Candidatus Pelagibacter ubique: SAR11_1001
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Entry
SAR11_1001 CDS
T00257
Symbol
metS
Name
(GenBank) methionyl-tRNA synthetase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
pub
Candidatus Pelagibacter ubique
Pathway
pub00450
Selenocompound metabolism
pub00970
Aminoacyl-tRNA biosynthesis
pub01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SAR11_1001 (metS)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SAR11_1001 (metS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pub01007
]
SAR11_1001 (metS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pub03016
]
SAR11_1001 (metS)
Enzymes [BR:
pub01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
SAR11_1001 (metS)
Amino acid related enzymes [BR:
pub01007
]
Aminoacyl-tRNA synthetase
Class I (U)
SAR11_1001 (metS)
Transfer RNA biogenesis [BR:
pub03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SAR11_1001 (metS)
Prokaryotic type
Other AARSs
SAR11_1001 (metS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
tRNA-synt_1f
VCD
Anticodon_1
Motif
Other DBs
NCBI-ProteinID:
AAZ21808
UniProt:
Q4FLY0
LinkDB
All DBs
Position
980814..982355
Genome browser
AA seq
513 aa
AA seq
DB search
MDKNYYITTPIYYPSARPHMGHAYSSIVADFFARFKRIDGFNVHFLTGTDEHGLKIQRAA
ERKKIDPQTFCDEISQTFRDLSKTLNLSNTDFIRTTEERHKKTVQHLWNELEKNDDIYLS
KYSGWYSVSDEAYYSDEEISEKENVKIAISSGSSVEWIEEESYFFRLSKWQDELLKYYEK
NPDFISPKSRKNEVISFVKGGLKDLSISRKAFSWGIKVPNSQDHVIYVWLDALTNYLSAL
NYPDTNDELFKKFWPASVHLIGKDILRFHSVYWPAFLMAAKIPLPKKVYGHGWILSGDEK
MSKSKGNILDPLDIIEIYGLDPLRYYLIKEVSFGNDGNISQDRLEDCINSDLANNYGNLC
QRVTAFAEKNCSSLVPDNTKFNDEDLVMLNKFTDNLDLIRTEIDNQNINYYINFIVSALF
EANKYFNDQEPWKKKDDKDRLNTIVYTSLEMIRKISFMLYPIIPSSIEKALKIFNLNIDA
INLESIAKHDYLISGKPINKIDILFKKIEKKHD
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaattactatataactacaccaatttattatccttcagcgagaccccatatg
ggtcatgcatactcaagtattgttgctgatttttttgcaagatttaaacgtatagatggg
ttcaatgttcattttttaacaggtacggatgagcatggtttaaaaatacaacgagcagca
gagagaaaaaaaattgatcctcaaactttttgtgatgaaattagtcaaacgtttagagat
ctttcaaaaacattaaatttatctaatactgatttcattagaactactgaagaaagacac
aaaaaaacagttcaacatctgtggaatgaacttgaaaaaaatgacgatatttatttatca
aaatattctggttggtattctgtttctgatgaagcttattacagtgatgaagaaattagt
gaaaaagaaaacgttaaaattgccatttcatctggttcttcggttgaatggatagaggaa
gagtcttatttttttagattatctaagtggcaagatgaactactaaaatattatgaaaaa
aatccagactttatttcaccaaaatccagaaaaaatgaagtaattagttttgtaaaaggt
gggttaaaagacttatccataagccgtaaagcattctcttggggcatcaaggttcctaat
agtcaagatcatgtgatttatgtttggcttgatgctctaacaaattatttaagtgcttta
aactacccagatacaaatgatgaactgtttaaaaaattttggcctgcatctgttcattta
ataggtaaagatatattaagatttcattctgtatattggccagcatttttaatggctgca
aaaatacctttacctaagaaagtatatggtcatggctggattttatctggtgatgaaaag
atgtcaaaatcaaaaggaaatattcttgatccattagatattattgaaatttatggactt
gacccattaagatattatttgattaaagaagtttcatttggaaatgatggtaatatttct
caagatagattagaggattgtatcaatagtgatttggctaataattatggtaatttatgt
caaagagtgactgcatttgctgagaagaattgctcttcattagtaccagataatacaaaa
tttaatgatgaagatttagtgatgctaaataaatttactgataatttagatctaataaga
actgaaattgataatcaaaatattaattattatattaatttcattgttagcgctttattt
gaagcaaataagtattttaacgatcaagagccttggaaaaaaaaagatgataaagataga
ttaaataccattgtctatacatctttagaaatgattagaaaaatttcatttatgctttat
ccaataattccaagctcaatagaaaaagccttaaagatttttaatttaaatattgatgcg
attaatttggaatctattgcaaaacatgactatctaatatctggtaaacctatcaacaaa
atagatattttgtttaaaaaaattgaaaaaaaacatgattga
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