagaaaactaaatttgacttaaaaaaagcagaggacagagct
catattttgattgggttatctgtatctgttgagaatttagataagattataaaaattata
cggtcttcaaaaactcctgatgatgctaaaaaatcattattaaacactaagtggaaaatt
aataaatctttaaagttaatttcacttgtcgaagataagaaggagaaaaatttatactca
ttatctgacccacaagtaattgctattttagaacttagacttcaaaaacttacagccctt
ggtattaatgaaatagaagtcgaaattaaaaaattagctgatttaattaagggatataag
aaaataattaattccaaaaaagaacttttaaacgtgataagtgaagagcttaaaactatt
aaagaaaaatttgctgtaccacgaagaactaaaattatagatgctattttaaactatgat
attgaagaaactattcaaaaagagtctgttataattacagttacacttcagggatatatt
aaaagaggagcattaagcagcgttaaacaacaaaaaagaggtggcaagggtaaatctggg
atcacaacgagagatgaagattctgtagtacaaactttatcagttaacacacacacttct
gttcttttcttttcgacagaaggacttgtctacaaaattaaagcttggaagatacctgag
ggatcaactacatcaaaaggtaaatctctatttaatatcttgcctttaaaaaatcatcaa
tcaatcagttcaattatgccattccctgatgaagaaagtgatacgaaaaatcttcaaatt
gtttttgcaactgcaaagggcaaggttagaaaaaacagtctagaagacttttcttccatt
aattcagctggaaaaattgcaataaaattagatcccaatgataaaatcgtaggagttgaa
atttgtaaagatgatcaagatgtaatgctaagtacaaaaaatggtaaatgcattagattt
gaatcaaagaaactaagaatatttaaaggtagatcctccaaaggtataaagggtatagaa
ctatctcctaatgatgagattgtttctctttcaataacaaataaagaaaaaatcaaaaaa
gatactaaatctgatggaagatttgttttatcaattacagaaaatggatacggcaaaaaa
actttaaacaatgaatatagagttaccaatagaggtggtaagggcataattggaattgtt
aactcacctagaaatggcagtatatgttcgtcatttcctgttatagagggagatgatgtg
atgatttcaacaaataaaggtagagtgattagagttgccgttaaagaaatcagaacagcg
ggaagaaatactcaaggtgtaagaattatcaaattatctggtgatgaaaaagttgtttca
gcaataaaaattgatgataacttggagtaa
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