Panthera uncia (snow leopard): 125925238
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Entry
125925238 CDS
T08832
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X1
KO
K14409
protein SMG7
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125925238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
puc03019
]
125925238
Messenger RNA biogenesis [BR:
puc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
125925238
mRNA cycle factors
Common to processing body (P body) and stress granule
125925238
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
125925238
NCBI-ProteinID:
XP_049490059
LinkDB
All DBs
Position
F1:complement(23985888..24076237)
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AA seq
1186 aa
AA seq
DB search
MSLQSAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEV
KTKWSVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHVTVI
NLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGILCKCPLQNKSQEESYNAYP
LPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSFHPHEEDLSSTNATPLPEEFE
LQGFLALRPSFRNLDFSKGHQGITGDKEGQQRQIRQQRLISIGKWIADNQPRLIQCENEV
GKLLFITEIPELILEDPSEAKENLILQETSMIESLAADGNPGLKSVLSTGRNLSNNCDTG
EKPMVTFKENIKPREVNRDQGRSFPPKEVRRDYSKGITVTKNDGKKDNNKRKTETKKCTL
EKLQETGKQNVAVQVKSQTELRKTPVSEARKTPVTQTPSQASNSQFIPIHHPGAFPPLPS
RPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQSHIPYSQ
QRPSGPGPMNQGPQQPQPPSQQPLTSLPAQPTAQSTSQLQVQALAQQQSPTKAVPALGKS
PPHHSGFQQYQQADASKQLWNPPQVQGPLGKIMPVKQPYYLQPQDPIKLFEPSLQPPVMQ
QQPLEKKMKPFPMEPYNHNPSEVKVPEFYWDSSYSMADNRAVMAQQASVDRRGKRSPGVF
RPEQDPVPRMPFEDPKGSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGR
SLFKSLLEKPSELMSHSSSFLSLTGFSLNQERYPNNSMFNEVYGKNLTTGSKTELNPSLA
PQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGP
IGTPDNRDRRTADRWKTDKPAMGGFGIDYLSATSASESSWHQASTPSGTWTGHGPSMEDS
SAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGAMNPPH
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcagagcgcgcagtatctccggcaggcagaagtcctgaaggctgacatgaca
gattctaagctgggtccagctgaggtctggacatccaggcaggctctgcaggacctgtac
cagaaaatgctagttactgatttggagtacgctttagacaagaaagtagaacaggatctc
tggaatcatgcctttaagaatcagatcacaacactacaaggccaggcaaagaatcgagca
aacccgaatcggagtgaagttcaggcaaacctatctctgttcctagaggcagctagtggc
ttctatactcagttattacaagaactgtgtacagtgtttaatgtagatttaccatgccgt
gtgaagtcttcccaattgggaattatcagcaataaacagacgcataccagcgccatagtg
aagccacagtctagctcctgttcctatatctgccagcactgcctcgtccaccttggagac
attgctcgatacagaaaccagaccagccaggcagagtcctactataggcatgcagctcag
cttgtcccctctaatggtcagccttacaatcagttggctatcttagcttcttccaaagga
gaccatctgaccacaattttctactactgcagaagcatcgctgtgaagttcccgttccca
gctgcctccactaatctacaaaaagcactttctaaagcactggaaagccgggatgaggtg
aaaaccaaatggagtgtttctgacttcatcaaggcctttattaaattccacggtcatgtg
tacctgagtaagagcttggaaaagttgagcccacttcgagagaaattggaagaacagttt
aagaggctgctgttccaaaaagctttcaactctcagcagttagttcacgtcactgtcatc
