Panthera uncia (snow leopard): 125921320
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Entry
125921320 CDS
T08832
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125921320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
puc03032
]
125921320
03400 DNA repair and recombination proteins [BR:
puc03400
]
125921320
DNA replication proteins [BR:
puc03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
125921320
DNA repair and recombination proteins [BR:
puc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
125921320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
DUF5568
Motif
Other DBs
NCBI-GeneID:
125921320
NCBI-ProteinID:
XP_049484762
LinkDB
All DBs
Position
C2:126253897..126315464
Genome browser
AA seq
1514 aa
AA seq
DB search
MSRNDKEPFLVKFLKSSDNTECFFKALESIKEFQSEEYLQIITEEEALNMKENDRSLYIC
DPFSGNVFDHLKKLGCRIVGPQVVIFCVHHQRCVPRAEHPVFNMVMSDVTVSCTSLEKDK
REEVHKYVQMMGGRVYRDLNISVTHLIAGEVGSKKYLVAANLKKPILLPSWIETLWEKSQ
EKKIARYTDINMEDFKCPIFLGCTICVTGLCGSERKAIQQLTVKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKKWNVHCVTTQWFFDSVDKGFCQDESIYKTEPRPETKTVPDTSTPT
GQINTVDSRTLSDVSHISNINASCINESIYNSVLNSKVEPTLENLENLDVSAFQAPEDLL
DGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWDKSAHRP
HVVGAKWLLECFSKGYILPEEPYIHANYQPVEIPVSDKPESQTAPLKKNNSSSKKDSTPD
GKHEQADEDLLSQYVNNNTTAVEAAKSEVEPFNDSTHISLQEENQSSVTHCHPDTSTITE
EGLFSQKSFLVVGFSSENESNIANVIRENAGKIVSLQSRIVADYAVVPLLGCEVEATVGE
VVTNTWLVTCIDYQTLIDPKSNPLFVPVSVMAGMTPLEDCVISFSQCAGAEKDSLIFLAK
RLGASVQEYFVRKSNAKKGMFASTHLVLKEPGGSKYEAAKKWNLPAVNISWLLETARTGK
RASESHFLIDKSTKEEQGLETEITNRVNVSPDTAEHPVTHLDTHRKTAVTPLDMNSFQSK
AFHAVISQHTKQVSVSPPVGQPLQKEPSLHLDTPSKFLSKDKLFKPSFDVKDALAALETP
GGPSQQKRKLSTPLSEVIVRNLKLALANSSRNAVALSASPQLKDAQSKKEQEEAPKPLHK
VVVCVSKKLSKKQSELNGIAASLGADYRWSFDETVTHFIYQGRPNDTNREYKSVKEKGVH
IVSEHWLLECAQEYKHLPESLYPHTYNPKMSLDISTVQDGRLCNSRLLAADSATKDDEPD
HLPVEENDIDNMTTSNKELVTSNGDGRNDSKGALTQTLEMRENFQKQLQEIMSATSIVKP
QGQRASLSRSGCNSTSSTPDSSRSARSGRSRVLEALRQSRQTVPDVNTEPSQNEQIIWDD
PTAREERARLASNLQWPSCPTQYSELQVDIKKLEDSPFQEPLHDAETAEQAVCDSGNMCV
TEAPKHPISEELETPIKDSHLIPTPQAPSIAFPLANPPVAPHPREKTITIEETHEDLKKQ
YIFQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPSCTHIIVGHPLRNEKYLASLAAGKW
VLHRSYLEASRTAGHFVPEEDYEWGSSSILDVLTGITVQQRRLALAAMRWRKKIQQRQES
GIVEGAFSGWKVILHLDQSREAGFKRLLQSGGAKVLPGHSVPLFKEATHLFSDFSKLKQD
DSGVNIAEAAAQNVYCLKTEYIADYLTQESPPQVENYCLSETISFLQNKEPGPGSSQKRK
APTEKKKLKRPRVN
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatgacaaagaaccgtttcttgtgaagtttttaaagtcttcagacaatacc
gaatgtttttttaaagctcttgagtcaataaaagagttccaatcagaagaatatcttcag
attattacagaagaagaggcattaaacatgaaggagaatgataggtcactttatatctgt
gacccatttagtggcaatgtctttgatcacctcaaaaagcttggctgcagaattgttggc
cctcaagtagtcatattttgtgtgcaccaccagcgatgtgtcccaagagccgaacatcca
gtttttaatatggttatgtctgatgtaactgtatcttgtacaagcctggaaaaagacaaa
agggaagaagttcataaatatgtacaaatgatgggtggacgcgtatacagagatcttaat
atatcagtaactcaccttattgcaggagaagttggcagcaaaaaatatttagttgctgca
aacctaaagaaacctattttgcttccttcttggattgaaacactttgggagaagtcacaa
gagaaaaaaatagccagatatactgatataaacatggaagacttcaagtgtcctattttt
cttggttgcacaatctgtgtgactggcttgtgtggctcagaaagaaaggcaattcagcaa
ctcacagttaagcatggaggtcaatacatgggacaactgaaaatgaatgaatgtacacac
ctcattgtgcaagaaccgaaaggtcaaaaatatgaatgtgccaagaaatggaatgtacac
tgtgtgaccacacagtggttttttgacagtgttgacaaaggtttttgtcaggatgaatcc
atatacaagacagagcctcgaccggaaacaaagactgtacctgatacttcaactcctact
ggccagatcaacacagttgatagtcgtactctttcggatgtcagccatatttccaacatc
aatgcaagttgcataaatgaatcgatatataattcagttcttaatagcaaagtggagcct
acacttgaaaatctagaaaatctggatgtcagtgcatttcaagcacctgaagatttacta
gatggttgtcggatatatctttgcggttttagtggcagaaagctagataaactgagaaga
