Panthera uncia (snow leopard): 125913115
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Entry
125913115 CDS
T08832
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc03022
Basal transcription factors
puc03420
Nucleotide excision repair
puc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125913115
09124 Replication and repair
03420 Nucleotide excision repair
125913115
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
125913115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
puc03021
]
125913115
03400 DNA repair and recombination proteins [BR:
puc03400
]
125913115
Transcription machinery [BR:
puc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125913115
DNA repair and recombination proteins [BR:
puc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125913115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
125913115
NCBI-ProteinID:
XP_049474057
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All DBs
Position
D1:complement(39177981..39214965)
Genome browser
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLNINATESSSTSNHKQDVGISAAFLADVRPQTDG
CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK
DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSASNSKSIKENSN
AAIIKRFNHHSAMVLAAGLRKQEAQNEQNGEPSSIDGNSGDADCFQPAVKRAKLQESIEY
EDLGKNNSIKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQ
VLSSSAASSTITTLSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHKWQ
SRRLMKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcatctgaagaagttttgctaattgtaaagaaggtgcgtcaaaagaagcaa
gatggagctttatacctcatggcagaaaggattgcttgggcacctgaaggcaaagataga
tttacaatcagccatatgtatgcagatattaaatgccagaaaattagtccagaaggaaaa
gctaaaattcaacttcagctggtgttgcatgcaggggacacaactaacttccatttttcc
aatgaaagcacagctgtgaaagagcgagatgcagtgaaagaccttcttcagcagctgctg
cccaaattcaagaggaaagcaaataaagaactggaagagaaaaacagaatgctgcaagaa
gatcctgttttgtttcagctttataaagaccttgttgtgagtcaagtgatcagtgctgag
gaattctgggccaatcgtttaaatataaatgcgacagagagttcttctacatccaatcat
aagcaggatgttggcatttctgcagcatttctggctgatgtccggccccaaacagatgga
tgtaatggtctgagatacaatttaacctctgatatcattgagtccatatttaggacctat
ccagcagtaaaaatgaaatatgcagaaaatgttccccacaatatgacagaaaaggaattt
tggacacgtttttttcagtcccattattttcacagggaccggctgaatacagggtcaaaa
gacctctttgcagaatgtgccaaaatagatgaaaaagggttaaaaaccatggtttcacta
ggagtaaaaaacccactgcttgacttgacagctttggaagataaaccattagatgagggc
tatggcatttcttctgtgccatctgcttctaattccaaatccataaaggagaatagtaat
gctgccatcatcaagaggtttaaccatcacagtgccatggtcctggcagcaggtctcagg
aaacaagaagcacaaaatgaacaaaatggtgagcccagcagcattgatggaaattctgga
gatgcagattgcttccaaccagcagtcaaaagggcgaagttacaagagtccattgaatat
gaagacttgggaaaaaataattccataaaaacaattgcactaaacctcaagaagtcagat
aggtattatcatggtccaactccaatccagtcactacagtatgcaacaagtcaggacatt
attaattcttttcaaagtattaggcaagaaatggaagcttatacacccaaattaactcag
gttctctcaagtagtgctgccagcagtactatcacaacactgtcacctggaggagcactt
atgcagggagggacacagcaagccataaaccagatggtgccaaatgatattcagtctgag
ttgaaacacctgtatgtggctgttggggaacttctacggcacttctggtcctgctttccc
gttaatacaccattcctagaagaaaaggtagtgaaaatgaaaagtaatttggaacgattt
caagttacaaagctctgcccattccaagaaaaaattcggagacagtatttaagcacaaac
ttggtaagtcacatagaggagatgctccagacagcctacaacaagctccacaagtggcag
tcacggcgtctgatgaagaaaacgtga
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