Panthera uncia (snow leopard): 125911618
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Entry
125911618 CDS
T08832
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125911618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
puc03041
]
125911618
Spliceosome [BR:
puc03041
]
Complex A
U1 snRNP components
U1 related factors
125911618
Complex B
125911618
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
FF_RHG35_4th
CEP164_N
WW_2
Motif
Other DBs
NCBI-GeneID:
125911618
NCBI-ProteinID:
XP_049471588
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All DBs
Position
C1
Genome browser
AA seq
1040 aa
AA seq
DB search
MQATPSEAEAGGESPKSCVSTAHSDWTAGKPVSLLAPLIPPRSAGQPLTFGPSGRQPLRS
LLVGMCSGSGRRRSSLSPTMRPGTGAERGGLMVSEMENHPPSRGPGDGERRLSGSSLCSS
SWVSADGFLRRRPSMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMP
GMMSSVMPGMMMSHMSQASMQPALPPGVNNMDVAAGTASGAKSMWTEHKSPDGRTYYYNT
ETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGY
QNTIVAGSLITKSNLHAMIKAEETSKQEECTTTSTAPVPTTEIPTTMSTMAAAEAAAAVV
AAAAAAAAAAAAANASASTSASNTVGGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQ
LTSTPAVQDQSMEVSSNTGEETAKQEAVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFK
ELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYK
EAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKE
QAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICF
EEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTIS
SDIRFTNMLGQPVFSLGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFE
DFVAIISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQA
TPPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKK
SKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSK
KRRHKSDSPESDAERDKDKKEKDRESEKDRTRQRSESKHKSPKKKTGKDSGNWDTSGSEL
SEGELEKRRRTLLEQLDDDQ
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacgccaagtgaggctgaggctgggggcgaatcgccgaagagctgcgtgtcg
acagcgcactctgattggacagcggggaagcctgtcagcttattggccccgctgatcccg
ccccgtagcgcagggcagcctttaacctttggccccagcgggcgccagccactcagatcg
cttcttgttggtatgtgtagcggcagtggccgccggcggagcagtctgagcccgacgatg
aggccggggacgggagctgagcgtggaggcctcatggtgagtgaaatggagaaccatcct
ccttcgcggggtcccggggacggggagcggagattgtccggctcaagcctctgctccagc
tcttgggtctctgctgacggcttcctgaggagacggccctcgatggggcaccctggcatg
cattatgccccaatgggaatgcaccctatgggtcagagagccaatatgcctcctgtacct
catggaatgatgccgcaaatgatgccccctatgggagggccgccaatgggacaaatgcct
ggaatgatgtcttcagtaatgcctggaatgatgatgtctcatatgtctcaagcttccatg
cagcctgccttaccgccaggagtaaataatatggatgtagcagctggtacagcatctggt
gcaaaatcaatgtggaccgaacataaatcacctgatggaagaacttactactacaatact
gaaacaaaacagtctacttgggagaaaccggatgatctgaaaacacctgctgagcaactt
ttatctaaatgtccctggaaggaatacaaatctgactctggaaaaccttactattataat
tctcaaacaaaagaatcccgctgggccaaacctaaagaacttgaggatcttgaaggatac
cagaataccattgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaa
gctgaagaaaccagtaagcaagaagagtgcaccacaacatcaacagccccagttcctaca
accgaaattccgaccacaatgagcaccatggctgccgcagaagctgcagccgctgttgtt
gcagccgcagcggcagctgctgccgctgctgctgcagccaatgccagtgcttccacctct
gcttctaatactgtgggtggaactgttccagttgttcctgagcctgaggttacttcgatt
gttgctactgttgtagataacgaaaatacagtaacaatttcaactgaagaacaagcacaa
cttactagtactcctgctgttcaggatcagagtatggaagtatccagtaatactggagaa
gaaacagctaagcaggaagcagtagctgattttactcccaaaaaagaagaggaggaaagc
caaccagcaaaaaaaacctatacttggaatacaaaggaggaggcaaagcaagcatttaaa
gaattattaaaagaaaagcgagtaccatctaatgcttcatgggaacaagctatgaaaatg
atcattaatgatccacgatacagtgctttagcaaagttgagtgaaaaaaagcaggccttt
aatgcttacaaagtccagacagagaaagaagaaaaagaagaagcaagatcgaaatacaaa
gaagctaaggaatcctttcagcgttttcttgaaaatcatgagaaaatgacttccacaacc
agatacaaaaaagcagagcaaatgtttggagagatggaagtctggaatgcaatatcagaa
cgtgatcgtcttgaaatctatgaagatgttttattctttctttcaaaaaaagaaaaggag
caagcaaagcagttacgaaagagaaattgggaagccttaaaaaacatacttgacaacatg
gctaatgtaacatactctactacgtggtctgaagcacagcagtatctgatggataatcca
acctttgcagaagatgaggaattgcagaacatggataaagaagatgcattaatttgcttt
gaagaacacatccgagctttagaaaaggaagaagaagaagaaaaacaaaagagtttgctg
agggaaaggagacgacagcgtaaaaatagagaatcttttcagatatttttagatgaactg
catgaacatggacaactgcattctatgtcatcttggatggaattgtatccaacaattagt
tccgacatcagattcactaatatgcttggtcagccggttttttcattaggatcaactgca
cttgaccttttcaagttttatgttgaggatcttaaagcacgttatcatgatgagaagaag
atcataaaagacattttaaaggataaaggatttgtagttgaagtgaatactacttttgaa
gacttcgtggccataatcagttcaactaaaagatcaaccacattagatgccggaaatatt
aagttggctttcaatagtttactagaaaaagcagaagcccgtgaacgtgaacgagaaaaa
gaggaggctcggaagatgaaacgaaaagaatctgcgtttaagagtatgttgaaacaagct
actcctccaatagaattggatgctgtctgggaagatatccgggagagatttgtaaaagag
ccagcatttgaggatataactctagagtctgaaagaaaacgaatatttaaagattttatg
catgtgcttgagcatgaatgtcaacatcatcattcaaagaacaagaaacattctaaaaaa
tctaaaaaacatcacaggaaacgttcccgctctagatcggggtcagattcagatgatgat
gacagccactcaaagaaaaaaagacagcgatcagagtctcggtctgcttcagaacattct
tctagtgctgaatctgagagaagttataagaagtcaaaaaaacataagaagaaaagcaag
aagaggagacataaatctgactctccagagtctgatgctgagcgagacaaggataaaaaa
gaaaaagaccgagaaagtgaaaaagacagaactagacaaagatcagaatcaaaacacaaa
tcacctaagaaaaagactggaaaggattctgggaattgggatacttctggcagtgagctg
agtgaaggggaattggaaaagcgcagaaggacccttctggagcaactggatgatgatcaa
taa
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