Candidatus Pelagibacter ubique: SAR11_1318
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Entry
SAR11_1318 CDS
T00257
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photolyase (DNA photolyase) (Photoreactivating enzyme)
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pub
Candidatus Pelagibacter ubique
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pub03400
]
SAR11_1318 (phrB)
Enzymes [BR:
pub01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SAR11_1318 (phrB)
DNA repair and recombination proteins [BR:
pub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SAR11_1318 (phrB)
Prokaryotic type
SAR11_1318 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
STAT2_C
Motif
Other DBs
NCBI-ProteinID:
AAZ22122
UniProt:
Q4FL16
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All DBs
Position
1253122..1254543
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AA seq
473 aa
AA seq
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MTKKAIVWIREDFRIEYNEALATATQNHEYVSAIYIYNPKNFDKKREAQKWWLSKSLENL
SIDLKKLNITLEVQLGDELEVLSILKKKDDVTVYWSKVYEPDVINKGKKIRDLFIKNEIQ
YKYFKGNILVEFQEMTKDDGTPYKVFTPFWKKTEQHYISKAPSKLIRVKSKIKKINIFKN
SISIKEILPKKNWHKKFEKYWDPSEKEAKKYLQELINNKIEDYGDARDIPGVNGTSKLSP
FLKFGQIHVETIWKKCQDIKVKKIGYRKYINELGWREFSHSLINYFPQMLKGNLRKDFDN
FPWVKNDKFLKAWKAGMTGYPIVDAGMRELYETGWMHNRVRMIVASFLVKHLRIHWMEGE
KHFKNCLVDYNEASNVAQWQWVAGCGADAAPYFRIFNPILQGEKFDKDGIYTKKWVPELK
NMPNKFLYKPWELETKYQEQIKVIVGINYPKPIIDHVEARNAALDAFKTIKKN
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaagccattgtttggattagagaagattttagaattgaatataacgaagcc
ttagcgacagcaactcaaaatcatgagtatgtaagtgctatttatatatataacccaaaa
aactttgataaaaaaagagaggcccaaaaatggtggctgtctaaatcattagaaaattta
agtatagatctaaagaaattaaatatcacattggaagttcagttaggtgatgaactagag
gtattatcaattttaaaaaagaaagatgatgttactgtttattggagtaaggtttatgag
ccagatgtaattaataaaggtaaaaaaataagagatctatttattaagaatgaaattcaa
tataaatattttaaaggaaacattcttgtagaatttcaagaaatgactaaagacgatggc
actccctataaagtattcactccattttggaaaaaaactgaacagcactatatttcaaaa
gctccttcaaaattaatacgagttaaatcaaaaattaaaaagataaacatattcaaaaat
tcaatttctataaaagaaattttgcctaaaaaaaattggcataaaaaatttgagaaatac
tgggacccatctgaaaaagaagctaaaaaatatttacaagaattaataaataataaaatt
gaggactatggtgacgcacgagatattccaggtgttaatggaacctccaagttatctcct
ttcttaaaatttggtcaaatacatgtagaaacaatttggaagaaatgccaagacattaaa
gttaaaaaaattggatatagaaagtatattaatgaattaggatggagagaattttctcat
agtttaattaattactttccacaaatgttaaaaggtaatcttagaaaagattttgacaat
tttccttgggttaaaaatgataaatttcttaaagcttggaaagcaggcatgacaggatac
cctattgtagatgctggaatgagagaactatacgaaacaggatggatgcacaatagagtt
cgaatgattgttgcttcttttcttgttaagcatttaagaattcattggatggagggtgaa
aaacattttaaaaattgtttagttgattataatgaagctagtaacgttgctcaatggcaa
tgggttgcaggatgtggtgcagatgcagctccctactttagaatcttcaatcctattctc
cagggtgaaaaatttgacaaagatgggatttatacaaaaaagtgggttcctgaacttaaa
aacatgcctaataaatttttatacaagccatgggaacttgaaaccaaataccaagaacag
attaaagtaattgttggtatcaactatccaaaaccaattatagatcacgttgaagcaaga
aatgctgctctagatgcttttaaaacaattaaaaaaaactaa
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