Panthera uncia (snow leopard): 125925046
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Entry
125925046 CDS
T08832
Name
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
puc
Panthera uncia (snow leopard)
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
puc04131
]
125925046
Membrane trafficking [BR:
puc04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
125925046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
125925046
NCBI-ProteinID:
XP_049489719
LinkDB
All DBs
Position
D4:18135990..18393652
Genome browser
AA seq
3172 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLTLGIWGGAVALKNLEIKENALSQLDVPFKVKVG
HIGNLNLTIPWKNLYTQPVEAVLEDIYLLIVPSSQIKYDPVKEEKQLLEAKQYELKRIEE
AKQKVADQEKRQVEKPDTFTEKLITQIIKNLQVKISNIHIRYEDDITNRDNPLSFGISLQ
NLSMQTTDQFWIPCLHDETEKLFRKLIRLDNLFAYWNVKSQLFYLNDYDESLDSLRNGIV
NKNIVPEGYDFVFRPISANAKLQMNRRSDFDFSAPKINLEVELHEIAIEFNKPQYFSIME
LLESVDMMTQNLPYRKFKPDVPLHYHAREWWTYAIHGILEVNVCPRLRMWSWKYIREHRQ
KMKQYKELYKKKITTKKPTGELLLSLQELEKILDVFNITISRQQAEVEVKKAGYRIYREG
AKDSEDNKGWFSWLWTWSEPRSKEQPDVKPGILEEMLTPEEKVLLYEAIGYSETAVDPTL
PKTFEAMKFFVHLKSMSIVLREKRETPELLDIVVEEFSTLIVQRPGAQAIKFETKIDSFH
VTGLPDNSTKPHLLSSLDDATSLFQIIFEINPLDETAAQRCIIEAEPLEMIYDARTVNSI
VEFFRPPKEVNLAQLTSATLIKLEEFRDKTATGLLYIIETQKVLDLKIDLKASYVIIPQD
GIFSPTSNLLILDLGHLKVTSKSRLELPDMKQGGARLEEIMHRAYDSFDVQLTSIQLLYS
TVGDNWKEARKLNVSTQHILIPMHFNVELAKAMVFMDIRMPKFKIFGKLPLISLRISDKK
LQGILELIESIPKPTPATETYAPAKPFQIQRSTSLGTSQISQKVLPLLELPCVEDDSEEE
FFDALCSPLEEPPQSPTGVKSGQQKKFQKPDYTKNMIQYKIRFEVPEVLIQFYHLVGDCE
LPVVEIDVLGLGTDVELRTFDLKANAFLKEFCLKCPEYFDENKKPVYLITTLDNTMEDLL
TLEYVKAEKNLPNLKSTYNNVVQLIKVNFSSLDIHLHTEALLNTINYFNNVLPQLEEKRA
SVSVAETEDKGEVIKKMSLKLPKNEDIITLQILAELSCLQIFIQDQKRNISEIKIEGLDS
EIIMRTSATEINAKLRNIIVLDSDKTALYKKAVYITGKEVFSFKMVSFVDATAGSAYTDM
NVVDVQVTLTVGCIEVVFITKFLRSILAFIDNFQAAKQALAEATVQAAGMAATGVKELAQ
RSSRMSLDVNIKAPVVVIPQSPVSENVFVADFGLITMTNTFHIITESQSNPPPIIDLITI
RLSEMRLYRSQFIDDAYQEVLDLLLPLNLEVIVERNLSWEWYQEVPCFNVNAQLKPMEFI
LSQEDLTTIFKTLHGNVWYEEGHGASPAGVKDEHGITSGATNASHLSEGTTVVTAAVVEI
HSQASQVKTTLNMSFKTDYLTMVLYSPSPEQTSFTDVRDPALKLAEFKLENIISTAKMYT
DDSVFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDVKYRKVRDGLVTDLVFQ
EMYICASVEFLLTVANVFLEAFTTGTAIETSVQTWTAKEEVPVQEKEKWEVNIIIKNPEI
VFVADMTRSDAPALVITTQCEICWKGDRENSTMTAAIKDLQVRACPFLPVKRKGRITTVL
QPCDLFYQATQISANPQVIDISVKSLTLKVSPVIINTVITITSALYTSKETIPEDTASST
AHLWEKKDTKSLKMWFLEEPNEVENKAPTTELILRGEIIRVNIDSIFIVLEAGVGHRTVP
MLLAKSRFSGEGKNWSSLINLYCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNLG
IKMKKKAKKTIVESDTEEENYKVPEYKTVLSFHSKDQLNITLSKCGLVMLNNLAKAFTEA
ATGASAVIIRDLAPFMILNSLGLPVSVSPSDSFSVLNVPLARSYVLKNEESLSMDYVGTK
DNDHFNAMTSLSSKLFFILLTPTNHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQVDG
VEGSKKVTIRSPVQIKNHFSIPLSVYEGDTSLGTASPGSEFNIPLTSYRSPLSLKPEDED
YEVCERIDFEEIIKNEGTLLKKICTSTNAAKKPFIINVVPEKDNLASLSVYSEDGWDLPY
