Panthera uncia (snow leopard): 125915352
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Entry
125915352 CDS
T08832
Name
(RefSeq) symplekin isoform X1
KO
K06100
symplekin
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc03015
mRNA surveillance pathway
puc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125915352
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125915352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
puc03021
]
125915352
03019 Messenger RNA biogenesis [BR:
puc03019
]
125915352
Transcription machinery [BR:
puc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125915352
Messenger RNA biogenesis [BR:
puc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
125915352
U7-dependent histone pre-mRNA processing factors
125915352
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
AbiJ_NTD3
Motif
Other DBs
NCBI-GeneID:
125915352
NCBI-ProteinID:
XP_049477114
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All DBs
Position
E2
Genome browser
AA seq
1273 aa
AA seq
DB search
MAGSSGDSITRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEVPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSGKDARKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKPESVLIKRRLSAQGQAISVVGSLSSMSALEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGTLDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEASGKQEPEAKEVPAGPLEEDDLEPLALAPAPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGVGAPSSSSSSSSSSTRPGPPQPEETIDFREEGPECET
PAIFISMDDDSGLTEAALLDSSLEGPLPKEATGGLTSKEERSPQTLTPAGDDTVKTPSPA
AEESGEPETKGNS
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagcagcggagatagtatcactcgccggagtgtggcatcccagtttttcaca
caagaggaggggccgggcatcgatggcatgaccacctcagagagagtggtggatctcctg
aaccaggcggcgctgatcaccaatgactcgaagatcacagtactcaaacaggtccaggaa
ctgatcatcaacaaagatcccacactactggacaacttcctggacgagatcatcgctttc
caggcggacaagtcaattgaagtgcgcaaatttgtcatcggcttcatcgaggaggcatgc
aaacgagacattgagttactcctgaaactgatcgcaaacctcaacatgctcttgagggat
gagaatgtgaatgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcacgagtcatcagtgagctccaggaggcctgctgggacatg
gtgtccgccatggctggtgacatcattctgctgctggattctgacaatgacggcatccgc
acccacgccatcaagtttgtggagggcctcattgtcaccctgtcaccccgcatggcagac
tcggaggtgccccgccgccaggagcatgatatcagcctggaccgcatcccccgggaccac
ccctacatccagtacaatgtgctgtgggaagagggcaaggcagctttggagcagttgctc
aagttcatggtgcatcccgccatctcctccattaacctgaccacagctctgggctccctt
gccaacatcgcccgccagaggcccatgttcatgtcagaggtgatccaggcctacgaaacc
ctgcatgccaacctgccccctacgctggccaaatcccaggtgagcagcgtgcgcaagaac
ctcaagttgcacctgttgagtgtcctgaagcacccggcctccttggagtttcaggcccag
attaccaccctgctggtggacctaggcacacctcaggctgagattgcccgcaatatgccc
agcggcaaggatgcccgcaagcggccccgggacgactcggattccacactcaagaagatg
aagttagagcccaacctgggggaagatgacgaggacaaggacttggagccgggcccatcg
ggaacctccaaggcctcagcccagatctcaggccagtcggatacagacatcaccgccgag
ttcctgcagcctttgctgacacctgacaacgtggccaatctggtcctcatcagcatggtg
tacctgcccgaggccatgcccgcctccttccaagccatctatacccccgtggagtcagca
ggcaccgaagcccagatcaagcacctggctcggctcatggccacacagatgacggctgcg
ggactggggccaggtgtggagcagacgaaacagtgcaaggaggagcccaaggaggaaaag
gtggtgaagccagagagtgtcctgattaagcgacgcctgtcggcccagggccaggccatc
tcagtggtgggctccctgagctccatgtctgctctggaggaggaggcgccccaggccaag
aggaggccagagcccatcatccctgtcacacagccccggctggcgggcgctggtgggcgc
aagaaaatcttccgtctgagcgatgtgctcaagcccctgactgacgcccaggttgaggct
atgaagctgggcgccgtgaagcggatcctccgggcagagaaggccgtggcctgcagcggg
gcggcccaggtgcgcataaagatcctggccagtctggtgacacagtttgactcgggcctg
aaggccgaggtcttgtccttcatcctggaggatgtgcgggcccgcctggacttggccttc
gcttggctctaccaggagtacaatgcctacctggcagctggtgcctcgggcaccctggac
aagtacgaggactgccttatccgcctgctctccggcctgcaggagaagccagaccagaag
gatgggatcttcacgaaggttgtgctagaggcaccgctgatcactgagagcgccctggag
gtgattcgcaagtactgtgaggatgagagtcgcacttacctgggcatgtctactcttcga
gacctgatcttcaagcgcccgtcccgccagttccagtacctgcatgttctgctagacctc
agctcccacgagaaggacaaggtgcgttcccaggccctgctgttcatcaagcgcatgtac
gaaaaggagcagctgcgagagtatgtggagaaatttgccctcaactacctgcaactcctg
gtccaccccaacccgccatctgtgctgtttggagccgacaaggacacagaggtggcagcg
ccctggaccgaggagacagtaaagcagtgtctgtacctctacctggctctcctgcctcag
aaccacaagctgatccacgaactggccgccgtgtacactgaggccatcgctgacatcaag
cggacggtgctgagggtcatcgaacagccgatccgaggaatgggcatgaactcaccagag
ctgctcctgctggtagaaaactgtcccaagggggcagagacactggtcacacgatgtctg
cacagcctcacggacaaagtcccgccctccccggagctggtgaagcgggtccgggatctc
taccacaagcgattgccagatgtccgcttcctcatccctgtgctcaatggactggagaag
aaagaagtgatccaggccctgccaaagctcatcaaactcaaccccattgtggtgaaagag
gtcttcaaccgcctgctgggcacccagcacggtgaagggaactcggccttgtccccgctg
aaccctggagagctgcttattgcgttgcacaacattgactcggtgaagtgtgacatgaag
tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacgtcggaggtg
ctggccgtggtgatgcagcagctgatggagcagagccccctgcccatgctgctcatgagg
accgtcatccagtctctgaccatgtacccccgcctgggggggttcgtcatgaacatcctg
tcccgcctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaag
tgctgtcaacgcaccaagccccagagcttccaggtcatcctgcagttgccgccccagcag
ctgggtgccgtctttgacaagtgcccagagctccgggagcccctgctggcccacgtccga
tccttcaccccccaccagcaagcacacatccccaactccatcatgaccatcctggaggcc
agtggcaagcaggagccagaggccaaggaagtgcccgcggggcccctggaagaggacgac
ctggagcccctggccctggccccagccccagccccccggccccctcaggacctcatcggc
cttcggctggcccaggagaaagccttaaagcggcagctggaggaggaacagaagctgaag
ccaggaggagtgggagccccctcgtcctcctcctcgtcctcctcttcctccacccggcca
ggccctccccagcccgaggaaaccatagatttccgggaggaggggcctgagtgtgagacc
cccgccatcttcatcagcatggatgacgactcggggctgaccgaggccgcactcctggac
tctagtcttgaagggcccctaccgaaggaggcaacaggcgggttgacctcaaaggaggag
cgcagcccccagaccctcacccctgccggagacgataccgtgaagacccccagccccgcc
gccgaggaatccggggaacccgagaccaaggggaacagctga
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