KEGG   Panthera uncia (snow leopard): 125915619
Entry
125915619         CDS       T08832                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
puc  Panthera uncia (snow leopard)
Pathway
puc03030  DNA replication
puc03410  Base excision repair
puc03420  Nucleotide excision repair
puc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:puc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    125915619
   03410 Base excision repair
    125915619
   03420 Nucleotide excision repair
    125915619
   03430 Mismatch repair
    125915619
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:puc03032]
    125915619
   03400 DNA repair and recombination proteins [BR:puc03400]
    125915619
Enzymes [BR:puc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     125915619
    6.5.1.6  DNA ligase (ATP or NAD+)
     125915619
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     125915619
DNA replication proteins [BR:puc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    125915619
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     125915619
DNA repair and recombination proteins [BR:puc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     125915619
   NER (nucleotide excision repair)
    Other NER factors
     125915619
   MMR (mismatch excision repair)
    Other MMR factors
     125915619
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DDR PucR
Other DBs
NCBI-GeneID: 125915619
NCBI-ProteinID: XP_049477509
LinkDB
Position
E2
AA seq 912 aa
MQRSIMSFFHPKKEGKAKKPEKETSSREIEPPPKVALKERNGEVPENDSPVKRPGRKAAR
VLGSEGEEEDEALTPSKGQKPAPGSPQVSPPSPVTFPEGSPPLSNTSPAGLSPTGIPKRR
TARKQLPKRPIQDILEEQNEDEDREAKRKKEEAETPTESLTEPELAQKEEAEGDRPTTPA
EHLETSPAEPPTDSTSEPEVAGKQEAREGDQAKPPPRAPKTVSSFFAPRKPATKKEGKEE
GPGAPRKEEAKGPLDPPGYNPAKNNYHPVDDACWKPGQKVPYLAVARTFEKIEEVSARLR
MVETLSNLLRSVVALSPPDLLPILYLSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLE
SVKAEAAEKGDVGLVAENSRSTQRLMLPPPALTAAGVFAKFRDIAGLAGSASTAKKIDVI
KGLFVACRHSEARFIARALSGRLRLGLAEQSVLAALAQAVSLTPPGQDFPPAVVDAGKGR
TVEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLEHLPEHCRLSPGVPLKPMLAHP
TRGVSEILKRFEEAAFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPK
IKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDAADIQVQVCLYAFDLIYLNG
ESLVREPLSRRRQLLRENFVQTEGEFVFATSLDTKDTDQIAEFLEQSVKDSCEGLMVKTL
DVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDEES
EELQAICKLGTGFSDEELEDHFHSLQALVLPTPRSYVRADGAVAPDHWLDPSAVWEVKCA
DLSLSPIYPAARGLVDSEKGISLRFPRFIRVREDKKPEEATTSAQVASLFKKQSQIQNQQ
GADLDSDPEDFY
NT seq 2739 nt   +upstreamnt  +downstreamnt
atgcagcggagtatcatgtcatttttccaccccaagaaggagggcaaagcgaaaaagccg
gagaaagagacctccagcagagagatagagccacctccaaaggtggcgctgaaggaacgg
aacggagaggtgcctgagaacgattctccggtgaagaggccagggcggaaggcggcccgg
gtcctgggcagtgaaggggaggaggaggacgaagccctcacgccctccaaaggccagaag
ccggccccaggctctccacaggtctcccctcccagccctgtcacatttcccgagggcagc
cctcccctctccaacacctctcctgcgggcctctccccaacggggatcccgaagcggcgc
acagctcggaagcagcttcctaaacggccgattcaggatatcctggaagaacagaacgag
gatgaggacagagaggcaaagaggaagaaggaagaagcagagaccccaacagaaagcctc
acagagcctgaattggcccaaaaggaggaagcagaaggggaccggcccacgacgcccgct
gagcacttagagacctccccagccgagcccccgacagacagcacctcagagcctgaggtg
gccggaaagcaggaagcacgggagggggaccaggctaagcctccccccagagctcccaag
acggtcagcagtttcttcgccccccggaagccggcgaccaagaaagaagggaaagaagag
ggacctggcgcccctagaaaggaggaggccaaaggacccctggacccccccggctacaat
ccggccaagaacaactaccatcccgttgacgacgcctgctggaagccgggccagaaggtc
ccttacctggctgtggcccggacatttgagaagattgaggaggtttctgctcggctccgg
atggtggagacactgagcaacttgctgcgctccgtggtggccctgtcccccccagacctg
ctccccatcctctacctcagcctcaaccgcctcgggccgccccagcagggcctggagctt
ggcgtcggggacggtgtcctcctcaaggcggtggcccaggccacggggcggcagctggag
tccgtcaaggccgaggcggccgagaagggcgacgtggggctggtggccgagaacagccgc
agcacccagagactcatgctgcccccacccgctctcacggccgccggcgtcttcgccaag
ttccgagacatcgccgggctcgccggcagcgcttccacagccaagaagatcgacgtcatc
aaaggcctctttgtcgcctgccgtcactcagaagcccgattcatcgccagagccctgagc
ggacggctacgcctcgggctggcagagcagtcggtgctggccgccctcgcccaggccgtg
agcctcacgccccccggccaagatttccccccggctgttgtggacgctgggaagggccgg
acagtggaggcccggaagacgtggctggaggaacagggcatgatcctgaagcagacgttc
tgcgaggtgcccgacctggaccggatcatccctgtgctgctggagcacggcctggagcac
ctcccggagcactgcaggctgagcccaggggtccccctgaaaccgatgctggcacacccc
acccgcggtgtcagcgagatccttaaacgctttgaggaggcggctttcacctgcgagtac
aaatacgacgggcagagggcacagatccatgtcctggaaggcggggaggtaaagatcttc
agcaggaatcaggaagacaataccggaaagtacccggacatcatcagccgcatccccaag
attaaactgccgtcagtcacatccttcatcctggacacggaagccgtggcttgggaccgg
gaaaagaagcagatccagccgttccaagtgctcaccacccgcaaacgcaaggaggtggac
gcagcagacatccaggtccaggtttgtctgtatgccttcgacctcatctacctcaatgga
gagtccctggtacgcgagcccctttcccggcgccgacagctgctccgggagaacttcgtg
cagacggagggcgagttcgtcttcgccacctctctggacaccaaggacacagaccagatc
gccgagttcttggagcagtccgtgaaagactcctgcgaggggctgatggtaaagaccctg
gacgtcgatgccacctacgagatcgccaagagatcacacaactggctcaagctgaagaag
gactacctcgatggcgtgggcgacaccctggacctcgtggtgatcggcgcctacctgggc
cgtgggaagcgggccggccgctacgggggtttcctgctggcggcctacgacgaggagagt
gaggagctccaggccatatgcaagcttggaactggcttcagtgacgaggagctagaggat
catttccacagcctccaggccctggtgctgcccaccccacgctcctacgtccgggccgac
ggcgccgtggcccccgatcactggctggaccccagcgccgtgtgggaggtgaaatgcgcc
gatctgtccctgtcccccatctaccccgctgcccggggcctggtggatagcgagaagggg
atctccctccgtttcccccggtttattcgcgtccgcgaagacaagaagcccgaggaggct
accaccagtgcccaggtggcctctctgtttaagaagcagagtcagattcagaaccagcag
ggcgcggacttagactccgacccggaagatttctactag

DBGET integrated database retrieval system