Panthera uncia (snow leopard): 125925957
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Entry
125925957 CDS
T08832
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
puc
Panthera uncia (snow leopard)
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
puc03019
]
125925957
Messenger RNA biogenesis [BR:
puc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125925957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
HEAT
Motif
Other DBs
NCBI-GeneID:
125925957
NCBI-ProteinID:
XP_049491235
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All DBs
Position
D4:44115196..44429158
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AA seq
1805 aa
AA seq
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MSDDIRKRFEFPNSLIQSQAVGHLIAAVLKESGFSEKIHQSTDQTPALNLLWEKCCGDNA
VVRTACCEALVALVAQDHAEFSYVLNGILNLIPSTRNTHGLLKAIMKLLQMQALKEGQSG
EKNIRNLYTIRNRPQPLITVLEHRPDCWPVLLQQLTAFFQRCPERSEVSCIQIMAPFLWY
LYCEPSQLEEYAKLRLTLLKVLLQPRVPGDTEQPSTLEQQILQLCCDMVPCLQVKDLVQT
TEVMTFIEEVYLSLLRHPIFWKIQLSQLTLQLLCVCEVSLKITGECSSLIHLLEHSVELL
KEDFPVELVIIGIALLLLQTPASQQKPILSLALKLVSFAEGQKIPKASLVLVMPLLQILS
STALEDCMSTDEEGPSRQQLAVNLLEIVQQESCRDDRQKLSYKLAFPITGMYGSIFTAWR
ILEVMREKSAASDWLFSVESLLPITTVIPAHVFLLLAHLLVEDQGQNLRQILKVTTELAQ
ADSSQVPNLIPVLMFKLGRPLEPVLYNDILYTLPTLGVHKVCIGQILRVIQLLGTTPHLR
AVTVRLLTSLWEKQDRVYPELQRFMAMSDVPSLSVGKEVQWEKLIAKAASIRDICKQRPY
QHGADMLAAISQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDTR
PLILKTLSELFSLVPSLTVNTAEYENFKVQVLSFLWTHTQNKESIVANAAYKSLSHFSAG
EHTILHLPEEIRPEIPIPDELEEDEDDEGDEKDLDLSIPGSCYLKLLSLTAPSVLPALEE
FFTSLVKQEMVNMPRGVYHSALKGGVRSDQGKTVAGIPNFILKMYETNKQPGLKPGLAGG
MLFCYDISTYQSKDGKPLNRLMASRGRSFKQTSLALVHEVHIQLSEWHRAIFLPQAWLAY
MSRAYHAILQGRIGELDLQLKHGKEGPEEVQYKKGTAWLWVRDMLTDEITKTAVKESPVV
KGNALLALSSLAVVVSRHEASLSSDSEGVPEVHPNFLSMKEWVSMVSDTLLVIVDSHHQP
RGQIFSSFYYKSYSGENTASAIARSAAATALSLLVQVFIISCKEKVEEILNMLTARLPGK
PRADESQAVQIHMGLALGMFLSRLCEEKLSDISGQQMNLLLMKSLDALENCCFDASLEYN
TGCILGVGLVLSLMSHSSRMESRVHVAASLRKLSTYLDDSGSQSRTFQEVLAYTLSCVCT
SAFSAGIIEATEAEDIMNKLQLLVENNQQTSGFALALGNLVHGLSVCGHGKAEDLGHRLL
PAWIRIVLTEGTPTMLCLAALHGMVALVGSEGDVMQLKAEAIQTSHFQARLNEVIKTVTQ
VISVSGVIGLQSNALWLLGHLHLSTLSSSQSRTSVPTDYSYLPESSFIRAAIGFFITGGK
KGPESVPPSLLKVVMKPIAAVGESYQFPPVSWAALLSPLMRLNFGEEIQQLCLEIMVTQA
QSSQNAAALLGLWVMPPLIHSLSLNVKKYLLVSTPLWIKHVSDEQMAGFVENLMVAVFKT
ASPLPNPELCMSALQGLSQAMKLPSPAHHLWSLLCEATGKIFDLLPKKIRRNDLELYISV
AKCLSEMTDDEANRVAQITESSVEKAAFVRLYLVSQGRFPLTGLTDILSVAMQHREKDTL
AWMVLHGLYQARIVSHANTGVLKRMEWLLELMGYIRNLAYQSTSVQNVALDEALDFLLLI
FAIAVVAWADHAAPLLLGLSASWLPWHQENGPAGSASSFLGRSPMHRVTLQETLTLLPSS
MPILLQKEPWKEQTQKFIDWLFSIMESPKEGLSAKSRDLLKATLLSLRILPEFKKKAVWT
RAYGW
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgatatcaggaaaaggtttgaatttccaaattctcttatccaatcacaggct
gtgggtcatctcattgctgccgtcctaaaggaaagtggtttttcagaaaagatccaccaa
