Panthera uncia (snow leopard): 125926497
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Entry
125926497 CDS
T08832
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc03013
Nucleocytoplasmic transport
puc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125926497
03015 mRNA surveillance pathway
125926497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
puc03019
]
125926497
Messenger RNA biogenesis [BR:
puc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125926497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
125926497
NCBI-ProteinID:
XP_049491939
LinkDB
All DBs
Position
E1:10319810..10342005
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AA seq
733 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSAGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGMEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAANCSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIVERPNKSHRHQGPGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRAGFRPVDAGGQLGGRSGETVKHEASYRSRRLEQTPVR
DPSPEADAQVLGSPEKEEAASEIPAAALDAAPPAPDRPIEKKSYSRARRTRIKAGDAVKV
AEEVPPPPEGLNPAPPVPETTPSPPAKTGAWEAPVDSTTSGLEQDVAQLNITEQNWTPGQ
PSFLQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQVRWLM
SRFFYTSFNSDEEVIWEECLRNLRKHFDATDLHVTSGRLLVVRSWKCSLCNAHRLFIAFC
FLNGISLKCFGMS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcgtcggcggcagcgcgcttcgcaggacacggaggacgaggagtctggcgca
tcgggctcagacagcggcggctccccggcgcggggcggcgggagctgcagcggtagcgct
ggaggcggtggcagcggctctctgccttctcagcgcggaggccgagctggggcccttcat
ctgcggcgggtggagagcgggggggcgaagagcgccgaggagtcggaatgtgagagtgaa
gatggcatggagggcgatgctgttctctcggattatgaaagtgcagaagactctgaaggt
gaagaaggggaatacagtgaagaggaaaactccaaagtggagctgaaatcagaagccaat
gatgctgctaattgttcagcaaaagaagagaagggagaagaaaagcctgacaccaaaggc
actgtaactggagagaggcagagtggggatggacaggagagcacagagcctgtggagaac
aaagtgggtaaaaaaggccctaagcatttggatgatgatgaggatcggaagaacccagca
tacataccccggaaagggctcttctttgagcatgatcttcgagggcaaactcaggaggag
gaagtcagacccaaggggagacagcgaaagctatggaaggatgagggtcgctgggagcat
gataagttccgggaagatgaacaggctccaaagtctcgacaggagctcattgctctttat
ggctatgacatccgctcagctcacaatcctgatgacatcaaaccccgaagaatccggaaa
cccaggtttgggagtcctccgcaaagagatccaaactggattgttgagcgaccaaacaag
tcccatcgccatcagggtcctgggggcaccctaccaccaaggacatttattaacagaaat
gctgcaggtactggccggatgtctgctcccaggaattactctcgatctgggggcttcaag
gaaggtcgtgctggttttaggcctgtggatgctggtgggcagcttggtggccgatctggt
gagactgttaaacatgaagccagttaccggtcacggcgcctagagcagactcctgtgagg
gatccatctccagaagctgatgctcaagtgcttggcagtcctgagaaggaagaggcagcc
tcagagattccagctgctgctcttgatgctgcaccaccagcccctgacaggcctattgag
aagaaatcctattcccgggcaagaagaacgagaatcaaagctggagatgcagtcaaggtt
gcagaggaggtgccccctccacctgaagggctgaacccagcgcctccagtcccagaaact
accccttctccacctgctaagactggagcctgggaggctccagtggattctactacaagt
ggacttgagcaagatgtggcacaactaaatataacagaacagaattggactccagggcag
ccttcgttcctacagccacgtgagcttcggggtatgcccaatcacatacacatgggagca
ggacctccacctcagtttaaccggatggaagaaatgggtgtccagggtgggcgagccaaa
cgctattcatctcagcggcagagacctgtgccggagcctcctgcccctcctgtgcacatc
agtatcatggaaggacattactatgatccattgcagttccagggaccaatctatacccat
ggtgacagccctgccccactgcctcctcagggcatgattgtgcagccagaaatgcacctt
ccccacccaggtttacatccccaccagacaccggcacctctccccaatccgggcctctat
cccccaccagtgtccatgtctccaggacagccaccacctcagcagttgcttgctcctact
tacttttctgctccaggcgtcatgaactttggtaatcctagctacccttatgctccaggg
gcactgcctcccccaccgcctcctcatctatatcctaatacgcaggtgagatggctaatg
agcagatttttctacacatcctttaattcagacgaggaggtgatatgggaagaatgctta
aggaatttgagaaaacatttcgatgccactgatttgcatgtaacatcaggacgcctcttg
gtggtcaggagctggaaatgcagcttatgtaatgcccatcgtctgtttattgccttctgt
ttcttgaatggtatttcattgaagtgttttggtatgtcttag
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