Panthera uncia (snow leopard): 125925210
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Entry
125925210 CDS
T08832
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc03013
Nucleocytoplasmic transport
puc05014
Amyotrophic lateral sclerosis
puc05200
Pathways in cancer
puc05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125925210
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125925210
09162 Cancer: specific types
05216 Thyroid cancer
125925210
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125925210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
puc03019
]
125925210
Messenger RNA biogenesis [BR:
puc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125925210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
Imm70
YwqH-like
Motif
Other DBs
NCBI-GeneID:
125925210
NCBI-ProteinID:
XP_049490017
LinkDB
All DBs
Position
F1:21476813..21541305
Genome browser
AA seq
2439 aa
AA seq
DB search
MPSSGSVSRSRQRGRPMASRSFDGSRRGSLRRAGARESRSEVVEAGAQASGSSWSSPFFS
GSAAPAAGPAAPGHIDMAAVLQQVLERTELNKLPKSVQNKLEKFLADQQSEIDGLKGRHE
KFKVESEQQYFEIEKRLSHSQERLVNETRECQSLRLELEKLNNQLKALTEKNKELEVAQD
RNIAIQSQFTRTKEELEAEKRDLVRTNERLSQELEYLTEDFKRLNEKLKESNATKGDLQL
KLDELQASDVSVKYREKRLEQEKELLHNQNTWLNTELKTKTDELLALGREKGNEILELKC
NLENKKEEVSRMEEQMNGLKMSNENLQKHVEELLTKLKEAKEQQASMEEKFHNELNAHIK
LSNLYKSAADDSEAKSNELTRAVDELHKLLKEAGEANKAIQDHLLEVEESKDQMEKEMLE
KIGKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVE
TQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKE
IQRLQEGTDKANKHSSVLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSA
DISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETREREEQETTSSKITELQLKLE
NALTELEQLRESRQHQMQLVDSIVRQRDMYRILLSQTTGVAIPLQASSLDDISLASTPKR
SSTSQTASTPAPVPVIESAEAIEAKAALKQLQEIFENYKKEKADNEKIQNEQLEKLQDQI
TDLRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMT
QDLRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQG
ILERSETETKQRLSGQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTET
NLHHNTKELLKNAQKEIATLKQHLSNMEVQLASQSSQRTGKGQPNNKEDVDDLLSQLRQA
EEQVNDLKERLKTSTSNVEQYRAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQL
EKKLMEVEKEKQELQDDKRKAIESMEQQLSELKKTLNSVQNEVQEALQRASTALSNEQQA
RRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASVRQHLEETTQKAESQL
LECKASWEERERMLKDEVSKCVSRCEDLEKQNRLLHDQIEKLSDKVVASVKEGVQGPLNV
SLSEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNA
EREKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDI
LPLQEANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVH
TKRIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLNKVRTEKETIQKDLDAKIIDI
QEKVKTITQVKKIGRRYKTQYEELKAQQDKAMETSAQSSGDHQEQHVSVQEMQELKETLN
QAETKSKSLESQVENLQKTLSEKETEARNLQEQTVQLQSELSRLRQDLQDRTTQEEQLRQ
QITEKEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKS
QYEGRISRLERELREHQERHLEQRDEPQEPTTKVPEQQRQITLKTTPASGERGIASTSDP
PTANIKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVE
SQEAMQSEGPVEHVPVFGSASGSVRSTSPNVQPSIPQPILTVQQQTQATAFVQPTQQSHP
QIEPANQELSPNIVEVVQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTIEASD
QVSDDTVEMPLPKKLKSVTPVGTEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYT
PMEDSEETSQSLQIDLGPLQSDQQTTTSSQDGQGKGDDVIVIDSDDEEEDDDENDGEHED
YEEDEEDEDDDEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGG
GESNQRAADSQNSGEGNAGTAEPSFSQDISREQQPSSASERQTPRAPQSPRRPPHPLPPR
LTIHAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPH
RTDGFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEE
ESGGRSVPTTPLQVAAPVTVFTESTTSDASEHASQSVPMVTTSTGTLSTTNETATGDDGD
EVFVEAESEGISSEAGLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFR
RVRLQTTLRQGVRGRQFNRQRGVSHAMGGRGGINRGNIN
NT seq
7320 nt
NT seq
+upstream
nt +downstream
nt
atgccctctagtggctcagtgtctagaagccgccaaagaggacgacccatggcatcccgg
agctttgacgggtcccgccgcgggagtctccggcgggcaggcgcgcgcgagtcccggagc
gaggtggtcgaggcgggcgcccaggcttctgggtcctcttggtcttcgcctttcttctcc
ggttctgctgcgccggccgctggccccgcggcccccggccacatcgacatggcggcggtg
ctgcagcaagtcctggagcgcacggaactgaacaagctgcctaagtccgtccagaacaaa
cttgaaaagttccttgccgaccagcaatccgagatcgatggcctgaaggggcggcatgag
aaatttaaggtggagagtgaacaacaatactttgagatagagaagaggctgtcccacagc
caggagaggcttgtgaatgaaacccgagagtgccaaagcttgaggcttgagctcgagaag
ctcaacaatcaactgaaggcactaactgagaaaaataaagaacttgaagttgctcaggat
cgcaatattgccattcagagccagtttacaaggacaaaagaagaattagaagctgagaaa
agagacttagttagaaccaatgagagactatctcaagaacttgaatatttaacagaggat
tttaaacgtctaaatgaaaaacttaaagaaagcaatgccacaaagggtgatcttcagtta
aaactggatgaacttcaagcttctgatgtttctgttaaatatcgagaaaaacgtttggag
caagaaaaggagttattacataatcagaatacatggctgaatacagagttgaaaactaaa
actgatgaacttctggctcttggcagagaaaaaggaaatgagattctagagcttaaatgt
aatcttgaaaacaaaaaagaagaggtttccagaatggaagaacagatgaatggcttgaag
atgtcaaatgagaatcttcaaaaacatgtagaagagctgttgaccaaactaaaagaggcc
aaggaacagcaggccagtatggaagagaaattccacaatgaattaaatgctcacataaaa
ctctctaatctatacaagagtgctgctgatgactccgaggcaaagagcaatgaactgacc
cgagcagtagatgaactgcacaaacttttgaaagaagctggagaagccaataaagcaatt
caagatcatcttctagaagtggaggaatctaaagatcaaatggaaaaagaaatgcttgag
aaaataggaaagttggagaaggaattagagaatgcaaatgacctgctttctgccacaaaa
cgtaaaggagccatattatctgaagaagaacttgcagccatgtctcctactgcagcagct
gtagctaagatagtgaagcctggcatgaaattaactgagctgtataatgcttatgtggaa
actcaggatcagttgcttttggagaaactagagaataaaagaattaataaatatctagat
gaaatagtgaaagaagttgaagctaaagcaccaattttgaaacgccagcgtgaggagtat
gaacgtgctcagaaagctgtggcaagtttatctgttaagcttgaacaagctatgaaggag
attcaacgattgcaggagggcactgataaagctaacaaacattcatctgtgcttgaaaga
gacaatcaaagaatggaaatacaaataaaagatctttcacaacagattagagtgcttttg
atggaacttgaggaagcaaggggtaatcatgtaattcgtgatgaggaagtgagctccgct
gatataagtagttcatctgaagtaatatcacagcatctagtatcttatagaaatattgaa
gaacttcaacagcaaaatcaacgtctcttagtggcccttagggaacttggggaaaccaga
