Panthera uncia (snow leopard): 125909896
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Entry
125909896 CDS
T08832
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc04140
Autophagy - animal
puc04148
Efferocytosis
puc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125909896
04148 Efferocytosis
125909896
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125909896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
puc04131
]
125909896
Membrane trafficking [BR:
puc04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
125909896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
Beta-prop_RIG_2nd
Lgl_C
SAM_CEP-1_C
DUF4145
Motif
Other DBs
NCBI-GeneID:
125909896
NCBI-ProteinID:
XP_049469378
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Position
B3
Genome browser
AA seq
875 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDAGCNRFEVTLEKSNK
NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLEHTETGE
EVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVD
GKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAME
HQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPM
ATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQKRFDESMQVFAK
LGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYLTQKRSQLVKKL
NDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE
SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENL
HLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLVENFKSLAIPYLEHVIHVW
EETGSQFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGEEEGELGEYRRKLLIFLEIS
GYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTKMAEEYCHKHYDQNK
DGNKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLELHHSKLDTTKAINLL
PANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKV
CMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgccttcgagccagtgccgatcctggaaaagctgcctctgcagatcgactgt
ctggctgcctgggaggaatggcttcttgttggcaccaaacaaggacatcttcttctctat
aggatccggaaagatgctggttgcaacaggtttgaagtgacactagagaaatccaataaa
aacttctccaaaaagattcaacagatccatgtggtttcccagtttaagattctggtcagc
ttgttagaaaataacatttatgtccatgacctgttgacatttcaacaaatcactacggtt
tcaaaggcaaagggagcatcactgttcacatgtgaccttgagcacacagagactggtgag
gaggtgttgcggatgtgtgtggcagtgaaaaagaagctgcagctctatttctggaaggac
agggaatttcacgaattgcagggggactttagtgtaccagatgtgcccaagtccatggca
tggtgtgaaaattctatctgtgtgggtttcaagagagactactacctaataagggtggat
ggaaaggggtccatcaaagagctctttccaacaggaaaacagctggagccgttagttgca
cctctggcagatggaaaagtggctgtgggtcaggatgatctcaccgtggtgctcaatgag
gaggggatatgcacacagaagtgtgccttgaactggacagacataccagtggccatggag
caccagcctccctacatcattgcagttttgcctcgatatgtggagatccgaacattcgaa
ccgaggcttctggtccagagtattgaattgcaaaggccccgcttcattacctcgggagga
tcaaatattatctatgtggccagcaatcattttgtttggagactcattcctgtccccatg
gcaacccaaatccaacagcttctccaggacaagcagtttgaactggctctacagcttgca
gaaatgaaagatgattccgacagtgaaaagcagcaacagatccatcacattaagaacttg
tatgccttcaacctcttctgccagaagcgttttgatgagtccatgcaggtctttgctaag
cttggcacagatcctacccatgtgatgggcctgtacccggacctgctgcccacagactac
aggaaacagctgcagtaccctaacccactgcctgtgctctcgggggctgaattggagaag
gcacacttagctctgattgactacctgacacagaaacgaagccaactggtaaagaagctg
aatgactctgatcaccagtctagcacctccccgcttatggaaggcactcccaccattaaa
tccaagaagaagctgttgcaaatcatcgacaccaccttgctcaagtgctacctgcatacg
aacgtggccctggtggcccctctgctgcgcctggagaacaatcactgccacatcgaagag
agcgagcatgtgctgaagaaggcgcacaagtacagcgaactgataatcctgtatgagaag
aaggggctccatgagaaagctctgcaggtgctggtggaccagtccaagaaagcaaactcc
cctctgaaaggccatgagaggaccgtgcagtatctgcaacatttgggcacagaaaacctg
catttgattttttcctactcagtgtgggtgctgcgagacttcccagaggatggcctgaag
atatttaccgaagatctcccagaggtagagtccctgccacgagaccgagtgcttggcttc
ttggtggagaattttaagagtctggctattccttatctggaacatgtcatccacgtttgg
gaggagacaggctctcagttccacaactgcctaatccagctgtactgtgagaaggtgcaa
ggtctgatgaaagagtatctcctgtccttccctgcaggcaaaactccagttcctgctgga
gaggaagaaggtgagctgggagaataccgacggaagctccttatattcttggaaatttct
ggctactatgatccaggccggctcatctgtgacttcccttttgatggcctcttagaagag
cgcgcactgctgctggggcgcatggggaagcatgagcaagccctcttcatctacgtccac
atcctgaaggacacaaagatggctgaggagtactgccacaaacattatgaccaaaataaa
gatggcaacaaagatgtgtatctgtccctgctccggatgtacctgtcaccccccagtgtt
cactgcctgggaccaatcaagctggaactgctggagccacaagccaacctccaggctgcc
ctgcaggtcctcgagctgcaccacagcaagctggacaccactaaggccatcaaccttctc
ccagcaaacactcagattaatgatatacgcatctttctggaaaaggtcttggaagaaaat
gcacaaaagaaacggttcaatcaagtgctcaagaaccttctccatgcggaatttctgagg
gtccaggaagagaggattttacaccagcaggtgaagtgcatcatcaccgaggagaaggtg
tgcatggtgtgtaagaagaagatcgggaacagtgcatttgcaagataccccaatggcgtg
gtcgtgcactacttctgttccaaagaggtaaacccagctgacacctga
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