Panthera uncia (snow leopard): 125912980
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Entry
125912980 CDS
T08832
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
puc
Panthera uncia (snow leopard)
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
puc03000
]
125912980
Transcription factors [BR:
puc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125912980
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
125912980
NCBI-ProteinID:
XP_049473806
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All DBs
Position
D1:40573300..41260845
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AA seq
883 aa
AA seq
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MPSSSEVLADVVRESRIEEWKSSHFIRMSSKQATSPFACAADGEEAMTQDLTSREKEEGS
DQHVASHLPLHPIMHNKPHSEELPTLVNTIQQDADWDAVLSSQQRMESENNKLCSLYSFR
NTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCM
EKLLSKDWKEKMERLNTSELLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQK
KLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIF
PHDQRTLAAAAAAQQGFLFPPGITYKPGDNYPVQFISSTMAAAATSGLSPLQLQKGHVSH
PQINPRLKGLSDRFGRSLDTFEHGGGHSYNHKQIEQLYAAQLASMQVSPGAKMPSAPQPP
NTAGAVSPTGIKNEKRGASPVTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQSLFPASK
TSPVNLPNKSSIPSPIGGSLGRGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQR
EQQQQQPHGVDGKLSSMNNMGLNNCRNEKITGANPTERRCAVPPGRLPGTGFLSLQERTR
FENLGPQLTGKSSEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEA
RVYRDARSRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQ
EKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFF
TVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKTD
GGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVSAN
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgagttctgaagttctggctgatgtggtaagagaaagccgtattgaagagtgg
aagagcagccacttcataagaatgtcttccaagcaagccacctctccatttgcctgtgca
gctgatggagaggaagccatgacccaagatttgacctcaagggaaaaggaagagggcagt
gatcaacatgtggcctcccatctgcctctgcaccccataatgcacaacaaacctcactct
gaggagctaccaacacttgtcaataccattcaacaagatgctgactgggacgctgttctg
tcgtctcagcaaagaatggagtcagagaataataagttatgttccctatattccttccga
aatacctctacctcaccacataagcctgacgaagggagtcgggaccgcgagataatgacc
agtgttacttttggaaccccagaacgccgcaaaggaagccttgccgatgtggtggacaca
ctgaaacagaagaagcttgaggaaatgactcggactgaacaagaggattcctcctgcatg
gaaaaactactttcaaaagattggaaggaaaaaatggaaagactaaataccagtgaactt
cttggagaaattaaaggtacacctgagagcctggcagagaaagaacggcaactctctact
atgattacccagctgatcagtttacgggagcagctcttggcagcgcatgatgaacagaaa
aaactggcagcctcacaaattgagaaacaacggcagcaaatggaccttgctcgccaacag
caagaacagattgcaagacaacagcagcaacttctgcagcagcagcacaaaattaatctc
ctgcagcaacagatccagcaggttcagggtcacatgcctccgctcatgatcccaattttt
ccacatgaccagcggaccctggcagcagctgctgccgcccagcagggcttcctcttcccc
cctggaataacatacaaaccaggtgataactaccctgtacagttcatttcatcaacaatg
gcagctgctgctacttctggactcagccctttacagctccagaagggtcatgtctcccac
ccacaaattaacccaaggctaaagggcctaagtgaccgttttggcaggagtttggacacc
tttgaacatggtggtggccactcttacaaccacaaacagattgagcagctctatgccgct
cagctggccagcatgcaggtgtcacctggagcaaagatgccatccgctccacagccacca
aacacagcaggggcagtctcacctaccgggataaaaaatgaaaagagaggggccagccct
gtaactcaagttaaggacgaagcagcagcacagccgctaaatctctcttcccgacccaag
acagccgagcctgtaaagtccccaacatctcccacccagagtctcttcccagccagcaaa
accagccccgttaatctgcctaacaaaagcagcatccccagccccattggaggaagtttg
ggaagaggatcctctttagatatcctgtccagtctcaactcccctgccctgtttggagat
caggacacagtgatgaaagccattcaggaggctcggaagatgcgagaacagatccagcgg
gagcaacaacagcaacagccacatggtgttgatgggaaactatcttccatgaacaatatg
gggctgaacaactgcaggaatgaaaagattactggagcaaatcccactgagagaagatgt
gcagtgccgcccggcaggcttcccggcacaggtttcctttccttacaggaaagaacacgc
tttgagaatttggggccccagttaacaggaaagtcaagtgaagatggaaagctgggccca
ggtgtcatcgatcttactcggccagaagatgcagagggaagtaaagcaatgaatggctct
gcagctaaactacagcagtattattgttggccaacaggaggcgccactgtggctgaagca
cgagtctacagggatgcccgcagccgggccagcagcgagccacacatcaagcgaccaatg
aatgctttcatggtttgggcgaaggatgagaggaggaaaatccttcaggccttccccgac
atgcataactccaacattagcaaaatcttagggtctcgctggaaatccatgtccaaccaa
gagaagcaaccttactatgaagagcaggcccggctaagcaagatccacttagagaagtac
ccgaactataaatacaaacctcgaccgaaacgcacctgcattgttgatggcaaaaagctc
cggatcggggaatataagcaactgatgaggtctcggagacaggagatgaggcagttcttt
accgtggggcaacagcctcagattccaatcaccacaggaacaggtgttgtgtatcctggt
gctattactatggcaactaccacaccgtcacctcagatgacatctgactgctctagcacc
tcggccagcccagagcccagcctcccagtcatccagagcacttatggtatgaagacagac
ggcggaagcctagctggaaacgaaatgattaatggagaggatgaaatggaaatgtatgac
gactatgaagatgaccccaaatcagactatagcagtgaaaatgaagccccggaagctgtc
agtgccaactga
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