KEGG   Panthera uncia (snow leopard): 125926803
Entry
125926803         CDS       T08832                                 
Name
(RefSeq) DNA ligase 3 isoform X1
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
puc  Panthera uncia (snow leopard)
Pathway
puc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:puc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    125926803
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:puc03400]
    125926803
Enzymes [BR:puc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     125926803
DNA repair and recombination proteins [BR:puc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     125926803
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C BRCT_2 RNA_ligase Synaptonemal_3 mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 125926803
NCBI-ProteinID: XP_049492575
LinkDB
Position
E1:complement(36991135..37012243)
AA seq 1007 aa
MPLDESAHFVCMTLTFKILFLPTLRALGRKELCLFGEQHRWPDRRQFGHWSETELFHGHG
LLQRRKAVLSSQKGGLRPRATRLVFLPGSHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKC
KEKIVKGVCRIGKVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEE
LEDNEKEQISQHIADLSSKATSTPKKKAVVQAKLTATGQVTSPVKGASFVTNTNPRKFSG
FAAKPNNSGEARSSPTPKASLSSSRCDPKHKDCLLREFRKLCAMVAENPSYNTKTQIIQD
FLRKGSAGDGFHGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNPDDMARDLEQG
DVSETIRVFFEQSKSFPPAAKSLLTIQEVDAFLLRLSKLTKEDEQQQALQDIASRCTAND
LKCIIRLIKHDLKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLRNEQEVEKEPGRR
RALSVQASLMTPVQPMLAEACKSIEQAMKKCPNGMFSEIKYDGERVQVHKNGDHFSYFSR
SLKPVLPHKVAHFKDYIPQAFPGGHSMILDSEVLLIDTKTGKPLPFGTLGVHKKAAFQDA
KVCLFVFDCIYFNDISLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTKASDLADMINR
VIREGLEGLVLKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMM
SIFLMGCYDPGSQKWCTVTKCSGGHDDATLARLQKELDMVKISKDPSKIPSWLKINKIYY
PDFIVPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATDLPKLKEL
YQLSKERADFTVAAGDEGSSTTRGSSGENEVTSRPASRASPKQPSTSAKKAGGRRSSPDS
RGGSKPTAKPPPVRVGEKRKAPDEPPGQAKVLLDIFTGVRLYLPPSTPDFSRLRRYFVAF
DGDLVQEFDMASATHVLGSRDENPEAQQVSPEWIWACIRKRRLVAPC
NT seq 3024 nt   +upstreamnt  +downstreamnt
atgccccttgatgaatctgcgcactttgtctgtatgactttgactttcaagatcctcttc
ctcccaaccctccgcgcactcgggcgaaaagaactctgcctcttcggagaacaacatcgc
tggcctgacagaagacagttcggccattggtcagaaacagagctgtttcatgggcacggc
ctcctccagagaagaaaggccgttctgtcatcccagaaaggcggtctaagaccacgtgcc
acccgccttgttttcttgccagggtcgcatgtgggactctgcagtggcccctgtgagatg
gccgagcaacggttctgtgtggactacgccaagcgtggcacggccggctgcaaaaagtgc
aaggaaaagatcgtgaagggcgtatgccggatcggcaaagtggtgcccaaccccttctca
gagtccgggggcgatatgaaagagtggtatcacattaaatgcatgttcgagaaactggag
cgggcccgggccaccacaaaaaaaattgaggacctcaccgagctggaaggctgggaagag
ctggaagataatgagaaggaacagataagccagcacattgcagatttgtcttccaaggca
acaagcacaccaaagaagaaagccgttgtccaggctaagctgacagccactggccaggtg
acgtctccagtgaaaggtgcctcatttgtcaccaataccaatcctcggaaattttctggt
tttgcagccaagcccaacaactctggggaagcccgctcaagccctacccctaaggcaagc
ctgtcctcaagcagatgtgaccctaagcacaaggattgtctgctacgtgagtttcggaag
ttgtgtgccatggtggctgaaaatcctagctacaacacgaagacccagatcatacaggac
ttccttcggaaaggttcagcaggagatggtttccacggtgacgtgtacctaacagtgaag
ctgctgctgccaggtgttattaagagtgtttacaacttgaacgataagcagattgtgaag
cttttcagccgcatttttaactgcaacccagatgatatggcacgagacctagagcagggt
gacgtgtcagagacgatcagagtcttctttgagcagagcaagtctttccctccagctgcc
aagagcctcctcaccatccaagaggtagatgcattcctccttcgcctctccaagctcacc
aaggaggatgagcaacagcaggccctgcaggacatcgcgtccaggtgtacagccaatgac
cttaagtgcatcatcagattgatcaaacatgacctgaagatgaactcaggtgcaaaacac
gtgttagatgcccttgaccccaatgcctatgaagccttcaaagcctcacgcaacctgcag
gacgtggtggagcgagtcctccgcaatgagcaggaggtggagaaggagccaggccggaga
cgagctctgagtgtccaggcttcactgatgacgccagtgcagcccatgctggccgaggcc
tgcaagtccatcgaacaagcgatgaagaagtgtcctaacggcatgttctctgagatcaag
tatgacggggagcgagtccaggtgcataagaacggagaccacttcagctacttcagccgc
agcctcaagcccgtcctgcctcacaaggtggctcactttaaggactatatcccccaggct
ttccctgggggccacagcatgatcttggactctgaggtgctcctgattgacactaagaca
ggcaaaccgttgccctttgggactcttggggtgcacaagaaagctgccttccaggatgct
aaagtctgcctgtttgtttttgattgtatctacttcaatgacatcagcttgatggacagg
cctctgtgtgagcggcggaagtttcttcatgataacatggttgaaattcccaaccggatc
atgttctcagaaatgaagcaagtcactaaagcttcggacttggccgacatgataaaccgg
gttatccgagaggggttggaagggctggtgctgaaggacgtgaagggtacatatgagcct
ggaaagcggcactggctgaaagtcaagaaagactatttgaacgagggggccatggctgac
acagctgacctggtggtccttggggccttctatgggcaagggagcaaaggtggcatgatg
tccatcttcctcatgggctgctatgacccaggcagccagaagtggtgcacggtcaccaag
tgttcgggaggccacgatgatgcaacgcttgcccgcctgcagaaggaactggacatggtg
aagatcagtaaggatcccagcaagatacccagctggctgaaaatcaacaagatctactac
ccggacttcatagttccagacccaaagaaagctgccgtgtgggagatcacaggggctgag
ttctccaaatctgaggctcacacggccgacggaatctccatccgattccctcgttgcacc
cggatccgtgatgataaggactggaaatctgccactgacctccccaaactcaaggaactg
taccagctgtccaaggagagggcagacttcactgtggcggccggagacgaagggagctcc
actactaggggcagcagcggagagaacgaggttacctcgcggcctgcctccagggcctcc
ccgaagcagccctccaccagtgccaagaaggcaggagggaggcggagcagccccgacagc
cgaggcggtagtaagcccacagcgaagcctccccctgtgagagtgggagagaagcggaag
gctcccgacgagcccccgggccaagcaaaggtgctgctggacatcttcactggggtgcgg
ctctacctgccaccctccacgccagacttcagccgtctcagacgctactttgtggcattc
gatggggacctggtgcaggaatttgacatggcttcggccacgcacgtgctggggagcagg
gacgagaaccctgaggcccagcaggtctccccggagtggatctgggcatgtatccggaaa
cggaggctggtagctccctgctag

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