Panthera uncia (snow leopard): 125921233
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Entry
125921233 CDS
T08832
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125921233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
puc03019
]
125921233
03012 Translation factors [BR:
puc03012
]
125921233
Enzymes [BR:
puc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125921233
Messenger RNA biogenesis [BR:
puc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125921233
Translation factors [BR:
puc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
125921233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
AAA_14
ATPase
NPHP3_N
DUF6782
ResIII
AAA_23
AAA_34
NACHT
Motif
Other DBs
NCBI-GeneID:
125921233
NCBI-ProteinID:
XP_049484636
LinkDB
All DBs
Position
C2:107729247..107779985
Genome browser
AA seq
1011 aa
AA seq
DB search
MSYDYHHSWGRDGGPRSSGGGHGGSYGGGHGGGHGGNRGSGGGGGGGGGGRGGRGRHPGH
LKGREIGLWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQAKNDKDSEAQISW
FAPEDHGYGTEAPAESKPNSEKKLEDQEKKLINQEKRTFRIRDKYIDRDSEYLLQENEPD
VTLDQQLLEDLQKKKSDPRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKT
TQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQ
SRLPRKQGSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFR
PDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVAEYLLEDIIEKIRYVPEQKEHRSQ
FKRGFMQGHVNRQEKEEKEAIYKERWPDYVRELRKRYSASTVDVLEMIDDDKVDLNLIAA
LIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVF
KRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAK
QRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSR
LMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDP
VLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEDARRRGFRYE
KDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIKAVICA
GLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMRTSSI
YLYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILL
QEKIESPHPVDWKDTKSRDCAVLSAIIDLIKTQEKASPRNFPPRFQDGYYS
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgactaccatcatagctggggccgcgatggcgggccccgcagctctggcggg
ggccacgggggaagctatggagggggccatggagggggccatggagggaaccgaggctct
ggaggcggcggcggcggaggaggaggtggtcgaggcggccgaggccgacatcccgggcac
ctgaaaggccgcgaaattggcttgtggtacgcgaagaaacagggtcagaagaacaaggaa
gcggagaggcaggagagagctgtagtacacatggatgaacgtcgagaagaacaaattgtg
cagctgctgcattcagtccaagctaagaatgataaagattcggaagcacagatatcctgg
tttgctcctgaagatcacggttacgggactgaagctcctgctgagagcaaaccaaactca
gagaaaaaacttgaggaccaggaaaagaaattgataaatcaagaaaagaggacatttaga
atcagggacaaatatattgacagagattctgagtatctcttgcaagaaaatgaacctgat
gtaaccttagaccaacaactattggaagatttacaaaagaaaaaaagtgaccctcggtat
attgaaatgcagcatttcagggaaaagctgccttcatatggaatgcaaaaggaattagtg
aatatgattgataaccatcaagtaacagtaataagtggtgaaactggttgtggaaaaact
actcaagttactcagttcattttggataactacattgaaagaggaaaaggatctgcatgc
aggatagtttgtactcagccaagaagaattagtgccatttcggttgcagagagagtggcc
gcagaaagggccgaatcttgtggcaatggtaatagtaccggataccagattcgtctccag
agtcggttgccaaggaagcagggttctatcttatactgtacaacaggaattatccttcag
tggctgcaatcagactcgcgtctgtccagtgttagtcatattgtgcttgatgaaatccat
gagagaaacctacagtcagatgttttaatgactgttattaaagatcttctcaattttcga
cctgacctgaaagtcatattaatgagtgcgacattgaatgctgagaaattttcagaatat
tttggtaactgtccaatgatacacatacctggttttacttttccggttgcggagtatctt
ttggaagatataattgaaaaaataaggtatgttccagaacaaaaagaacacaggtcccag
tttaagaggggtttcatgcaagggcatgtaaacagacaagaaaaagaagaaaaagaagca
atctataaagaacgctggccagattatgtaagggaactgcgaaaaaggtattctgcaagt
actgtagatgttctggaaatgatcgatgatgataaagttgatctgaatttgattgctgcc
cttatccgacacattgttttggaagaagaggatggtgcaatactggtcttcctaccaggc
tgggacaatatcagcactttacatgatctcttgatgtcacaagtgatgtttaaatcagac
aggtttattattatacccttacattcactgatgcctacggttaaccagacacaggtattt
aaaagaactcctcctggtgttcggaaaatagtaattgctaccaatattgcagagactagc
attaccatagatgatgtagtttatgtaatagatggaggaaaaataaaagagacacacttt
gacacacaaaacaacatcagtaccatgtctgctgagtgggttagtaaagctaatgccaaa
caaaggaaaggtcgagctggaagagtgcagcctggtcattgctatcatctatataatggt
cttagagcaagccttctggatgactatcaactgccagaaattttgagaactcctctagaa
gagctttgtttacaaataaagattttaaggctaggtggaattgcttattttctgagtagg
ttaatggatccaccatcagatgaagcagtgtcactctccataaaacacctgatggaactg
aatgctttggataaacaagaagaattgacaccccttggagtccacttagcacgattacca
gttgagccacacattggaaaaatgattctttttggagctcttttctgttgtttagaccca
gtactcaccattgctgctagtctcagcttcaaagatccttttgtcattccattgggcaaa
gaaaagattgcagatgcaagaagaaaagaattggcaaaagataccaaaagtgaccatttg
acagttgtgaatgcatttgagggctgggaagatgctaggcgacgtggtttcagatatgaa
aaagactattgctgggaatattttttgtcttcaaacacattgcagatgctgcataacatg
aaaggacagtttgctgagcatcttcttggagctggatttgtaagcagtagaaatcctaaa
gatccaaaatctaatataaattcagataatgagaagataattaaagctgtcatctgtgct
ggtttatatcctaaagttgctaaaatccgactaaatttgggtaaaaaaagaaaaatggtc
aaagtttacacaaaaactgatggactagttgctattcatcctaaatctgttaatgtggag
caaacagaatttcactacaactggcttatctatcacctgaagatgagaacaagtagtata
tacttgtatgactgcacagaggtttccccatactgtctcttgttctttggaggtgatatt
tccatccagaaggataatgatcaggaaactattgccgtagatgaatggattgtctttcag
tctccagcaagaattgcccatcttgttaaggaattaagaaaagaactagatatccttctg
caagagaagatcgaaagtccccatccggtagattggaaggacactaaatccagagactgt
gcagtactgtcagctattatagacttgattaaaacacaggaaaaagcaagtcccaggaac
tttccaccacgattccaggatggatattacagctga
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