tccacagaccagactccggctttgaacttgctgtgggagaagtgttgcggtgataatgcg
gtggttcgaacggcctgctgcgaggctctggtggcactcgtcgcccaggatcacgcagag
ttcagctatgtgctcaatgggatactcaacctgattccgtcgaccaggaatacacatggc
ttgctaaaagccattatgaagttattacaaatgcaagctctaaaggaaggacaaagtggg
gagaagaatattcggaatttatatactataagaaatcgtcctcagcctttgatcactgtg
cttgaacatagacctgattgctggccagtacttttgcagcagctgacggcttttttccag
cgatgtcctgaaaggtcagaagtctcatgcatccaaataatggcaccatttctgtggtat
ctgtattgtgaaccatctcagttagaagaatatgctaaactccgactaaccctgctgaaa
gtcttacttcagccccgggttcctggtgacacagaacagccatcaacattggaacaacag
atacttcaactgtgctgtgacatggttccatgtctgcaggtaaaagatttggtccagaca
acagaagtgatgacgtttattgaagaagtatatttaagccttctgcgtcatcccattttc
tggaaaattcagcttagccagctgacccttcagctcttgtgtgtctgtgaagtcagctta
aagataactggggaatgctcctcgttaattcaccttttagagcacagcgttgaacttctg
aaggaggattttcctgttgaactggtcataattggaatagctttactgcttctacagact
ccggcaagtcagcagaagccgatcttaagtctggctctgaagctcgtctcttttgctgag
ggtcagaaaatcccaaaggcctccttggtgctggtgatgccccttctgcagatcctgtct
tctactgccttggaagactgtatgtccacggacgaagaaggtccctctaggcagcagttg
gctgtaaaccttttggaaatagtacagcaggaatcctgcagagacgaccgccagaagctc
tcctacaagcttgcgttccccataaccggcatgtatggatcaatatttacagcctggagg
atcctcgaagtgatgagagaaaagtctgctgcaagtgactggttgttttccgtagagtcc
ttgctccctataaccacagtaatccctgcgcatgtttttcttttgttggctcacctcctt
gttgaagatcaaggacaaaatcttcgccaaatactgaaggtcactacagaattggcccaa
gcagattcctctcaggtaccaaatctgattccagttttgatgttcaaattgggaagacca
ctggaacctgtattatataatgatatcttgtatactttgcctacacttggtgttcacaag
gtgtgcataggacaaattctacgagtgatccaacttcttggaactactccacacctaaga
gctgtcactgtgcgcttgttgacatctttgtgggaaaagcaggatcgtgtatatcctgaa
ctgcagcgtttcatggccatgtctgacgtgccttctctgtctgtgggcaaggaagtccag
tgggagaaactcatcgctaaagcagcatcgataagagacatatgtaagcaaaggccctat
cagcatggagcagacatgttggcagccatttcccaggtgttgaatgagtgcaccaaacct
gaccaagccactccagcagccttggtgctacaaggtcttcatgccctctgccaagctgag
gttgtttgcattcgctccacgtggaatgctctctccccgaagctcagctgtgacacgaga
cctctcattttgaagaccctcagtgaactgttctctctggttccttccttgacagtcaat
acagctgaatatgagaattttaaagtccaagtcctcagcttcctctggacccacactcaa
aacaaggaatcaattgtagcaaacgctgcctataaatctctgtcacattttagcgcggga
gagcataccattcttcatctgcccgaagagataagaccagaaatccctattcctgatgag
ctagaagaagatgaagatgatgagggtgatgaaaaggatctggatctttccattcctggc
tcttgctatctcaaactattgtcgcttactgctccttcggttttaccagctttggaggaa
ttttttacatctcttgtgaagcaagaaatggtgaatatgccccgtggagtatatcactct
gcattaaaaggaggtgttcgctcagaccaaggaaagaccgtagcaggaatccccaatttt
attttgaaaatgtatgaaacaaacaagcaaccgggtttgaaacctggccttgcaggtggt
atgttattttgttatgatatttcaacgtaccagagtaaagatggcaaaccattgaatcga
ctgatggccagtagagggcgaagtttcaagcagacctcgcttgctcttgtgcatgaggtt
cacatccagctttctgagtggcaccgtgcgattttcctgccacaggcctggctggcgtat
atgagtcgagcctaccatgccattttacagggcagaataggagaactggatttgcagttg
aaacatgggaaggaaggacccgaggaggtgcagtacaaaaaaggcacagcctggctctgg
