Candidatus Pelagibacter ubique: SAR11_1052
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Entry
SAR11_1052 CDS
T00257
Symbol
recO
Name
(GenBank) Recombination protein O
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pub
Candidatus Pelagibacter ubique
Pathway
pub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SAR11_1052 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pub03400
]
SAR11_1052 (recO)
DNA repair and recombination proteins [BR:
pub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SAR11_1052 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SAR11_1052 (recO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecO_N
RecO_C
PpPFK_gamma-like_C
SAC9_C
Ago_N_1
Gp34_C
Motif
Other DBs
NCBI-ProteinID:
AAZ21858
UniProt:
Q4FLT0
LinkDB
All DBs
Position
complement(1022169..1022849)
Genome browser
AA seq
226 aa
AA seq
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MNWDDSAYLVSKNRYSENSIIAEVFTENHGKISGIIFGGTSKKIKNYLQIGNKIYVNYNS
KSVTRIGYFKIEILKALTPLYFDQNQKLSCITSAMHLIKLLTAEAQSNKEIFKLIDKFFE
ILNSENWIQKYIFWELELLKLLGYDLELKTMAEKEIVDSEVNYYVKSSTEKKSIPNFLID
ENNMDVNLKNLLKGLKLVSDYLEKSILKPNNLNLPTSRTHFINLLK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaattgggacgatagcgcttatttagtttctaaaaatagatatagtgaaaattcaata
atcgctgaggtctttacagaaaaccatggaaaaatctcagggataatttttggtgggact
tcaaagaaaatcaaaaactacttgcaaattggtaataagatttatgtaaactataattct
aaaagtgttactagaattggttatttcaaaatagagattttaaaagccttaacaccgctc
tatttcgatcaaaatcagaaactatcatgcattacatcggcaatgcaccttataaaactt
cttactgctgaagcacaatctaataaagaaatttttaaattaattgataaattttttgaa
atattaaactctgaaaattggattcaaaaatatattttctgggagttagaacttttaaaa
ttattgggatatgatttggaattaaaaactatggctgaaaaagaaattgttgatagtgaa
gtcaattattacgttaaatcctcaactgaaaaaaaaagtattccaaattttttaatagat
gaaaataatatggatgttaatttaaaaaatttacttaaaggtctcaagcttgttagtgat
taccttgaaaaaagtattctaaaaccaaataatttaaatcttcctacttctagaactcat
tttattaatcttttaaaatag
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