Panthera uncia (snow leopard): 125923231
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Entry
125923231 CDS
T08832
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc00100
Steroid biosynthesis
puc01100
Metabolic pathways
Module
puc_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
125923231
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
puc01006
]
125923231
Enzymes [BR:
puc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
125923231
Prenyltransferases [BR:
puc01006
]
Terpene biosynthesis
Squalene/phytoene synthase
125923231
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
Octopine_DH
Motif
Other DBs
NCBI-GeneID:
125923231
NCBI-ProteinID:
XP_049487321
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Position
B1:complement(149121289..149162176)
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AA seq
485 aa
AA seq
DB search
MEEKFYASPAISMAAAACGTKAMSLFKRTLVLSPAAAPRGTGAGSPPRGCPLPPAAWPSK
DWPRGEGVCGRLRSPPVAGRLPHSHSCSAASPTAVCLLCPQDSLSSSLKTCYKYLNQTSR
SFAAVIEALDGEMRHAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSYLYEPDWRYM
ESKEKDRQVLEDFPTISLEFRNLAEKYQTVIVDICRKMGFGMAEFLDKHVTSEQEWDKYC
HYVAGLVGIGLSRLFSASELEDPLVGEDVERANSMGLFLQKTNIIRDYLEDQREGREFWP
QEVWSKYVKKLGDFAKPQNIDSAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIP
QVMAIATLAACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPSS
DPSSSKTRQIISTIRTQNLPNCQLISRSHYSPIYLSFVMLLAALSWQYLSTLSQVTEDYV
QTGEH
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaattctacgccagccctgcgatttccatggccgcagccgcctgcggcacc
aaggccatgtccctgttcaagcggaccttggtgctgagccccgccgccgcgccccggggt
acgggcgcgggctccccgccacgcggctgccccttgcctcccgccgcctggccctccaag
gactggccgcgcggagagggcgtctgcggcaggctgcggagcccgccggtggccggccgc
ctgccccattcccactcctgctccgccgcgtctcccaccgccgtgtgtcttctctgcccg
caggattcgctcagcagcagcttgaaaacttgctacaagtatctcaatcagactagtcgc
agtttcgcagctgtcatcgaggcgctggatggggaaatgcgccatgcggtatgcatattt
tacctggtcctccgggctctggacactctggaagatgacatgaccatcagtgtagaaaaa
aaggtcccactgttgcacaacttccactcttacctttatgaaccagactggcggtatatg
gagagcaaggagaaggatcgacaagtgctagaggacttcccaacgatctccctcgagttt
agaaatctggctgagaaatatcaaacggtgattgttgacatttgccggaaaatgggattt
gggatggcggagtttttggataaacacgtgacatccgaacaggagtgggacaagtactgt
cactatgtcgccgggctggtgggaattggcctttcccgtctgttctcagcctcagagtta
gaggaccccctagttggtgaagatgtagaacgtgccaattctatgggcctgtttctgcag
aaaacaaacatcattcgtgattatctggaagaccaacgagaaggaagagagttttggcct
caagaggtttggagcaagtatgttaagaagttgggtgattttgctaagccacagaatatt
gactcagctgtgcagtgcctgaacgaacttataaccaacgcactacaccacatcccagat
gtcatcacttacctttcaagacttagaaaccaaagtgtgtttaacttctgtgctattcca
caggtaatggccattgccactttggctgcctgttacaataaccagcaggtgttcaaaggc
gtagtgaagatccgaaaaggacaagcagtaactctaatgatggatgccaccaatatgcca
gctgtcaaagctataatataccagtatatggaagagatttatcatagaatccccagctca
gacccatcttctagtaaaacaagacagatcatctccaccatcaggacacagaatcttcct
aattgtcagctgatctcccgaagtcactactcccctatttacctgtcatttgtcatgctc
ttggctgccctgagctggcagtatctgagcaccctgtcccaggtcacagaagactatgtt
cagactggagagcactga
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