gtccgagacatgttgactgatgagatcaccaagacggctgtgaaggagagcccagtggtc
aagggcaacgcgctgttagccttaagcagccttgctgtcgtcgtatccagacacgaagcc
agcctctcctctgactctgagggggtcccggaggttcatcctaatttcctttcaatgaaa
gagtgggtttccatggtgtctgatactctcctggtcattgtggatagccatcaccaaccc
agaggacaaatcttctcctcattttattataaatcctattctggtgaaaacacagccagt
gccattgcccgctcggctgccgccacggctttgtctctcctcgtgcaagttttcattatc
tcttgcaaagagaaggttgaggaaatcctcaacatgctgactgccaggttacctgggaaa
ccaagagctgatgagtctcaagccgtgcaaatccacatgggccttgctttggggatgttt
ctgtcccgcttgtgtgaggagaaactcagcgatatatctggccaacagatgaacctcctt
ctgatgaagtctttggatgccctggaaaattgctgctttgatgctagtcttgaatataac
acgggctgtatattgggagttggacttgttctgtccctcatgagccacagcagccgaatg
gagtctcgagttcatgtggcagcatcgcttcggaagctgtctacctacctggatgacagt
gggagccaaagcagaacatttcaggaggtccttgcctatactctcagctgtgtatgcaca
tcagcattcagtgccggaatcattgaggctaccgaggctgaagatatcatgaacaagctt
cagctgttggtagaaaacaaccaacagacgtcaggttttgccctagcgttaggaaacctg
gttcacggattgtctgtgtgtggacacggaaaagcggaggacttgggccaccggctgctc
cctgcctggatcagaattgttctgacagagggcactccgacaatgctctgccttgcagct
cttcatggcatggtggccttggtgggctctgaaggggatgtaatgcagctgaaggcagaa
gccatccagacctctcattttcaagccagacttaatgaagtcattaaaactgtaactcag
gtcatcagcgtgtctggagtgattggtcttcagtcaaatgcgctctggcttctgggccat
ctccatctgtctactctgtcctcgagtcaaagtaggacctccgttcctaccgactatagc
tatttgcccgagagcagttttattagagcagccattggcttcttcattacaggaggaaaa
aaaggtcctgagtctgtgcctccttcccttctcaaagtcgtgatgaaacccatcgcagct
gttggagagagctaccagttcccccccgtgagctgggccgcgctcctctcgccactcatg
aggctaaacttcggagaagaaatacagcagctgtgcctggaaattatggtgacgcaggcg
caatcatcccagaatgcagctgcgctgttgggactgtgggtgatgccaccactgatccac
agtctgagtttgaacgtcaagaaatacctcctggtttctacacctctgtggataaaacac
gtctcagacgaacagatggcgggttttgttgaaaacttaatggtggcggtgtttaaaacg
gcttccccacttcccaatcccgagttatgcatgagtgccttacagggcctgagtcaggcc
atgaaactgcccagccctgcccaccacctctggagtctgctctgcgaagccaccgggaag
atttttgaccttctgccaaagaagattcggagaaatgatctagagctatatatcagtgta
gcaaaatgcctctcagaaatgacagatgatgaagccaatcgagttgcccagattactgag
agcagcgtagaaaaggctgcctttgtcagactgtacttggtctctcaaggacgattcccc
ttgacgggcttgactgatatactcagcgttgctatgcagcaccgtgaaaaagacacacta
gcttggatggtactgcacggtttataccaagcccggattgtgagccatgccaacacaggc
gtgttgaagagaatggaatggctcttggaactgatgggttacatcagaaaccttgcatac
cagtctacctctgttcagaacgtggctcttgacgaggctttggacttcttgttgctgata
tttgcaattgcagtggttgcatgggcagaccatgcggcccctctcctccttggccttagt
gccagttggttgccatggcatcaggaaaatggcccagctgggtcagcttcgagcttcctt
ggcaggagtccaatgcacagggtcactctgcaggagactctcactctccttcccagtagc
atgcctattctgctgcagaaagagccatggaaggaacagacccagaagttcattgactgg
ctcttcagcatcatggaaagccccaaagaaggcctctcagccaaatccagggatcttttg
aaagccaccctgctgtccttgagaattctcccagagtttaagaagaaagccgtatggacc
agagcgtatggttggtga
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integrated database retrieval system
