Panthera uncia (snow leopard): 125926245
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Entry
125926245 CDS
T08832
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc02010
ABC transporters
puc04148
Efferocytosis
puc04975
Fat digestion and absorption
puc04979
Cholesterol metabolism
puc05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125926245
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125926245
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
125926245
04979 Cholesterol metabolism
125926245
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
125926245
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
puc02000
]
125926245
Transporters [BR:
puc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
125926245
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
125926245
NCBI-ProteinID:
XP_049491438
LinkDB
All DBs
Position
D4:complement(64409050..64541522)
Genome browser
AA seq
2263 aa
AA seq
DB search
MAYWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDAQRLLLYSQKDT
SMKDMHQVLRTLQQIENYNSSLKLQDFLVDNETFSGFLTYNLSLPRPTVDKMLGADVSLH
KVFLQGYQLHLTNLCSGSKLEEVIQLGDQEVSTLCGLPREKLDAAEQVLRSNVDILKPIL
TELNYTSPVLSKELTKATKTLLDSLGTLAQELFSMSSWSDMRQEVMFLTSVNSSSSSTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEEDAGTFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLIGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELS
PKIWTFMESNPEMDLVRTLLDSRSNDHFWEQQLDGLDWTAKDILAFLAKHPEDVQSANGS
VYTWREAFNETNQAIQTISRFMECVNLNKLEPIATEVRLINKSMELLDERKFWAGIVFTG
ITPGSVELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVLTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFV
FLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFMLYLPYVLCVAWQDYVGFTLKIFVS
LLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPMEEDGFNLTTSVSMMLFDTFIYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPGSSQKGISEICMEEEPTHLKLGVS
IQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRFEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKTSQLSGGMKRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSYLKKVVPELPPAGQSGGRGGEVQRLVALTQDVSAISNLIRKHVAEARLVE
DIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVD
AETSDGTLPARRNRRAFGDKQSCLRPFTEDDVIDPNDSDVDPESRETDLLSGMDGKGSYQ
VKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLE
LQPWMYNEQYTFVSNDAPEDTGTRELLNALTRNPGFGTRCMEGNPIPDMPCSVGEEEWTT
APVPQTITKLFQSGNWTMENPSPACQCSSDKIKKMLPVCPLGAGGLPPPQRKQNTADILQ
NLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSHSLPSSQEVNHAIKQV
KKHLKLAKDSSADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVMNNAILRANL
QKGENPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQ
ERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVL
ALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNN
INDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAV
EGVVFFLITVLIQYRFFIRPRPVNARLPPLNDEDEDVKRERQRILDGGGQNDILEIKELT
KIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSIL
SNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYG
EKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVV
LTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEF
FGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFV
NFAKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6792 nt
NT seq
+upstream
nt +downstream
nt
atggcttactggccacagttgaggttgctgctgtggaagaacctcactttcagaagaaga
caaacatgtcagctgttgctggaagtggcctggcccctatttatcttcctgatcctgatc
tctgttcggctgagctacccaccctatgaacaacatgaatgccactttccaaacaaagcc