IMHLWPPILLRNLLPYKIAYYIEGIEHRVYTLNEGQSAHICTAQLDKARLHLKLLDYLNH
DWKSEYCIKPNQQDISFINFTCVTEIEKTDLDIAIHVTYNIGQTVVAFHSPYWMVNKTGR
MLQYKADGIHRKHPPNYKKPILFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAV
KCKGLKMEYQVGVTIDLSSFNITRIVTFTPFYMIENKSKYHISVAEEGNDKWLSLDLEQC
IPFWPEDASNALLVQVERNQGPPKKIHFNKQENCILLRLDDELGGVIAEVNLAEHSTVIR
FSDYHDGAATFLLINHTKSDIVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRKLKWRCG
KSHGEVTQKDDMMTPINLGKKTIYLVSFFEGLQRIILFTEDPRVFKATYESEKAELAEQE
IVLALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSIKHTEKLEKEFKE
YTESSPSEDKVIELDTNIPVRFTPSGTNMKILQPHVIAIRRNYLPALKVEYSTSAHQSSF
RIQIYRIQIQNQIHGAIFPFVFYPIKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKY
FKVLIQEMDLRLDLGFVYALAELMTEAEVTEKTEVELFHKDIEAFQEEYKTASLVDSSQV
SLYEYFHISPIKLHLSVSLRSGREEAKDSEKQEGLMAVHSLNLLLKSIGATLTDVQDVVF
KLAFFELNYQFHTASELQSEVVRHYSKQAIKQMYVLILGLEVLGNPFGLIREFSEGVEAF
FYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITNAMAKGVAAMTMDEDYQQ
KRREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLV
GAVARPTGGIIDMASSTFQGIKRATESSDEVESLRPPRFFNEDGVIRPYRLRDGTGNQML
QVMENGRFAKYKYFTHVMINKTDMLMITKSGVLFVTKGTFGQLTCEWQYSFDEFTKEPFI
VHGRRLRIEAKERVKSVFHAKEFGKIINFKTPEDARWILTKLEEAREPSPRF
NT seq
9519 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggatgtgttgaaccggttcttgggggactatgtggtg
aacctggacacgtcccagctcactctgggcatctggggaggagctgtggccttgaagaat
cttgaaattaaagaaaatgctctgagtcaactggatgtaccatttaaagttaaagttggt
catataggtaatcttaatcttacaattccgtggaaaaacctgtatactcaaccagttgaa
gctgtcctggaagacatttatttactcatagtgccttcttctcaaataaaatacgatcct
gtaaaagaagaaaaacaactcttggaggcaaagcaatatgaacttaagcgaatagaagaa
gcaaaacaaaaagtagctgatcaagaaaaacgtcaggtggagaaaccggacactttcaca
gaaaaattaattactcagatcataaaaaatcttcaagtgaaaatttccaacatccatatt
cgttacgaagatgatatcacaaatcgagacaatccattgtcatttggtatttcccttcaa
aatctcagcatgcagacaactgatcaattctggattccatgtttacatgatgaaactgag
aaactctttcgtaagttaatccgattggataacctttttgcctattggaatgtgaagtct
cagttgttttaccttaatgattatgatgaatcattggacagcttgaggaatggtattgtc
aataaaaatattgttccagaaggttatgattttgtgtttcgtcccatatctgctaatgcc
aaacttcagatgaatcggcgatcggattttgacttctctgcacccaagataaacctggaa
gttgagttacatgagatagcaattgaatttaataaaccacagtatttcagcattatggag
cttcttgagtcagttgatatgatgacgcaaaatctgccatataggaaattcaaacctgat
gtacctcttcactatcatgccagagaatggtggacttatgctatacatggcattctggaa
gtaaatgtctgcccccggttacggatgtggtcatggaagtatattagagaacacaggcaa
aaaatgaagcagtataaagaactgtataaaaaaaagataacaactaaaaagccaactggt
gaacttctcctctctttgcaggagttggaaaagatcttggatgtatttaatataactata
tcaagacaacaggcagaagttgaggtaaagaaagctgggtacaggatttacagagaagga
gcaaaagattcggaggacaataaaggatggtttagctggctgtggacttggtcagaacca
agaagtaaagaacagccagatgttaagcctggaattcttgaagaaatgttgacacctgaa
gaaaaagttttactctatgaagcaattggctacagtgaaacagcagttgatccaaccttg
cctaaaacatttgaagccatgaagttttttgttcacttgaaaagtatgtctattgttcta
