Panthera uncia (snow leopard): 125921457
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Entry
125921457 CDS
T08832
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125921457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
puc03019
]
125921457
Messenger RNA biogenesis [BR:
puc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125921457
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
ARM_TT21_N
TPR_14
TPR_19
TPR_12
ARM_TT21
TPR_8
TPR_MalT
TPR_7
DUF6058
Motif
Other DBs
NCBI-GeneID:
125921457
NCBI-ProteinID:
XP_049485013
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Position
C2:153121686..153193816
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AA seq
843 aa
AA seq
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MYLCVQLTDFSVLKKQCVSFRLSSDLKAIVWFKMKPVGLKGVRVCVPKSPVRLEAQPCSL
GQSRRKVRFKDEGPFSLTIGNGDYFWTNKDILWNYVQTLSDQGAEKHEGTSQSSGITDQE
KELSTSAFQAFTAGNYDACLQHLACLQEVNKDDYKIILNTAVAEFFKSNQMTTDSLRQTL
NQLKNQVHSAVEEMDGLDDVENSMLYYNQAVFLYHLRQYSEAIAVGEKLYQFIEPFEEKF
AQAVCFLLVDLYILTYQAEKALHLLAVLEKMISQGNNNKNGKNETGSNSSKDGSDHKAES
GALIEAARSRAHQYKVRAYIQMKSLKACKREIKSVMNTAGNSAPSLFLKSNFEYLRGNYR
KAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLGCIHFAMSKHNLGIFYFKKALQENDNVC
AQLSAGSADPGKKFSGRPMCTLLTNKRYELLYNCGIQLLHIGRPLAAFECLIEAVQVYHA
NPRLWLRLAECCIAANKGTAEQETKGLPSKKGIVQSIVGQGYHRKIVLASQSIQNTVYND
GQSSAIPVASMEFAAICLRNALLLLPEEQQDPKQENGSKNSNQLGGNAESSESGETCSSK
SHDGDKFIPAPPSSPLRKQELENLNPSLLCSRCSILACSAYVALALGDNLMALNHADKLL
QQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVTDVSLGISSNEQDQGSDKGEN
EAMESSGKRAPQCYPSSVTSARTVMLFNLGSAYCLRSEYDKARKCLHQAASMIHPKEVPP
EAILLAVYLELQNGNTQLALQIIKRNQLLPAVKTLSEMRKKPVFQPVHPVQPIQMPAFTA
HRK
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgtgcgttcagttaactgacttttcagttttgaaaaagcagtgtgtttctttt
cgacttagttcagacctaaaggcaattgtttggttcaaaatgaagcctgttggcttaaag
ggtgtccgggtttgtgtgcctaagagccctgtacgcctagaagctcagccatgttcatta
ggccagagtagaaggaaagtcaggtttaaggatgaagggccattttctcttacaatcggc
aacggagactacttttggacaaataaagacatattgtggaattatgtgcagactctttct
gatcagggagcagagaaacatgaagggacaagtcagtcctctgggatcaccgatcaagag
aaggagttgtccaccagtgctttccaggctttcacagctggaaattatgatgcctgtctg
caacaccttgcctgcctacaagaagtgaacaaagatgattataaaataattttgaacaca
gcagtggctgagttttttaaaagtaaccaaatgacaacagacagtttgagacagacactt
aaccaactgaagaatcaggtccactcagctgtcgaagaaatggatggcttagacgacgtg
gagaacagcatgttgtattacaatcaggcagtctttctgtatcatctgcggcagtactca
gaggccatagcagttggtgaaaagctctaccagttcatagaaccttttgaagaaaaattt
gcccaagcagtgtgttttttgcttgtagacctatatatattaacctatcaagctgagaaa
gctttgcatcttcttgcggtcctagaaaaaatgatttcacagggtaacaataacaaaaat
gggaagaatgagactggtagcaacagcagcaaagacggatctgatcacaaagctgaaagc
ggagccctgatagaagctgcaagatccagggcccatcagtataaagtgagagcttatatc
caaatgaagtccctgaaagcatgcaaaagggaaatcaagtcggtcatgaacacagccgga
aattctgccccctctctgtttcttaagagcaattttgagtacttaagaggcaattatcga
aaagctgtgaagctgttaaatagttcaaacattgctgagcatccaggattcatgaaaaca
ggtgaatgcttgagatgcatgttctggaataatcttggttgtatccattttgccatgagc
aagcacaatttgggaattttctactttaaaaaggccctccaggagaacgacaatgtttgt
gcacagctcagtgcaggcagcgctgatccaggcaaaaagttttcaggaagacccatgtgt
acgttactaaccaacaagaggtacgagttgctgtataactgtggaattcagcttcttcac
atcggaagacctcttgccgcctttgagtgtctgattgaagctgttcaggtttatcacgca
aatccccgcctctggctacggctggccgaatgctgcattgctgcaaacaaggggactgct
gaacaagaaactaaaggccttccaagtaagaaaggaattgtacagtctattgttggtcaa
ggctatcatcgtaaaatagttctggcatcgcagtccatacagaatactgtatataacgat
ggacagtcttcagccattcctgtagccagcatggagtttgcagccatctgtctccgaaat
gccttgctgctcttaccggaagaacagcaagatccgaagcaggaaaatgggtctaaaaat
agtaaccaattaggtgggaacgcggagagcagcgaaagcggcgaaacttgcagcagtaaa
agccatgatggagataagttcattccagctccaccttcctctccactgagaaaacaggaa
ttagaaaacttaaacccttcccttttgtgttccagatgctccatacttgcctgcagtgct
tacgtggctctggcgttaggtgataaccttatggctttgaatcacgcagataaacttctt
cagcagcccaagctgtcaggatcccttaagtttttgggccatttatatgctgcagaagcc
ctcatctctctggacaggatatctgatgccattactcacttgaaccccgagaatgtcact
gatgtttccttgggcatctcttcaaatgaacaggaccaaggatcggacaaaggtgaaaat
gaagcaatggaatcctctgggaagcgggccccccagtgctaccccagttccgtcacctct
gccaggaccgtgatgcttttcaatctcggcagcgcctactgtctgcggagcgaatacgac
aaggctcgaaagtgtctgcaccaggcggcttcaatgatccaccctaaggaggtgccccct
gaggccatcttactggcggtctacctcgagctgcagaatggtaacacccagctggcctta
cagatcatcaaaaggaatcagctgcttcctgcggtgaaaacactgtctgagatgagaaag
aagccagtgttccagcctgtccacccggtccagcccatccaaatgccggctttcactgca
cacagaaagtga
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