atgccctctgcaggaacgcttccttgggttcaggggattatctgtaatgccaataaccct
tgtttccgttatccgactcctggtgaggcccctggagttgttggaaactttaacaaatcc
attgtgtctcgcctgttctcagatgctcagcggcttcttttatacagtcagaaagatacc
agcatgaaggacatgcaccaagttctaaggacattacagcagattgagaattacaactca
agcttgaagcttcaggatttcctagtggacaatgaaaccttctctggattcctgacttac
aacctctctctgccaaggcctactgtggacaaaatgctgggggctgatgtcagtctccac
aaggtatttttgcaaggctaccagttacatttgaccaatctgtgcagtggatcaaaatta
gaagaggtgattcaacttggtgaccaagaagtttccacgctgtgcggcttgccaagggag
aaactggatgcagcagagcaagtacttcgttccaacgtggacatcctgaagccgatcctg
acagaactaaactatacatctcctgtcctgagcaaggaactgactaaggccacaaaaact
ttgctggatagtcttgggactctggcccaagagctgttcagcatgagcagctggagtgac
atgcggcaggaggtgatgttcctgaccagtgtgaacagctccagctcctccacccagatc
taccaggctgtgtcccgcattgtgtgtggccatccagagggtgggggcctgaagatcaag
tccctcaactggtacgaggacaacaactacaaagccctctttggaggcaacggcactgag
gaagatgctggcaccttttatgacaattctacaaccccttactgcaatgatttgatgaag
aatctggagtccagtcctctttcccgcatcatatggaaagctctaaagcctctgcttatt
gggaagatcctatatacacctgacactccagccacaaggcaggtgatggctgaggtgaat
aagacctttcaggaactggctgtgtttcatgatttggaaggcatgtgggaagagctcagc
cctaagatctggaccttcatggagagtaacccagaaatggaccttgttcggacactgttg
gacagcagaagcaatgaccacttttgggaacagcaattagatggcttagattggaccgct
aaagacatcctggcatttttggccaagcacccagaggatgtccaatctgccaatggctct
gtatacacctggagagaagccttcaatgagaccaaccaggcaattcagaccatctctcgt
ttcatggagtgtgtcaacctgaacaagcttgaaccgatagcaacagaggtccggctcatc
aacaagtccatggagctgctggatgagaggaagttctgggctgggatcgtgttcaccgga
atcactcctggcagtgttgagctgccccatcatgtcaagtacaagatccgaatggacatc
gacaatgtggagaggacaaataaaatcaaagatgggtactgggacccgggtcctcgggct
gacccctttgaggatatgcggtacgtctgggggggctttgcctacttgcaagatgtggtg
gagcaggcaatcatcagggtgctgactggcactgagaagaaaactggtgtttatgtgcag
cagatgccctacccctgttatgtcgatgacatcttcctgcgggtgatgagccggtcgatg
cctctgttcatgacgctggcctggatctactcggtggctgtgatcatcaagggcatcgtg
tatgagaaggaggcgcggctgaaggagaccatgcgcatcatgggcctggacaatggcatc
ctctggttcagctggttcatcagcagcctcattcctctgctcgtgagcgccggcctgctg
gtggtcatcctaaaattaggaaacctgcttccctacagcgaccccagcgtggtgtttgtc
tttctgtccgtgtttgctgtggtgaccatcctgcagtgcttcctgatcagcacactcttc
tccagagccaacctggcggcagcctgcgggggcatcatctacttcatgctctacctgccc
tacgtcctgtgcgtggcgtggcaagactatgtgggcttcacgctcaagatcttcgtgagc
ctgctgtctcctgtggcttttgggtttggctgtgaatactttgccctttttgaggagcag
ggcattggggtgcagtgggacaacctgtttgagagccccatggaggaagatggcttcaac
ctcaccacgtcagtctccatgatgctgttcgatacctttatctatggagtgatgacgtgg
tacatcgaggctgtctttccaggccagtatggaatacccaggccctggtattttccttgc
accaaatcctactggttcggtgaggaaagcgatgagaagagccaccctggttccagccag
aagggaatatcagaaatttgcatggaggaggaacccacacacctgaagctgggcgtgtcc
attcagaacttgatgaaggtttaccgagatggcatgaaggtggctgttgatggcctggcc
ttgaatttctatgagggccagattacctccttcctgggccacaatggagctgggaagacc
accaccatgtcaatcctgacggggttgttccctcccacctcgggcactgcctacatcctg
gggaaagacattcgctttgagatgagcaccatccggcagaacctgggggtctgtccccag
cacaatgtgctgtttgacatgctgactgtggaagaacacatctggttctatgcacgtcta
aaggggctctcagagaagcatgtgaaagcagagatggagcaaatggccctggatgttggt
ttgcctcccagtaaactgaaaagcaaaacaagtcagctctcaggtggaatgaagagaaag
ctgtctgtggctttggcctttgttgggggatccaaggttgtcattctggatgagcccaca
gctggcgtggacccttactcccgcaggggaatatgggagctactgctgaaatatcgacaa
ggccggaccattattctttccacacaccacatggatgaagcagacatcctgggggacagg
attgccatcatttcccatgggaagctgtgctgtgtgggctcctccctgtttctcaagaac
cagctgggaacaggctactacctgacccttgtcaagaaagatgtggaatcctccctcagt
tcctgcagaaatagcagtagcactgtgtcatacctgaagaaggtggtgcctgagcttccc
ccagctgggcagagtggaggcagaggaggagaggtgcagaggctggtggcgctgactcaa
