Panthera uncia (snow leopard): 125926545
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Entry
125926545 CDS
T08832
Name
(RefSeq) ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
125926545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
puc04054
]
125926545
Enzymes [BR:
puc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125926545
Pattern recognition receptors [BR:
puc04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
125926545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_19
AAA_22
Motif
Other DBs
NCBI-GeneID:
125926545
NCBI-ProteinID:
XP_049492022
LinkDB
All DBs
Position
E1:complement(11765022..11773610)
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AA seq
685 aa
AA seq
DB search
MIRSDSRRELRPYQWEVIMPALEGRNIIIWLPTGAGKTRAAAYVAKRHLETVDGAKVVVL
VNRVHLVTQHCEEFSRMLDKRWAIITLSGDMGPRAGFGHLARSHDLLICTAELLQMALTS
PEEEEHVELNAFSLLVVDECHHTHKDTVYNIILSRYLQHKLQRTRPLPQVLGLTASPGTG
GASTLDGAIDHILQLCANLDTWRIMSPQNYRPQLQEHSPQPCKQYNLCHRRSQDPFGDML
KKLMERIHNRLDMPELSRDFGTQTYEQQVVELSQDAAEAGLQQRRVYALHLRRYNDALLI
HDTVRAVDALASLREFYDRERATKTQVLHAERWLLAQFNDYKNELADLATRSPENPKLEM
LEQILQEQFGSSDGCRGILFTQTRQSAHSLLLWLQQQPGLQILDIRADLLIGAGNSSQNT
HMTQRDQQEVIRKFRAGILNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARGRAR
AGQSVYSFVATQGSRELRRELTNEALETLMERAVAAVQKMDEAEYQAKIRDLQRAALVKR
AAQAAQRENQRQQFLAEQVQLLCINCMVAVGHGSDLRKVEGAHHVNVNPNFSIYYTVSRG
PVVIDRTFKDWKPGGAIHCRNCGEAWGLQMIYKSVKLPALKVRSMLLETPRGRVQAKKWS
RVPFLVPDFDYLQHCTQNLSDFSLD
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgatcagatcagattccagaagggagctgcgaccctaccagtgggaggtgatcatgcct
gccctggagggcaggaatatcatcatatggctgcccacgggggctgggaagacccgggca
gctgcttatgtggccaagaggcatctagagactgtggacggagccaaggtggtcgtactg
gtcaacagggtgcacctggtgacccagcattgcgaggagttcagccgcatgctggacaaa
cgctgggccattataaccctgagtggggacatggggccacgagctggctttggccacctg
gcccggagccatgacctgctcatctgcacagccgagctgctacagatggcactgaccagc
cccgaggaggaggagcacgtggagctgaacgccttctccctgcttgtggtggatgagtgt
caccacacgcacaaagacaccgtctacaacatcatcctgagccggtatctacagcacaaa
ctccagaggacacggcccctgccccaggtgctgggtctcacagcctccccaggcactggt
ggggcgtccacacttgatggggcgattgaccacatcctgcagctctgtgccaacctggac
acgtggcgcatcatgtcaccccagaactaccgcccccagctgcaggagcacagtcctcag
ccctgcaaacagtacaacctctgccacaggcgcagccaggacccatttggggacatgctg
aagaagctcatggagcgaatccacaaccgcctggatatgccggagttgagccgggacttc
gggacgcagacttacgagcagcaggtggtggagctgagccaggatgcggccgaggccggg
ctccagcagcgccgggtgtacgcgcttcacctgcggcgctacaacgatgcgctgctcatc
cacgacacggtccgtgctgtggacgcactggcctcgctgcgggagttctacgacagggag
cgcgccactaagacccaggtcctgcatgccgagcgctggctgctggcacagttcaatgac
tacaagaatgagctggccgacctggcgacacgtagcccggagaaccccaaactggagatg
ctagaacagatcctgcaagagcagttcggaagctccgacggctgccggggcatcctcttc
acccagacccgccagagcgctcactctctcctgctctggcttcagcagcagccgggccta
cagatactggacatcagggctgacctgctgattggggctgggaacagcagccagaacacc
catatgacccagagagaccagcaagaagtgatccggaagttccgggctggcatcctgaac
ctcctggtggctacaagcgtggcggaagaggggctagacatcccccagtgcaatgtggtg
gtgcgctatgggctcctgaccaacgagatctccatggtccaggcgaggggccgtgcccgg
gctggtcagagtgtgtactcgtttgtggcgacccaaggcagtcgggagctgcggcgggag
ctgaccaacgaggcgctggagactttgatggagcgggccgtggctgccgtgcagaagatg
gatgaggccgagtaccaggccaagatccgggatctgcagcgggcagccctggtcaagcgg
gccgcccaggcagcccagcgggagaatcagcggcagcagttcctggccgagcaggtgcag
cttctctgcatcaactgcatggtggccgtgggccacgggagtgacctgcggaaggtggag
ggcgcccatcacgtcaacgtgaaccccaacttctcgatctactacactgtctcccggggg
cctgtggtcatcgacagaaccttcaaggactggaagcctgggggtgccattcactgcagg
aactgtggggaggcctggggtctgcagatgatctacaagtcagtgaagctgccagcgctc
aaagttcgcagcatgcttctagagacaccccgagggagagtccaggccaagaagtggtcc
cgcgtgcccttcctcgtgcctgactttgactacctgcaacactgtacccagaacctgtct
gacttctccctggattga
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