agagaaaaacgagaaacacctgaactgttagatattgtagtggaagaatttagcactttg
atcgtgcaaagaccaggagcacaagcaattaaatttgaaaccaaaattgattcatttcat
gtcactggcttaccagataattcaacaaaacctcacctcctttcttccttggatgatgct
acgtcactcttccaaattatatttgagataaatccgttagatgaaactgctgctcaaagg
tgtatcatagaagctgaacctttagaaatgatatatgatgcaagaacggtgaatagtata
gtggaatttttcagacctccgaaagaggtaaatctagcacagctcacttcagcaactttg
attaaacttgaagaatttcgtgacaagacagcaacaggtctactgtatattattgaaaca
cagaaagttcttgatctcaaaattgatttgaaggcttcatacgttattatcccacaggat
ggaatttttagccctacgtcaaatctacttattttggatcttggtcatctaaaggtgaca
agtaaaagtcgtttggagttaccagatatgaaacaaggtggggccagacttgaagagata
atgcatagagcttatgattcctttgatgttcagcttacaagcatacagctgctttacagc
acagttggtgataattggaaagaagctcgaaaacttaatgtatctacacaacatattttg
atacctatgcacttcaatgtggaacttgctaaggccatggtttttatggatataaggatg
cccaaattcaagatatttggaaagttaccactgatttctttacgaatctcagataaaaaa
ctgcaagggattttggaattgattgaaagcattccgaaacccacacctgcaactgaaaca
tatgcccctgccaaaccatttcagattcaaaggtcgacttctttgggaacatcacagatt
tcacagaaagtgcttcctctcctggaacttccatgtgtcgaagatgattcagaggaagaa
ttttttgatgcactgtgtagtcccttggaagagcctcctcagtctcccactggagttaaa
agtggtcaacagaaaaagtttcaaaagccagattatacaaaaaatatgattcagtataaa
ataagatttgaagtgccagaggttttgattcagttttatcaccttgttggagattgtgaa
ctacccgtggtagaaattgatgttttaggactgggcacagatgttgagcttagaacattt
gatttgaaagcaaatgcctttttgaaagagttctgcttaaaatgcccagaatactttgat
gaaaacaagaaaccagtttatttgattacaacactggataatacgatggaagatctgcta
acactggagtatgtgaaggcagaaaagaacctacctaatttgaaaagtacttataacaat
gttgtgcaactaattaaggtgaatttttcctctttggatattcatttacatactgaagca
cttctgaatacaataaactattttaataacgtactcccacaactagaagaaaaacgagcc
tctgtgtctgttgcggagactgaagacaaaggagaggtcattaaaaaaatgtctttaaaa
ctacccaagaacgaagatattattaccttgcagattttggcagaattatcttgtttacag
atctttattcaagatcagaaacgtaacatttctgaaattaagattgaagggcttgattct
gagataataatgaggacttcagccactgaaataaatgcaaagctaaggaatataattgtc
ttggattctgataaaacagctttatacaaaaaggccgtttacatcactggaaaagaagtt
ttcagcttcaaaatggtttcttttgtggatgcaactgctggttctgcatacacagatatg
aacgtggttgatgttcaagttactttaactgttggttgcattgaagtagtttttatcaca
aaatttctacgttctatattggcttttatagataattttcaagcggctaaacaagctttg
gctgaggctactgttcaggcagcaggaatggcggccactggtgtaaaagaactggcacag
aggagttctagaatgtcattggatgttaacatcaaagccccagtggtggtcatcccacag
tctccagtttctgaaaatgtttttgttgctgattttggactaattacaatgacaaataca
ttccatataataacagagagccagagcaaccccccacccattattgatttgataacaata
aggctgagtgaaatgcgactatacaggtctcaatttattgatgatgcataccaggaagta
ctggatctgctactgccattaaatcttgaggtgattgttgagcgaaatttatcttgggag
tggtaccaggaagttccttgttttaatgtaaatgctcagctaaagcccatggagttcatt
cttagtcaagaagatttaacgactatttttaagacattacatggcaatgtgtggtatgaa
gaaggtcatggcgcctcacctgcaggagtaaaagatgagcatggtattacgagtggagct
actaatgcttcacacctttcagaaggaacaactgtagtgacagctgctgtggtagaaata
