Panthera uncia (snow leopard): 125921265
Help
Entry
125921265 CDS
T08832
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc04360
Axon guidance
puc04724
Glutamatergic synapse
puc04726
Serotonergic synapse
puc04929
GnRH secretion
puc04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
125921265
09154 Digestive system
04972 Pancreatic secretion
125921265
09156 Nervous system
04724 Glutamatergic synapse
125921265
04726 Serotonergic synapse
125921265
09158 Development and regeneration
04360 Axon guidance
125921265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
puc04040
]
125921265
Ion channels [BR:
puc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125921265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
125921265
NCBI-ProteinID:
XP_049484666
LinkDB
All DBs
Position
C2:complement(118244933..118309102)
Genome browser
AA seq
752 aa
AA seq
DB search
MKKRIHPPALGDYREACDYYMVKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQ
LLLDYGCQSADALLVAIDSEVVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVA
PVILAAHRNNYEILTMLLKQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLA
SPALIMLTEEDPILRAFELSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRE
LEVILNHTSSDEPLDKRGLLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSG
YRRKPTCKKIMTVLTVGIFWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLL
NLYSLVYNEDKKNTMGPALERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFV
MNSLYLATFALKVVAHNKFHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSS
ILGPLQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKGYTPKEQKDCVGIFCEQQSN
DTFHSFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLL
VAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKW
ICSHTSKGKVKRQNSLKEWRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENL
NELRQDLSKFRNEIRDLLGFRTSKYAMFYPRN
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaagaatccatccaccagcactgggagactacagagaagcttgtgactattat
atggttaaaaagattttggaggaaaacagttcaggtgacttgaacataaattgcgtagat
gtgcttgggagaaatgctgttaccataactattgaaaacgaaaacttggatatactacag
cttcttttggactacggttgtcagtccgcagatgcacttttggtggcaatcgactctgaa
gtagtgggagctgttgatatactacttaatcatcgaccaaaacgatcatcaagaccaact
atagtaaaactaatggagcgaattcagaatcctgagtattcaacaactatggatgttgca
cctgtcattttagctgctcatcgtaacaactatgaaattcttacaatgctgttaaaacag
gatgtatctctacccaagccccatgcagttggctgtgaatgcacattgtgctctgcaaaa
aacaaaaaggacagcctccgacattccaggtttcgtcttgatatatatcgctgtttggcc
agtccagctctaataatgttaacagaggaggatccaattctgagagcatttgaacttagt
gctgatttaaaagaattaagccttgtggaggtggaattcaggaatgattatgaggaatta
gcccggcaatgtaaaatgtttgctaaagatttgcttgcacaagcccggaattcacgagaa
ttggaagttatcctaaaccatacatctagtgatgaacctcttgacaaacggggattacta
gaagaaagaatgaatttaagtcgtctaaaacttgctatcaaatataaccaaaaggagttt
gtctcccagtctaactgccagcagttcctgaacactgtttggtttggacagatgtcaggc
taccgacgtaagcccacctgtaagaagataatgactgttttgacagttggtatcttttgg
ccagttttgtcactttgttatttgatagctcccaaatctcagtttggcagaatcattcac
actccttttatgaaatttattattcatggagcatcgtatttcacattcctgttgttacta
aacctatattctcttgtctacaatgaggataagaaaaacacaatggggccagccctcgaa
agaatagactatcttcttatactgtggattattgggatgatttggtcagacattaaaaga
ctctggtatgaagggttggaagactttttagaagaatcccgtaatcaactcagttttgtc
atgaattcactttatttggcaacttttgccctcaaagtggttgctcacaacaagtttcat
gattttgctgatcggaaggactgggatgcattccatcctactctggtggcagaagggctt
tttgcatttgcaaatgttctaagttatcttcgtctcttttttatgtatacaacaagctcc
atattgggtccattacagatttcaatgggacagatgttacaagattttggaaaatttctt
gggatgttccttcttgttttgttttctttcacaattggactgacacaactgtatgataaa
ggctataccccaaaagaacagaaggactgtgtgggcatcttctgtgaacagcaaagtaat
gataccttccattcgttcattggcacttgctttgctttgttctggtatattttctcctta
gcacatgtggcaatctttgtcacaagatttagttatggagaagaattgcagtcctttgtt
ggagctgttattgttgggacatacaatgtcgtggttgtgatcgtgcttaccaagctgctg
gtggcaatgcttcataaaagctttcagttgatagcaaatcatgaagacaaggaatggaag
tttgctcgagcaaagttgtggcttagctactttgatgacaaatgtacgttacccccacct
ttcaatatcattccttcaccaaagactatttgctatatgattagtagcctcagtaagtgg
atttgctctcatacatcaaaaggcaaggttaaacggcaaaacagtttaaaggaatggaga
aatttgaaacaaaagagagatgaaaactaccaaaaagtgatgtgctgcctagtgcatcgt
tacttgacatccatgagacagaagatgcaaagtacagatcaggcaaccgtggaaaatcta
aatgaactacgccaagatctttcaaaattccgaaatgaaataagggatttacttggcttt
cggacttctaaatatgctatgttttacccaagaaattaa
DBGET
integrated database retrieval system
