Panthera uncia (snow leopard): 125911705
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Entry
125911705 CDS
T08832
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125911705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
puc03019
]
125911705
Messenger RNA biogenesis [BR:
puc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125911705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
ASA1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
CFAP251_N
Beta-prop_EIPR1
Collagen
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
eIF2A
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_NOL10_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
125911705
NCBI-ProteinID:
XP_049471735
LinkDB
All DBs
Position
C1
Genome browser
AA seq
1330 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMRAVQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQAEQIQPPPSSGTPLLGPQPFPGQGPMSQIPQG
FQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQG
PPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGNSGPQGHMGPQGPPGPQGHIGPQ
GPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGIQGPVSQGPLMGLN
PRGMQGPPGPRENQGPAPQGMMMGHPPQEMRGPHPPSGLLGHGPQEMRGMQGPPAQGSML
GPPQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPIPFQQQK
TALLGDGPRAPFNQEGQNAGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSRGPPNHH
MGPMSERRHEQSSGPEHGPERGPFRGGQDCRGPPDRRGPHPDFPDDFSRPDDFHPDKRFG
HRLREFEGRGGPLPQEEKWRRGGPGPPFPPDHREFSEGDGRGAARGPPGAWEGRRPGDER
FPRDPEDPRFRGRREESFRRGAPPRHEGRAPPRGRDGFPGPEDFGPEENFDPSDESARGR
DLRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGPGHEHFRDAPRPDHPPH
DGHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSEHREMEAPGGPSEDRGGKGRGGPG
PSQRVPKSGRSSSLDGDHHDGYHRDEPFGGPPGSGTPSRGGRSSSNWGRGSNMNSGPPRR
GASRGGGRGR
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggctacagaaattggttctcctcctcgttttttccatatgccaaggttccaacaccaa
gcacctcgacaactcttttataagcgacctgattttgcccagcagcaagcaatgcaacag
cttacttttgatggaaaacggatgaggaaagcagtaaaccgaaaaaccatagactataat
ccatctgtaattaagtatttggagaatagaatatggcaaagagaccagagagacatgcgg
gcagttcagcctgacgcaggttattataatgatctggtcccacctatagggatgttgaat
aatcctatgaatgcagtaacaacaaaatttgttcgaacatcaacaaataaagtaaagtgt
cccgtatttgttgttaggtggactccagaaggaagacgtttggtcactggagcttctagt
ggagagttcactttgtggaatggactcaccttcaattttgaaacaatattacaggctcat
gatagcccagtgagggccatgacttggtcacataatgacatgtggatgttgacagcagac
catggaggatatgtgaaatattggcagtcgaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttcttcgttgccatgaggaaagaattctc
cgagggcatggtgcagatgtgaaatgtgtagactggcatccaacaaaagggttagttgtt
tcaggaagtaaagatagtcaacaaccaatcaagttctgggatcccaagacgggacagagt
cttgcaacacttcacgcccataaaaacacagtaatggaagtgaaattaaatctcaatggc
aattggctgctcaccgcatcacgtgaccacctctgcaaactttttgatatccgaaacctg
aaagaagagcttcaagtcttccgaggtcacaagaaagaagccacagccgtggcctggcat
cctgttcacgaaggactatttgccagtggcgggtccgatggctctttgttattctggcat
gtgggggtagagaaggaagtgggtgggatggagatggcccatgaaggaatgatctggagt