cattcacaggcctctcaagttaagacaacgctaaatatgagtttcaaaactgattatctc
accatggtactatatagtccaagtcctgagcagacttcctttacagatgttcgtgatcct
gctctgaaacttgctgaatttaagttggagaatattataagcactgcaaagatgtataca
gatgactcagtattttcttccttctcattaaaaaactgtattttagatgataaaagacct
catgtcaagaaggcaactcctagaatgataggactgacggttgggtttgacaaaaaggac
atgatggatgtaaagtataggaaagtcagagatggtttggtgactgatttagtctttcaa
gaaatgtatatttgtgccagtgtagaatttctgctgacagttgcaaacgtctttcttgag
gccttcaccacgggcacggctatagaaaccagcgttcaaacatggactgctaaggaagaa
gtacctgtacaggaaaaagagaagtgggaagttaatattattattaaaaatcctgaaatt
gtgtttgtggctgatatgacacgaagtgatgctcctgccttagtcattacaacacaatgt
gaaatttgttggaaaggtgaccgtgagaacagtacaatgactgctgccattaaagatctt
caagtgagagcatgcccatttcttccagtcaagagaaaaggcagaatcactacggttttg
cagccctgtgacttattctatcaagctactcaaataagtgcaaatccacaagtgattgat
atatcagtaaaatccttgacactgaaggtttcaccagttatcataaatactgtgattacc
ataacgtcagcactttatacatctaaggaaaccatccccgaggatactgcttcttctaca
gcacatttatgggaaaagaaggatactaagagtttaaaaatgtggtttcttgaagaacca
aatgaagttgaaaacaaagctcccacaactgaattgatactcagaggagagatcataaga
gtgaacattgattctatttttatagttcttgaggctggagttggtcacagaacagtgcct
atgctgttagcaaagtcacgtttttcgggggaaggcaaaaactggagttccttgataaat
ctatactgtcagcttgaattagaagtccattattacaatgaaatgtttggtgtatgggag
cctttgcttgaacctttagaaattgatcagactgaggattttagaccatggaatcttgga
atcaagatgaaaaagaaagcaaaaaagactattgttgagtcagatactgaagaagaaaat
tacaaagtgccagaatataaaactgttctcagtttccattcaaaagaccaactaaacatt
acgttatccaaatgcggccttgtaatgttaaataatttagccaaggcatttacagaagcc
gccactggagcttcagctgtcatcatacgggatctagcaccatttatgattttaaattct
cttggacttccggtctctgtttcaccaagtgattcttttagtgtactcaatgttccattg
gcaagatcctatgtattgaaaaatgaagagagtttaagtatggattatgtaggaactaaa
gacaatgatcatttcaatgcaatgaccagcctaagcagtaaactcttctttattcttctt
acacccactaaccactctactgctgataagattcctttaacaaaagtgggacgacgacta
tacaccgtaagacacagagagtctggggttgaaagatctattgtttgtcaagtcgatgga
gtggaaggaagtaagaaggtaacaattcgttctccagtgcagattaaaaatcatttttca
attccactttctgtttatgaaggggacacttcattgggaacagcttcacctggaagtgaa
ttcaacataccattaacatcttaccgatcacctctttctctgaagccagaagatgaggat
tatgaagtgtgtgaaagaattgactttgaagaaattataaaaaatgaaggcactcttcta
aagaagatatgtacatctacaaacgctgctaagaaaccatttattattaatgttgtccca
gaaaaagataatttggcatctctctctgtgtattcagaagatggttgggacttaccatac
ataatgcatttgtggccgcctatcctcctccgaaatcttcttccttacaaaattgcttat
tatatagaggggattgaacacagagtttatactctaaatgaaggacagtcagcccatatt
tgtactgcgcagttggataaagccagactacatttaaaattacttgactatcttaatcat
gattggaaaagtgaatattgtataaagcctaatcagcaagatattagtttcatcaatttc
acctgtgttacagaaatagaaaagactgatttagatattgctatccatgtaacttacaat
atcggccagacagttgtggcatttcatagtccttattggatggtcaataaaactggtcga
atgttacagtataaagcagatggaattcatcgaaagcatccacctaattacaaaaaaccc
attcttttttcttttcaaccaaagcatttttttaataacaataaggttcagcttatggta
actgatagtgaattgtcagatcagttttcaattgatactgttgggagtcatggagctgtt