aacctgtttcaacttcatcaccttcgtgactttagcaatgaaacagagcagcatagttat
agccaagatgagcagctgtgttggacacagttgctggccctctttatgtcttttcttggc
atcctgtgcaagtgtcctctccagaacaagtctcaggaggagtcctacaatgcctatccc
cttcctgcagtcaaggtctccatggactggctgagactcagacccagggtctttcaggag
gcagtggtagatgaaagacagtacatttggccctggctaatttctcttctaaatagtttc
catccccatgaagaggatctttcaagtactaatgctacaccacttccagaggagtttgag
ttacaaggattcttggctttgagaccttctttcaggaacttggatttctccaaaggccac
cagggtattacaggagacaaagaaggtcagcaacgacaaatacgacagcagcgcttgatc
tctataggcaaatggattgctgataatcagccaaggctgattcagtgtgaaaatgaggta
gggaaattgttgtttatcacagaaattcctgagttaatactggaagaccccagtgaagcc
aaagagaacctcattctgcaagaaacatccatgatagagtcactggctgcggatgggaac
ccaggactgaaatcagtgctgtccacgggccgtaatctaagcaacaactgtgacacagga
gagaaaccaatggtcaccttcaaagagaacattaagccgcgcgaagtgaacagagaccaa
ggaagaagttttcctcccaaagaggtgagaagggactatagcaaaggaataactgtaact
aagaatgatggaaagaaggacaacaacaagaggaaaacagaaaccaagaaatgcacctta
gaaaagttacaggaaacaggaaagcagaatgtggcagtgcaggtgaaatcccagacagaa
ctaagaaagactccagtgtctgaagccaggaaaacacctgtaactcaaaccccaagtcaa
gcaagtaactcccagttcatccccattcatcaccctggagccttccctcctcttcctagc
cggccagggttcccgcccccaacatatgttattccccctcctgtggcattttctatgggc
tcaggttacaccttcccagctggtgtttctgtcccaggaacctttcttcagcctacagct
cactctccagcaggaaaccaggtgcaagctgggaaacagtcccacattccttacagccag
caacggccctctggaccagggccaatgaaccagggacctcaacagccacagccaccttcc
cagcaaccccttacatctttaccagctcagccgacagcacagtccacaagccagttgcag
gttcaagctctagctcagcagcaatcccccacaaaagccgtgccggctttggggaaaagc
cctcctcaccactctgggttccagcagtatcaacaggcagatgcctccaaacagctgtgg
aatccccctcaggttcaaggcccattagggaaaatcatgcctgtgaaacagccctactac
cttcagccccaagaccccataaaactgtttgagccttcattgcaacctcctgtaatgcag
cagcagcctctagagaaaaaaatgaagccttttcccatggagccatataaccataatccc
tcagaagtcaaggtcccagagttctactgggattcttcctacagcatggctgataacaga
gctgtcatggcccagcaagcaagtgtggaccgcagaggcaaacggtcaccaggagtcttc
cgtccagagcaggatcctgtgcccaggatgccatttgaggaccccaagggctcccctctg
cttcctccggacctgttaaagagtctggctgccttggaggaagaggaagagctgattttt
tctaaccctcctgatctttacccagctctgctgggccctctcgcctctcttcctggacgg
agcctctttaaatccttgttggagaagccctcggagctcatgtcacactcatcctctttc
ttgtccctcaccggattctctctcaatcaggaaagatacccaaataacagtatgttcaat
gaggtttatgggaaaaacctgacaaccggctccaaaacagaacttaatccttcgctggcc
ccccaggagacatcactgtactccctctttgaagggaccccatggtctccatcacttcct
gccagttcagatcattcaacaccagccagccagtctccccattcctctaacccaagcagc
ctgccgagctcccctccaacacataaccataattctgttccattctccaactttggacct
atcgggactccagataacagggataggagaactgcagatcggtggaaaactgataagcca
gccatgggtgggttcggcattgattatctctcagcaacatcagcctctgagagcagttgg
catcaggccagcactccaagtggcacctggacaggccacggcccctccatggaggattcc
tctgctgtcctcatggaaagcctaaagtctatctggtccagttccatgatgcatcctgga
ccttccgctctggagcagctgttaatgcagcagaaacagaaacagcagcggggacaaggc
gccatgaaccctccacactga
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integrated database retrieval system