ctggcgtggcatcctcttggacatattctctgctcaggttcaaatgaccatactagcaaa
ttttggacccgaaaccgaccaggtgataaaatgcgagatcgatataatctcaacctattg
cctggaatgtctgaagatggagtagaatatgatgaccttgaacctaatagtctggcagta
attccaggaatgggaataccagaacaactaaaactggctatggaacaggagcagatgggg
aaagatgagtcaaatgaaattgagatgacaattccaggtttggactggggaatggaggag
gtgatgcaaaaggatcagaaaaaagttcctcagaagaaagttccatatgcaaaacctatt
cctgctcagttccagcaggcgtggatgcaaaataaagttccaattcctgccccaaatgag
gtactgaatgacagaaaagaggacattaaattggaagagaagaagaaaacacaagcggaa
attgaacaagaaatggccacgttacagtatactaacccacagcttctggagcaacttaaa
attgaaagacttgcacagaaacaggctgagcaaattcagcctcctccttcatctggcact
cctctcctcggaccccagccctttccaggacaaggtccaatgtctcagattcctcaaggt
tttcaacaaccccatccatctcagcagatgccaatgaacatggctcaaatggggccaccg
gggccgcagggacagtttagaccccctggaccccagggacaaatgggaccacaaggtcct
ccactgcatcagggaggtggggggccacaaggattcatgggaccacaagggccccagggc
ccaccccaggggttgccgaggcctcaggacatgcatgggccccaaggaatgcaaaggcat
cctggacctcatggccctttgggacctcaaggtccacctggaccacagggtaattctggt
cctcaaggtcatatggggcctcagggtccacctggcccacaaggtcacataggcccccaa
ggcccacctggtccccagggtcacttgggccctcaggggcctcctggtactcaaggtatg
cagggaccacctggtcccagaggaatgcaaggacctcctcaccctcatgggatccaaggt
gggccagggtctcaagggatccaaggtcctgtgtctcagggacctctgatgggattgaat
ccaagaggaatgcagggtcctccaggcccccgagagaaccagggtcctgctccccaaggg
atgatgatgggccacccgcctcaagagatgagaggacctcaccctccaagtggactgctg
ggacacggccctcaggagatgcgaggcatgcaggggcctccagcccaagggtccatgcta
ggccctccccaggaattgcgggggcctccaggctcacaaggtcagcaggggccgccccag
ggctctttggggcctccaccccagggtggcatgcaagggccccctggacctcagggacag
cagaacccggcaagagggccacatccatctcaagggccaataccattccagcagcagaaa
acagctctgctaggtgatgggcctcgggcccccttcaatcaggaaggacagaacgcaggc
cccccacccctgataccaggcctagggcagcagggagcacaaggtcgcatcccccctctt
aaccctggacaaggacctggccctaacaaaggtgactcacgcggccctccaaaccaccac
atgggccccatgtcagagaggcggcatgagcagagcagcggccctgagcacgggcctgag
agggggcctttccggggcggccaggactgcaggggtccccctgataggcgtggccctcac
cccgacttccctgacgacttcagcagaccagatgacttccacccggacaaacgctttggc
caccgattacgtgaatttgaggggcgaggaggacctttaccacaagaagagaagtggagg
cgcgggggccccgggcctccgtttccgcctgatcacagggaattcagcgagggggatggc
cggggcgcagctcggggccctccgggggcttgggaaggccgcagacctggagatgaacga
ttcccccgggatcctgaggacccacgttttcgagggcgcagagaagaaagctttagaaga
ggagcacccccaagacatgaaggccgtgccccgccccgaggtagggatggctttcctggt
cctgaagactttggtccagaggagaattttgatccttctgatgaatcggcccgaggaaga
gatctccgaggtcgaggtcggggtaccccgcgaggaggaaggaagggtttgctccccact
cctgatgagttccctcgctttgaaggaggacggaaaccagactcctgggatggaaataga
gagccagggccaggtcatgaacatttccgtgatgctccgcgccctgatcatccccctcac
gacggtcattccccagctagcagagaacgttcctcttctctgcagggcatggacatggca
tccctgccaccccgaaagcgcccctggcacgacgggccggggacctcggagcacagagaa
atggaagccccggggggtccgtctgaggatcgaggaggcaaaggccgagggggcccagga
ccttcccagagagtgccaaaatctgggcgctccagctccttggatggggatcaccacgac
ggctaccacagagatgaaccttttgggggccctccgggcagcggtactccttccagaggg
ggccggagcagcagtaactggggtagagggagtaacatgaactctggcccgccacggcga
ggagcttcaaggggtggtggaaggggtcggtag
DBGET
integrated database retrieval system