aaatgtaaaggcctgaaaatggagtatcaagttggtgtcactatagacctcagcagtttt
aacattaccagaattgtgacttttacccctttttatatgattgaaaacaaaagcaaatac
catatatcagtggctgaagagggaaatgataaatggctctctcttgatttagagcagtgt
attcccttttggcctgaggatgcttctaatgcgctgcttgttcaagttgaaagaaatcaa
ggccctcccaaaaagatacattttaacaagcaagaaaattgtattttattgcgtctggat
gacgagcttggaggtgttatagcagaggttaatttggccgaacattctacagttattcga
ttttcagattatcatgatggagcagctacattcctgttaataaatcacaccaagagtgac
attgttcagtacaaccaaagttctctcagtgaaatagaagattccctccctcctggaaaa
gcagtattttatacatgggctgatccagtgggctctagaaagctgaagtggagatgtgga
aaaagccacggtgaagtaacacaaaaggatgatatgatgacacctataaatttggggaaa
aagaccatttatttagtttcattctttgaaggcttacagcgcattattttattcactgaa
gatccaagggtatttaaagcaacatatgaaagtgagaaagcagagttagcggagcaagaa
attgtgttggccttacaagatgttggaatttccctcgtcaacaattacacaaagcaagaa
gtagcctatattggcattacaagttctgatgtggtttgggagacaaagcccaagaagaag
gcaagatggaagccaatgagtataaagcacactgagaagttagaaaaagaatttaaggaa
tatactgaatcttcaccttcagaagataaggttattgagttggacactaacattccggtt
cgcttcacacctagtggcactaacatgaaaattctgcaaccacatgtaatagctatacga
agaaattatcttccagcattaaaagtagaatatagcacatctgcacatcagtcatcattt
agaattcaaatttacagaatacagatccaaaaccagatacatggtgctatatttcctttt
gtgttttatccgattaaacctcccaagtcggtcactatggattcagctccaaaacccttc
acagatgtcagtattgttatgagatctgcaggccattcccagatttcgcgtattaagtac
ttcaaggtgttgatccaagaaatggatctcaggttagatcttgggtttgtctatgcttta
gcagaacttatgacagaagcagaagtgactgaaaaaacagaggttgaactttttcataaa
gatatagaagctttccaagaagaatataaaacagcttcattagtagattcatcacaagtc
agtctctatgaatactttcatatatctcccatcaagttgcacttaagtgtttcactgcgt
tcaggtagagaagaagctaaagattcagaaaaacaggaaggactgatggcggttcattcc
ttaaatcttctgctgaagagtattggtgcgactcttacagatgtacaagatgtagttttt
aagcttgcattttttgaactcaactatcagttccatacagcatctgaactacaatctgaa
gtagtaagacactattcaaaacaggccattaagcaaatgtacgtactcattcttgggctt
gaagttttgggaaatccctttggcttgattagagaattttctgaaggtgtggaagcattt
ttttatgaaccttaccagggagccatccagggtcctgaagagtttgtggaggggatggcc
ctaggactgaaggcactagttggtggagctgtcggtggattagctggtgctgcctctaaa
atcaccaatgctatggcgaaaggggtggcagctatgactatggatgaagactaccaacag
aagagaagagaagccatgaataagcaaccagcgggtcttagagaaggcatcactcgtgga
ggaaaaggcttggtttctggttttgtaagtggcataacgggaattgttacaaaaccaatc
aaaggagctcaaaaagaaggagcagctggtttcttcaaaggtgttgggaaaggtttagtt
ggagcagtggcaaggccaaccggaggcatcatagacatggctagcagtacatttcaggga
ataaaaagagctacagagagttctgatgaagtggagagcctgcgaccccctcgattcttt
aatgaggatggagttatcagaccttacaggttgagggatgggactggcaaccaaatgtta
caggtcatggaaaatggaagatttgcaaaatacaagtattttacccatgtcatgatcaac
aaaacagatatgttaatgataactaaaagtggtgtcttgtttgtaacaaaaggaacattt
ggacagcttacatgtgagtggcagtatagttttgatgagtttaccaaagagcccttcatt
gttcatgggagaagattacgcattgaagcaaaggaacgagtgaagtctgtatttcatgcc
aaagagtttggaaaaataattaacttcaagaccccagaagatgctaggtggatcctcacg
aaactagaggaagcaagagaaccttccccgagattctga
DBGET
integrated database retrieval system
