Candidatus Pelagibacter ubique: SAR11_1019
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Entry
SAR11_1019 CDS
T00257
Symbol
xerD
Name
(GenBank) Integrase/recombinase xerD-like protein
Organism
pub
Candidatus Pelagibacter ubique
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
AAZ21826
UniProt:
Q4FLW2
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All DBs
Position
complement(997872..998828)
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AA seq
318 aa
AA seq
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MNEIITDINALKKETLLNLQSSKSINTARAYKSDFTDFSLFCVKNGFKSLPSEPKIVSLY
LTYLSTKEVKMSTLKRRLVSIGVIHKLKGHYLDTKHPAIIENIMGIKRRKGSIQKGKKPL
LINNLKQIIDVIDQQKKEEIKKIRDRSIILIGFSGGFRRNEIVSLDFDDLDFVSEGLKIN
IKRSKTDQFGEGFTKALPYFDSSQYCPVVSLRNWLEISRIKSGSVFRRFIKGSKLSENRL
TDQTVALLIKEYLSMLGIDTKNYSGHSLRSGFATSAAESGVEERNIMAMTGHKSTEMVRR
YIKDANLFRNNALNKIKI
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaataataacagatataaatgccctaaagaaagaaacattattaaacctacaa
agttctaagtccatcaacactgcaagagcatataaatcagactttaccgattttagttta
ttttgtgtcaaaaatggatttaagtctctaccatctgagccaaaaatagtttcgttatac
ctaacttatttatcaacaaaagaagttaaaatgagcactttaaaacgaaggttagtatca
attggagttattcataagttaaaaggtcattatttggacacaaaacatcctgcaataatt
gaaaatattatgggtataaaaagaagaaaaggtagtattcaaaaagggaaaaaaccttta
ttaatcaataatttaaagcaaataattgatgtcatagatcaacaaaaaaaagaagaaatt
aaaaaaattagagataggtctataattttaataggcttttcaggtgggtttcgaagaaat
gagatagtttcattagactttgatgaccttgattttgtttcagaaggtttaaaaattaat
atcaagaggtctaaaacagaccaatttggtgaaggttttacaaaagcactaccctacttt
gacagctctcaatattgtcctgtagtctcattgagaaactggctagagatatcaaggata
aaatcaggctctgtatttagaagatttattaagggatcaaagttatcagaaaacagatta
acagatcaaacagtagctttgcttattaaggagtacttaagcatgttaggaatagatact
aagaattattcaggtcacagtctaagatctggatttgcaacatctgctgctgagtcaggc
gtggaagagcgaaatattatggcaatgacaggtcataaatcaacagaaatggtaagaaga
tatattaaggatgcaaatttatttagaaataatgcattaaacaaaataaaaatataa
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