Panthera uncia (snow leopard): 125925178
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Entry
125925178 CDS
T08832
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc04115
p53 signaling pathway
puc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125925178
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
125925178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
puc04121
]
125925178
Enzymes [BR:
puc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125925178
Ubiquitin system [BR:
puc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125925178
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125925178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
zf-RING_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
Beta-prop_EML
zf-C3HC4_3
Beta-prop_DCAF4
zf-RING_5
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_4
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
125925178
NCBI-ProteinID:
XP_049489957
LinkDB
All DBs
Position
F1:complement(17332565..17610014)
Genome browser
AA seq
729 aa
AA seq
DB search
MSGSRQAGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSAAAAAAASGGAAQAAGSGGLG
GPARPVLVAAAVSGSGGGAVSAGQSRLSCAARPSAGVGGSSSSLGSGSRKRPLLPPLCNG
LINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDH
LYPNFLVNELILKQNQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLML
ELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGL
YSPVSEDSTVPQFEAPSPSHSSIIDSTEFNQPPGFSGSSQTKKQPWYNSTLASRRKRLTA
HFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSS
IVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYH
KNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWS
TNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAV
SYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSENN
SLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQ
GTIKVLELV
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggagccgccaggccgggtcgggctccgccgggaccagccctggctcctcggcg
gcctcctcggtgacttccgcctcctcgtccttgtcctcttccccgtcgcccccttccgcg
gcggccgcggcggcggcgtccggcggggcggcccaggccgcgggctcgggcggcctcggg
ggcccggcgcggcctgtgctggtggcggccgccgtgtccggcagcggcggcggggcggtg
tccgccggccagtctcggctcagctgcgcggccaggcccagcgccggcgtaggagggagc
agctccagcctcggcagcggcagcaggaagcgacctctgcttcccccgctgtgcaacggg
ctcatcaactcctacgaggacaaaagcaacgacttcgtgtgccctatctgctttgatatg
attgaggaagcatacatgacgaaatgtggccacagcttttgctacaagtgtattcatcag
agtttggaggataataatagatgtcccaagtgtaactatgttgtggataatattgaccat
ctgtatcctaatttcttggtgaatgagctcattctcaaacagaaccaaagatttgaggaa
aagaggttcaaattggaccactcagtgagtagcaccaatggccacaggtggcaaatattt
caggatttgttgggaactgaccaagataaccttgatttggctaatgtcaacctcatgttg
gaattactagtgcagaagaagaaacagctggaagcagaatcacatgcagcccaactacag
atccttatggaattcctcaaggttgcaagaagaaataagagagagcaactggaacagatc
cagaaggagctgagtgttttggaagaggatattaaaagagtggaagaaatgagcggcttg
tactctcctgtcagtgaggatagcacagtgcctcaatttgaagctccttctccatcacac
agtagtattattgattccacagaattcaaccaacctcctggtttcagtggcagttctcag
acaaagaaacagccttggtataacagcacgttagcatcaagaagaaaacggcttactgct
cattttgaagacttggaacaatgttacttttctacaaggatgtctcgtatttcagatgat
agtcgaactgcaagccagttggatgaatttcaggaatgcttgtctaagtttacccgatat
aattcagtacgacctttggctacgttgtcctatgctagtgatctctataatggttccagc
atagtctctagtattgaatttgaccgggattgtgactattttgcaattgctggagttaca
aagaagattaaggtctatgaatatggcacagtcattcaagatgccgtggatattcactac
cctgaaaatgaaatgacctgcaattccaaaatcagctgtatcagttggagtagttaccat
aagaatctgttagccagcagtgattatgaaggcactgtcatcctatgggatggattcaca
ggacagaggtcaaaggtctatcaggaacatgagaaaaggtgttggagtgttgactttaat
ttgatggatcctaaactcttggcttcaggttctgatgatgcaaaagtgaagctatggtct
accaacctagacaactcagttgcaagcattgaggcgaaggctaacgtgtgctgtgttaaa
ttcagcccctcttctagataccatttggctttcggctgtgcagatcactgtgtccactac
tatgatcttcgtaacactaaacagccaatcatggtattcaaaggacaccgaaaagcagtg
tcttatgcaaagtttgtgagtggtgaggaaattgtctctgcctcaacagacagccaacta
aaactgtggaatgtagggaaaccatactgtctacgttctttcaagggtcacatcaatgaa
aaaaacttcgtaggcctcgcttccaatggcgactatatagcttgtggaagcgagaacaac
tctctttacctgtactataaaggactttctaagactttgctaacttttaagtttgatacg
gtcaaaagtgttctggataaagaccgaaaagaagatgataccaatgaatttgttagtgct
gtgtgctggagggcattgccagatggggagtccaatgtgctgattgctgctaacagtcag
ggtacaattaaggtgctggagttggtatga
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