KEGG   Panthera uncia (snow leopard): 125914533
Entry
125914533         CDS       T08832                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
puc  Panthera uncia (snow leopard)
Pathway
puc03030  DNA replication
puc03410  Base excision repair
puc03420  Nucleotide excision repair
puc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:puc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    125914533
   03410 Base excision repair
    125914533
   03420 Nucleotide excision repair
    125914533
   03430 Mismatch repair
    125914533
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:puc03032]
    125914533
   03036 Chromosome and associated proteins [BR:puc03036]
    125914533
   03400 DNA repair and recombination proteins [BR:puc03400]
    125914533
DNA replication proteins [BR:puc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    125914533
  DNA Replication Termination Factors
   ELG1-RFC complex
    125914533
Chromosome and associated proteins [BR:puc03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    125914533
DNA repair and recombination proteins [BR:puc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     125914533
  Check point factors
   HRAD17(Rad24)-RFC complex
    125914533
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_24 AAA_11 AAA_22 AAA_16 AAA_assoc_2 RuvB_N DEAD AAA_14 DUF815 nSTAND_NTPase5 AAA_lid_RFC1 ResIII AAA_5 AAA_19 ATPase_2 TniB AAA_30 PhoH AAA_7 TIP49 nSTAND3 AraA_central Thioredoxin_6 bpMoxR NPHP3_N DNAX_ATPase_lid ABC_tran AAA_28
Other DBs
NCBI-GeneID: 125914533
NCBI-ProteinID: XP_049475848
LinkDB
Position
D3
AA seq 340 aa
METSAKKEQQQPAEAKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLLYG
PPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFK
LVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPE
LMVPRLEHVVDVEKVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTG
HPLKSDIANILDWMLNQDFTTAYRNITELKTLKGLALQDILTEIHLFVHRVDFPSSVRVH
LLTKMADIEYRLSVGTNEKIQLSSLIAAFQVTRDLIVTEA
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggagacctcagcgaagaaggagcagcagcagcccgcggaggccaagatcagaaacctg
ccctgggttgaaaaataccggccacagacactgaatgatctgatttctcatcaggacatt
ttgagtaccattcagaaatttattagcgaagaccgactgccgcacctgcttctctatggt
cctccagggacaggaaagacctctactatcctagcttgtgctaaacagctatacaaagat
aaggaatttggctccatggtcttggagctgaatgcttcagacgaccgaggaatagatatc
gttcggggaccaatcctgagctttgccagcacaaggacaatatttaagaaaggcttcaaa
ctagtgatcttggatgaagctgacgccatgactcaagacgcccagaacgccttgaggaga
gtgattgagaaatttaccgaaaatacccgcttttgcctcatctgtaactatctgtcaaag
atcatccccgccttgcagtcccgctgtacgaggttccgattcggtcctctgactcctgaa
ctcatggttccccgcctggaacatgttgtagatgtagagaaggtggacataagtgaggat
gggatgaaagcacttgtgactctttccagcggagatatgcgaagggctctgaacattctg
cagagcaccaatatggcctttgggaaggtgacagaggagaccgtctacacctgcactggg
cacccactcaagtcagacatcgccaacattctggactggatgttgaatcaagacttcaca
acagcctacagaaatattacagagttgaaaacgctgaaggggttggcattacaggacatc
ctgacagagatacacttgtttgtgcacagagttgactttccatcttcagttcgagtacat
ttattgaccaaaatggcagacattgagtacagactttctgttggcaccaacgagaagatt
cagctgagttccctcatagccgctttccaggtcaccagggacctgatcgtcacagaggcc
taa

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