gaaagagaggaacaagaaacaacttcatccaaaatcactgagctgcagctaaaacttgag
aatgccctcactgaattagaacaactccgggagtcacgacaacatcaaatgcagcttgtt
gattctatagttcgtcagcgtgatatgtaccgtattttgttgtcacaaacaacaggagtt
gccattcctttacaagcttcaagtttagatgatatttctcttgcatcaactccaaaacgt
tcaagtacatcacagactgcttccactcctgctccggtacctgtaattgagtcagcagag
gctatagaagcaaaggctgctcttaaacagttgcaggaaatttttgagaattacaagaaa
gaaaaggcagataatgaaaaaatacaaaatgagcagcttgagaaacttcaggatcaaatt
acagatttgcgatcacaaaacaccaaaatatctacacaactagattttgcttctaaacgt
tatgaaatgttacaagataatgttgaaggatatcgtcgagaaataacatccctacatgag
agaaatcagaaacttactgcaacaactcaaaagcaggaacagattatcaatacaatgacg
caagatttgagaggagcaaatgaaaagctggctgttgcagaagtaagagcagaaaacttg
aaaaaggaaaaggagatgcttaaattgtccgaagtccgcctttctcaacaaagagagtct
ttgttagccgaacaaagagggcaaaacttgctgctgactaacctgcaaacaattcaggga
atattagagcgatctgaaacggaaaccaaacaaaggcttagtggccagatagaaaaactg
gaacatgagatatctcatctaaagaagaagttggaaaatgaggtggaacaaaggcataca
cttactagaaatctagatgttcaacttttggatacaaaaagacaactggatactgagaca
aatcttcatcataacacaaaagaactattaaaaaatgctcaaaaggaaattgctacatta
aaacagcacctcagtaatatggaagttcagcttgcttctcagtcctcacagagaactggc
aaaggtcagcctaacaacaaagaagatgtggatgatcttctgagtcagctaaggcaagca
gaagagcaggtgaatgatttgaaggagagactcaaaacaagtactagtaatgtggaacag
tatcgagcaatggttactagtttagaagaatctcttaacaaggaaaaacaggtgacagaa
gaagtacgtaagaatattgaagttcgtttaaaagagtcagctgagtttcagacacagttg
gaaaagaagttgatggaagtagagaaggaaaaacaggaacttcaggatgataagagaaaa
gccatagaaagtatggaacaacagttatctgagttaaagaaaacacttaacagcgttcag
aatgaagtacaagaagctcttcagagagcaagcacagctttgagtaatgaacagcaagcc
agacgtgactgtcaggaacaagctaaaatagctgtggaagctcagaataagtatgagaga
gaattgatgctccatgctgctgatgttgaagctctacaagctgccaaggaacaggtttcc
aaaatggcatcagtccgtcagcatttggaagaaacaacccagaaagcagaatcacagtta
ttggagtgcaaagcatcttgggaagaaagagaaagaatgttaaaggatgaagtttccaag
tgtgtgtctcgctgtgaagatctagagaaacaaaaccgattacttcatgatcaaattgaa
aaattaagtgacaaggttgttgcctctgtgaaggaaggtgtacagggtcccttaaatgtc
tctctaagtgaagaaggaaaatctcaagaacaaattttagaaattctcaggtttatacga
cgagaaaaagaaattgctgaaaccaggtttgaggtggctcaggttgagagtctgcgttat
cgtcaaagagttgaacttttagaaagagagctgcaggaactgcaggatagtctcaatgct
gaaagagagaaagtccaggtaactgcaaaaacaatggctcagcatgaagaactgatgaag
aaaaccgaaacaatgaatgtagtgatggagaccaataagatgctaagagaagaaaaagag
aggctagaacaggatttacagcagatgcaagcaaaggtaaggaaactggagttagatatt
ttacccttacaagaagcaaatgctgagctgagtgagaaaagcggtatgttgcaagcagag
aagaagttactagaagaagatgtcaaacgttggaaagcacgtaaccagcatctagtaagt
caacagaaagatccagatacagaagaatatcggaagctcctttctgaaaaggaagttcat
actaagcgtatccagcagttgactgaagaaattgggagacttaaagcggaaattgcaaga
tcaaatgcatctttgacgaacaaccagaacttaatccagagtctaaaggaagacttaaat
aaagtaagaactgaaaaggaaaccatccaaaaggacttagatgccaaaataattgacatc
caggaaaaagtcaaaactattactcaagtcaagaagattgggcgtagatacaagactcag
tatgaagaacttaaagcacaacaggataaggccatggagacctcggctcaatcttctgga