gatgtatccgctatctccaacctcatcaggaagcatgtggctgaggcccggctagtggaa
gacattgggcatgagctgacttatgtgctgccctatgaagctgcaaaagagggggccttt
gtggaactcttccatgagattgatgaccggctctcagacctgggcatctctagttatggc
atctcagagactacgctggaagaaatatttctcaaagtggctgaagagagtggggtggac
gctgagacttcagatggcaccttgccagcaagacgaaacagacgggcctttggggacaag
caaagctgtcttcgcccattcactgaagatgatgtcattgatcctaatgattctgatgta
gacccagaatccagagagacagacctgctcagcgggatggacggcaaaggctcctaccag
gtgaagggctggaaactcacacagcagcagtttgtggcccttctgtggaagaggctgctg
attgccagacggagtcggaagggattctttgctcagattgtcctgccagctgtgtttgtc
tgcattgccctggtgttcagcttgatcgtgccaccctttggcaagtaccccagcctggag
cttcagccctggatgtacaacgaacagtacacatttgtcagtaatgatgctcctgaggac
acgggcacccgggaactcttgaatgccctcaccagaaaccctggcttcgggacccgatgt
atggaaggaaaccctatcccagacatgccttgctcagtgggggaagaggagtggaccact
gccccggttccccagaccatcacgaaactcttccaaagtgggaactggacgatggagaac
ccctcacccgcctgccagtgtagcagcgacaaaatcaagaagatgctgcctgtgtgtccc
ctgggggcaggggggctgcctcctccacaaaggaaacagaacactgcagacatccttcag
aacctgacgggaagaaacatttcggattatcttgtgaagacctatgtgcagatcatagcc
aaaagtttaaagaacaagatctgggtgaatgagtttaggtacggagggttttccctgggt
gccagtaattctcattcacttccttcaagtcaagaagttaatcatgccatcaagcaagtg
aagaaacacttgaagctggccaaggacagttctgcagatcgatttctcagcagcttggga
agattcatgacaggactagacacgaaaaataacgtcaaggtgtggttcaacaacaagggc
tggcatgccatcagctctttcttgaatgtcatgaacaatgccatcctccgggccaacctg
cagaagggagagaaccccagccagtatgggattaccgctttcaatcaccctctgaatctc
actaagcagcagctctcagaagtggctctgatgactacatcagtggatgtccttgtgtcc
atctgtgtcatctttgcaatgtccttcgtcccggccagctttgtggtgttcctgatccaa
gagcgggtcagcaaagcaaaacacctgcagttcatcagtggagtgaagcctgtcatctat
tggctctccaattttgtgtgggatatgtgcaactatgtggtccctgccaccctggtcatt
atcatcttcatctgcttccagcagaagtcttacgtgtcctctaccaacctgcctgtgcta
gcccttctacttttgctgtatgggtggtcgatcacacctctcatgtacccagcctccttc
gtgttcaagatccccagcacagcctatgtcgtcctcaccagcgtgaacctcttcattggg
atcaacggcagcgtggccacttttgtgctggagctattcaccaacaataaactgaataac
atcaatgatatcctgaagtctgtattcttgattttcccacatttttgcctgggacggggg
ctcatcgacatggtgaaaaatcaggcaatggctgatgccctggaaaggtttggggagaat
cgttttgtttcaccactgtcttgggacttagtgggacgaaacctcttcgccatggctgtg
gaaggggtggtattcttcctcatcactgttctgatccagtacagattcttcatcaggccc
agacctgtaaatgcaaggcttcctccattgaatgatgaggatgaagatgtgaagcgggaa
agacagagaattcttgatggtggaggacagaatgacatcttggaaatcaaggagctgaca
aagatctacagaagaaagaggaagcctgctgttgacaggatttgcgttggcattcctcct
ggcgagtgctttggacttctgggagttaatggggctgggaaatcatcaactttcaagatg
ttaactggagataccacggttaccagaggagatgctttccttaacaaaaatagtatctta
tcaaacatccacgaagtgcatcagaacatgggctattgccctcagtttgatgccatcacg
gagttactgactggaagagagcatgtggagttctttgccctcttgagaggagtcccagag
aaagaagttgggaaggttggtgaatgggcaattcgaaaactgggcctggtgaagtatgga
gaaaaatatgctggtaactatagtggaggcaacaaacgcaagctctcaacagccatggct
ttgattggcgggcctcctgtagtgtttctggatgaacctaccacaggcatggatcccaaa
gcccggagattcctatggaattgtgccttaagtattgtcaaggaagggagatcagtagtg
cttacatctcatagtatggaagaatgtgaagcgctgtgcactaggatggcaattatggtg
aatgggaggttccggtgtcttggcagtgtccagcatctgaaaaataggtttggagatggt
tatacgatagttgtacgaatagcagggtccaaccctgatctgaagcctgtccaggagttc
tttggacttgcctttccaggaagtgttctcaaagagaagcaccggaacatgctccagtac
cagcttccatcctcattatcttccctggctaggatattcagcatcctttcccagagcaaa
aagcgactccacatagaagactactctgtttctcagacaacacttgaccaagtatttgta
aacttcgccaaggaccaaagtgatgatgaccacttaaaggacttgtcattacacaaaaac
cagacagtagtggatgttgcagttctcacatcttttctccaggatgagaaagtgaaagaa
agttatgtatga
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integrated database retrieval system
