Candidatus Pelagibacter ubique: SAR11_1284
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Entry
SAR11_1284 CDS
T00257
Symbol
soxB2
Name
(GenBank) sarcosine oxidase beta subunit
KO
K22084
methylglutamate dehydrogenase subunit A [EC:
1.5.99.5
]
Organism
pub
Candidatus Pelagibacter ubique
Pathway
pub00680
Methane metabolism
pub01100
Metabolic pathways
pub01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
SAR11_1284 (soxB2)
Enzymes [BR:
pub01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.99 With unknown physiological acceptors
1.5.99.5 methylglutamate dehydrogenase
SAR11_1284 (soxB2)
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Gene cluster
GFIT
Motif
Pfam:
DAO
Thi4
NAD_binding_8
Trp_halogenase
Pyr_redox_2
FAD_binding_2
Pyr_redox_3
FAD_oxidored
HI0933_like
NAD_binding_9
FAD_binding_3
Sacchrp_dh_NADP
Lycopene_cycl
MCRA
Motif
Other DBs
NCBI-ProteinID:
AAZ22088
UniProt:
Q4FL50
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All DBs
Position
complement(1217571..1218827)
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AA seq
418 aa
AA seq
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MQKYSIFNLIKNAFSGHQNWDLAWKDPTPKKEYDVVIIGGGGHGLATAYYLAKEHNITNV
AIIEKGWIGGGNVGRNTTIIRSNYMHDDNALFSEFGMDLWRKMSQDLNYNVMFSPRGIIN
LAHSDAQMNVFARRGNSMRLNGIDAVLLNREEVKEIIPMADFSDNVRFPIFGGLMQPSAG
TARHDAVAWGYARQADSMGVDIIQNCEVTGFDVVGGKIQGVRTSRGDIKVKKIGLCVAGS
TNILAEKLNMTVPIETHLLQACVSEPVKPVLDKVVTFGAGHFYISQSDKGEMVMGGDLDG
YNSYAQRGNLPTLQHVLTEGIAMMPFLSKLKMLRTWGGIMDMSMDGSPIIDKTHIEGLYL
NCGWCYGGFKATPASGWTFAHTIAQDRVHKLNAGYSLNRFHTGHLLDEKGLGTKTWIS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaatattctatatttaatttgatcaaaaatgccttctctggtcatcaaaattgg
gatttggcctggaaagatccaactcctaaaaaagaatatgatgtggttataattggtgga
ggtggtcacggcctagcaactgcttattatttagctaaagagcacaatattacaaacgtt
gctatcattgaaaaaggttggatcgggggtggaaatgttggaagaaataccacaatcatt
agatcaaactacatgcatgacgataatgcattgttcagtgagtttggaatggatttgtgg
agaaagatgagccaggatttaaactacaatgtaatgttttctccaagaggaattattaac
cttgctcactcagatgcccagatgaatgttttcgcaaggagaggaaactcaatgcgatta
aatggtatcgatgcagttttattaaatagagaagaggtaaaagaaattattccaatggct
gacttttcagacaatgtaaggtttcctatatttggtggactgatgcaaccaagcgctgga
acagcaaggcatgatgctgttgcatggggttatgcacgtcaagcagattcaatgggtgta
gatattattcaaaattgtgaagtaacaggttttgatgttgtaggtggaaaaattcaagga
gttagaacttcacgaggagatattaaagttaaaaaaattggactgtgtgttgcaggtagt
acaaatattttagcagagaaattaaatatgacagtaccaattgaaacacatcttttacaa
gcttgtgtttcagaaccagttaaacctgttttagataaagttgtaacttttggtgcagga
cacttttatattagtcagtcggataaaggtgagatggtaatgggaggagatttggatggc
tataatagctatgcgcaaagaggaaaccttccaacccttcaacatgttttaactgaagga
attgcgatgatgccttttcttagcaaactaaaaatgcttcgaacttggggtgggataatg
gatatgtctatggacggctcacctataatagataaaactcatattgaaggattatattta
aattgtggatggtgttatggtggatttaaagcaacaccagcatcaggatggacatttgca
catacaattgcacaagatagagttcacaaattaaatgctggatatagtttaaatagattt
cacacaggtcacttattagatgaaaaaggacttggaactaaaacgtggatttcataa
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