gaccaccaggaacagcatgtctcagtccaggaaatgcaggagctcaaagaaaccctcaat
caagctgaaacaaagtcaaaatcactggagagtcaagtagagaatctgcagaagacatta
tctgaaaaagagacagaagcaagaaatctacaggaacagactgtgcagcttcagtctgag
ctttcacgactccgccaggatcttcaagatagaaccacacaagaggagcaactccgacag
cagataactgaaaaggaagaaaaaacaagaaaggccattgtagcagcaaaatcaaaaatt
gcgcatttagctggtgtaaaagatcagctaactaaagaaaatgaggagcttaaacaaagg
aatggagccttagatcagcagaaagatgaattggatgttcgaatgactgctcttaagtcc
cagtatgaaggtcgaattagtcgcttggaaagagaactccgggagcatcaagagagacac
cttgagcagagagatgagcctcaagaacctactactaaggtcccagaacagcagaggcag
atcacattgaaaacaactccagcttctggtgaaagaggaattgccagcacatcagaccca
ccaacagccaatatcaagccaactcctgttgtgtctactccaagtaaagtgacagctgca
gctatggctgggaataagtcaacacccagggctagtatccgcccaatggtcacacctgca
actgttacaaatcctactacaaccccaacagctacagtgatgcccactacacaagtggaa
tcacaggaagcgatgcagtcagaagggcctgtggaacatgttccagtgtttggaagtgca
agtggttctgttcgttctactagtcctaatgtccagccttcgatccctcaacccatttta
accgttcagcaacaaacgcaggctacagcttttgtgcaacccacccagcagagtcatcct
cagatagagcctgcaaatcaagagctgtcccccaacatagtagaagttgtacagagttcg
ccagttgagcggccttctacttccacagcagtatttggcactgtttcggctaccccaagt
tcttctttgcctaaacggacacgtgaagaggaagaggatagcaccatagaagcatcagac
caagtctctgatgataccgtggaaatgcctcttccaaagaagttgaaaagtgttacccct
gtaggaactgaggaagaagttatggcagaagaaagtactgatggagaggtagagactcaa
gtatacaaccaagattctcaagattccattggagaaggagttacccagggagattatact
ccgatggaagacagtgaagaaacctctcagtctctacaaatagaccttggaccccttcag
tcagatcagcaaacgacaacttcatcccaagatggtcaaggcaaaggagatgatgtcatt
gtaattgacagtgacgatgaagaagaggatgatgatgaaaatgatggagaacatgaggat
tatgaagaagatgaggaagacgaggatgatgatgaggatgacacagggatgggagatgag
ggtgaagatagtaacgaaggcactggtagcgcagatggcaatgatggatatgaagctgat
gatgctgagggtggtgatggaactgatccaggtacagaaacagaagaaagtatgggtgga
ggtgaaagtaatcagagagctgctgattctcagaacagtggtgaaggcaatgcaggtact
gcggagccatctttttcccaggacatttctagagaacaacagccatcatcagcatctgaa
agacagactcctcgagcacctcagtctccgagacgccctccacaccctctgcccccacgc
ctgaccattcatgctccacctcaagaattgggaccaccagttcagagaattcagatgact
cggaggcagtctgtaggacgtgggcttcagttgactccgggaataggtggcatgcagcag
cacttttttgatgatgaggacagaacagttcccagtactccaactcttgtggtaccacat
cgcactgatggatttgctgaagcaattcactccccacaggttgctggtgttcctagattc
cggtttgggccacctgaagatatgccacagacaagttcaagtcactctgatcttggccag
cttgcttctcaaggaggtttaggaatgtatgaaacacccctcttcctagctcatgaagaa
gagtcaggtggccgaagtgttcccaccacacctctacaagtggcagcccctgtgaccgta
tttactgagagtaccacctctgatgcttcagagcacgcctctcagtcggttccaatggtg
acaacgtccactggtactttatccacaacaaatgaaacagcaacaggtgatgatggagat
gaagtatttgtggaggcagaatctgaaggtattagttcagaagcaggcctagaaattgat
agccagcaggaagaagaacctgttcaggcatctgatgagtcagatcttccttccaccagt
caggatcctccttccagttcttctgtagatactagcagtagtcaaccaaagcctttcaga
cgagtaagacttcagacaacattgagacaaggtgtccgtggtcgtcagtttaacagacag
agaggtgtgagccatgcaatgggagggagaggaggaataaatagaggaaatattaattaa
DBGET
integrated database retrieval system