cttattaacagtggaggtggagttcgttttaatcagctcaatgaagatgtaactcatgtt
attgtgggagattatgatgatgaattgaagcagttttgggataaatcggctcacaggcct
catgtagtgggagcaaaatggttgctagagtgttttagtaaaggttatatacttcctgaa
gagccatatatccatgctaactaccaaccagtggaaattccagtttcggataaacctgaa
agtcaaacagcccctttaaaaaagaacaacagctcctccaagaaggactctactcctgat
ggaaaacatgagcaagctgatgaagatctcctctctcagtatgtaaataataacacaaca
gcggttgaagctgccaagtctgaagttgagccctttaatgactctactcatatttccctg
caagaagaaaaccagtcttctgtcactcattgccatcctgacacttctacaattactgag
gaaggtttatttagccaaaagagtttccttgttgtgggttttagtagtgaaaatgaatct
aatattgcaaacgtcataagagaaaatgctggaaaaattgtctcccttcagagcagaatt
gttgctgattatgctgtggttcctctgctggggtgtgaagtagaagcaactgtaggagaa
gtcgttacaaatacgtggctggtaacttgcatagactatcagactttaattgatccgaag
tcaaatcctctctttgtgccagtctcagtaatggcaggaatgactcctttagaggattgt
gttatttcattcagccagtgtgcaggagcagaaaaagattcgttgatattcttagcaaaa
cgccttggagcaagcgttcaagaatactttgttcgcaaatccaatgcaaagaaaggcatg
tttgccagtacacatcttgtattgaaggaaccaggtggttctaaatacgaagctgccaag
aagtggaatttaccggcagtcaacatatcatggctattggagactgctagaacgggaaag
agagcaagtgaaagccattttctgattgataagtcaactaaagaagaacaaggtttggaa
actgaaataacaaacagggtgaacgtaagcccagatactgcagagcatcctgtcacacac
ctggacactcacaggaaaacagctgttacacctttagatatgaacagctttcagagtaaa
gctttccatgccgtgatctcccaacacaccaaacaagtgtctgtgtccccaccagtagga
cagccacttcagaaggagccctccttgcatctggatacaccatcaaaatttctgtccaaa
gacaaactcttcaagccttcctttgatgtgaaggatgcacttgcagccttggaaactcca
ggaggtcccagccaacagaaaaggaaactgagtacaccactttcagaagtcattgtcaga
aacttgaaacttgctttggcaaacagctcccgaaatgctgttgctctttctgccagccct
cagctgaaggatgcccaatccaagaaggaacaggaagaagctccaaagccacttcacaag
gtagtggtatgtgttagtaagaaactcagtaagaagcagagtgagctgaatgggattgca
gcctctctaggagcagattacagatggagttttgatgaaacagtgactcatttcatttat
caaggccgaccaaatgacactaaccgagaatataaatctgtaaaagaaaaaggagtacac
attgtttcagagcactggcttttagaatgtgcccaagagtataagcatcttcctgaatct
ctttatccacatacttataatcccaaaatgagcttggatatcagtacagtgcaagatggc
agactctgtaatagtcgactactcgcagctgattcagcaacaaaggatgatgagccagat
catttgcctgtagaagaaaatgacatagacaatatgaccaccagtaataaagaattagta
acatcaaatggagatggaaggaatgactctaaaggagctctgacacagacattggagatg
agagagaactttcagaagcaactgcaggagatcatgtctgcgacgtcaatagtgaaaccc
caagggcagagggcttccctttcaagaagtggttgtaacagcacttcttcaacccctgat
agcagtcgctctgcccgcagtgggcgaagtagagtcctggaggcactgaggcagtctcgt
caaacagtacctgatgtcaacacggagccctcccagaatgaacagatcatttgggatgac
ccaacagccagggaggagagagcacggcttgccagcaatctgcagtggcctagttgtccc
acacagtattctgagcttcaggttgacattaaaaaattggaggattctcctttccaggag
cctttacatgacgcagaaactgctgaacaggctgtctgtgattccggaaacatgtgtgta
actgaagccccaaaacacccaatctctgaggaactggaaacaccaattaaagacagccac
ctgatccctacacctcaagcccccagtattgccttccccctggccaacccaccagtggct
ccacaccctagagaaaagactataacaatagaggaaactcatgaagacttaaaaaaacag
tacatatttcagttgtcatctctgaatcctcaagaacgtattgattattgtcatctgatt
gaaaaactaggtggactagtaatagagaagcagtgctttgatcccagttgtacacacatt
attgtgggacatccacttcgaaacgagaagtatttagcttcattggcagctgggaagtgg
gtgcttcatcgctcctacctggaagcatcccggactgctgggcacttcgtgccggaagaa
gactacgaatggggaagtagttccatacttgacgttttgactggaatcactgtacagcaa
cgaagactagcacttgcagcaatgagatggagaaaaaaaatccagcaaagacaagaatcg
ggcattgttgagggggcatttagtgggtggaaggtcatcttacatcttgaccagtcccga
gaagcaggattcaaacgccttcttcagtcaggaggagcgaaggtgctacctggtcattct
gtacctttatttaaagaggccacacatctcttctctgacttcagtaaactgaaacaagat
gactcaggagttaacatagcagaggctgctgcccagaatgtgtactgcctgaaaacagag
tacattgctgattatctgacgcaggaatcccctcctcaagtagaaaactactgtctatca
gaaactatttcatttcttcagaataaggaacctgggcctggatcatcacagaagaggaaa
gctcctacagagaaaaagaaactcaaacgacctagagtaaactaa
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integrated database retrieval system
