Panthera uncia (snow leopard): 125914253
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Entry
125914253 CDS
T08832
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
puc
Panthera uncia (snow leopard)
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
puc03009
]
125914253
Enzymes [BR:
puc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125914253
Ribosome biogenesis [BR:
puc03009
]
Eukaryotic type
Pre-60S particles
Helicases
125914253
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
Cas3-like_C_2
SBF_like
Motif
Other DBs
NCBI-GeneID:
125914253
NCBI-ProteinID:
XP_049475450
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Position
D3
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AA seq
600 aa
AA seq
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MEHVTEGSWESLPMRLHPRVLGALRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKHQVGALIITPTRELAIQIDEVLAHFTKPFPQFSQILWIGG
RNPGEDVERFKEQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVESLVRAGLRNPVRISVKEKGVAASSTQKTPS
RLKNCYMVCKADEKFNQLVHFLRNHKQEKHLIFFSTCACVEYYGKALESLVKGVKIMCIH
GKMKHKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTA
RIGHGGSALVFLLPMEESYVSFLEINQKCPLQEMQLQKNTGDLLPKLKSMALADRAVFEK
GMKAFVSYVQAYAKHECGLIFRLKDLDFASLARGFALLRMPKMPELRGKQFPDFVPADVN
TDTIPFKDKIREKQRQKLLEQQRKEKRENEGRKKFIKNKAWSKQKAKKEKKKKMNEKRKR
EEGSDIEDEDMEELLNDTRLLRKFKKGKITEEEFEKGLLASGKRTVTTADVGIPAWEPDC
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtgacggagggctcctgggagtcgctgccgatgcggctgcacccgcgggtg
ctgggtgcgctgcgggagctgggcttcccgtacatgacgccggtgcagtctgcaaccatc
cctctgttcatgaaaaataaagatgtcgctgcagaggcggtcacgggtagtggcaaaaca
ctcgcttttgtcattcccatcctggagattcttctgagaagggaagagaagttaaaaaag
catcaggtgggagccttaatcatcacaccgacacgagagctggctattcagatagacgag
gtcctagcgcatttcacgaagcccttcccacagttcagccagattctctggatcggaggc
aggaatcctggagaagatgttgaaaggtttaaggagcaaggtgggaacatcattgtggcc
actccaggccgtttggaggacatgttccggaggaaggcagagggcttggatttggccagc
tgtgtgaggtccctcgacgtcctggtgttggatgaggcagacagacttctggacatgggg
tttgaggcaagcataaataccatcctggagtttttgccaaagcagaggagaacaggcctt
ttctccgccactcagacacaggaggtggagagcctggtgagagcggggctccggaacccc
gtgcggatctcggtgaaggagaagggcgtggcggccagcagcacccagaaaactccgtcc
cgcctgaagaactgctacatggtatgtaaggcagatgagaaatttaaccagctggtacat
tttcttcgaaaccataagcaggaaaagcacctgattttcttcagcacctgcgcctgtgtg
gaatactatggaaaggccctggaatccctggtgaagggtgtgaagatcatgtgcattcac
gggaagatgaaacataagcgtaacaagatcttcatggagttccgcaaattgcaaagtggg
attttagtgtgcacagatgtcatggcccgaggaatagatattcctgaagtaaactgggtt
ttgcagtacgaccctcccagcagcgcaagtgcctttgtgcatcgctgtggccgcacagcc
cgcatcggccacggtggcagtgcgctcgtgttcctccttcccatggaagagtcatacgtc
agtttccttgaaattaaccaaaaatgccccctgcaggagatgcaactccagaaaaacaca
ggagacctccttccaaagctcaagtccatggccctggctgacagagccgtgtttgaaaag
ggcatgaaagcctttgtgtcctacgtccaggcatatgccaagcacgaatgcggcctcatc
ttcagattaaaggatcttgattttgctagtcttgctcgagggtttgccctgctgaggatg
cccaagatgccagaactgagaggaaagcagtttccagattttgtgcctgcagatgttaat
acagacaccattccattcaaagataaaatcagagagaagcaaaggcagaagctactagag
caacagagaaaagagaaaagagaaaatgaagggagaaaaaaattcataaaaaataaagct
tggtcaaagcagaaggccaaaaaggagaagaagaagaaaatgaatgaaaaaaggaagagg
gaagagggttctgatatcgaagacgaggacatggaggaacttcttaatgacacgaggctc
ttgagaaagtttaagaaaggcaagattactgaagaagagtttgagaaggggttgttggcg
agcggcaagagaacagtcaccacagcagacgtggggatccccgcctgggaacctgactgc
tga
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