Panthera uncia (snow leopard): 125926827
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Entry
125926827 CDS
T08832
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
puc
Panthera uncia (snow leopard)
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
puc03021
]
125926827
03036 Chromosome and associated proteins [BR:
puc03036
]
125926827
Transcription machinery [BR:
puc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
125926827
Chromosome and associated proteins [BR:
puc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
125926827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
125926827
NCBI-ProteinID:
XP_049492626
LinkDB
All DBs
Position
E1:41511954..41546414
Genome browser
AA seq
1725 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEENLDDQDEQGNLKGFINDD
DDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRRV
KKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMAPPEEEEEDDEESDI
DDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEYE
YEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQLR
SIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIKE
ALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKMQ
AYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNA
AKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFGL
TPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREPL
VRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAED
EGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQFL
YVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIRV
LGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFLL
NKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSEA
EFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYCE
FINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTMC
HMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAE
DANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTAY
RSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFC
QQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGM
TVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQQ
RTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHV
DVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDRK
KLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIF
PTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTS
QMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPSY
SYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQW
LQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagcgaggccgaggagtcagaggaagagtacaatgatgaaggc
gaagtggtgccccgagtcaccaagaaatttgtggaggaggaggatgacgatgaggaggag
gaggagaacctagatgatcaggatgagcaaggcaatctgaaaggctttatcaatgatgat
gacgatgaagatgaaggggaggaggatgagggtagtgactctggtgattcagaagatgat
gttggccacaagaagagaaaacgcacatcttttgacgaccgcctggaggatgatgatttt
gacctcattgaggagaatttgggtgtcaaagtcaaaagaggacaaaaataccgacgtgtc
aaaaaaatgtcagatgacgaggatgacgacgaggaggaatatggcaaagaggaacatgaa
aaagaggctattgccgaggaaatcttccaggatggggaaggggaagaagggcaggaggct
gtggaggcccccatggctcctccagaggaggaggaagaagatgatgaggaatcagacatc
gatgacttcattgtggatgatgacggacagcctctgaaaaaacctaagtggcggaaaaag
cttcctggatacacagatgcggccctacaggaagcccaggagatttttggtgtggacttt
gactatgatgagtttgagaaatacaatgagtatgacgaagaactggaggaagagtatgag
tatgaggatgatgaggccgagggtgagatccgagtgcgccccaagaagaccaccaagaaa
cgtgtgagccgcaggagcatctttgagatgtatgagcccagcgagctagaaagcagccac
ctcacagatcaggacaatgaaatccgagccactgacctgcctgagaggttccagctccgc
tccatcccagttaagggggctgaagatgacgaactggaagaggaagctgactggatctac
aggaatgcctttgccacaccaaccatttctcttcaggaaagctgtgattacctagaccga
gggcagccaaccagcagcttcagtcgtaaagggcccagcacaattcagaagattaaagaa
gccttgggtttcatgcgaaatcaacactttgaggtgccttttattgctttctaccgtaag
gagtatgtggagcctgagttgcacatcaatgacctatggagggtgtggcagtgggatgaa
aagtggacccaactgaggatccgcaaagagaacctaacacggctgtttgagaagatgcaa
gcttatcagtacgagcagatctctgctgatcctgacaaacccctggctgatggcatccgg
gctctagataccaccgacatggagaggcttaaggatgtccagtcaatggatgagctgaaa
gatgtctacaaccatttcttgctatattatggtcgtgatatccccaagatgcagaatgct
gccaaagccagccgcaagaagctgaagcgtgtgagggaagagggagatgaggaaggtgag
ggtgaagaggcagaagatgaggagcagaggggcccagagctcaagcaggcctcccgccga
gacatgtacaccatttgccagagtgctggcctagatggcctggccaaaaagtttggactg
actcctgaacaatttggggaaaacctgcgggacagctaccagcggcacgagacagagcag
ttccctgcagagcctttggagctggccaaggattatgtttgcagccagttccctacgcct
gaagctgtgctggaaggtgcccgctacatggtagccctgcagattgcccgagagcccctc
gtccgacaggtgctgaggcagaccttccaggagagagccaagctaaatataacccccacc
aagaaaggtagaaaggatgtggatgaggcccactatgcttactccttcaagtacttaaag
aacaagcctgttaaggaactgagagatgaccagttcctcaagatctgcttggctgaagat
gaagggctgctcaccattgacatcagcatagatatgaagggggtagaaggctacggcaac
gaccagacctatttcgaagagatcaaacagttttactaccgagatgagttcagccaccag
gtgcaggagtggaaccggcagcgcaccatggccattgagcgagccttgcagcagttcctc
tatgtgcagatggccaaagagctcaagaacaagctgctggccgaagccaaagaatatgtc
ataaaggcctgtagtcggaaactctacaactggttgagggtggcaccctaccggccagat
caacaggtagaggaagatgatgactttatggatgagaaccaagggaagggcatccgcgtc
ctaggcattgctttctcctctgccagagatcaccctgtgttctgcgccctggtcaacggt
gaaggagaagtgacagacttccttcgactgccccattttaccaaacggcgaactgcatgg
agagaggaagaacgggaaaagaaggctcaagacattgaaactctaaagaaatttcttctg
aataaaaagcctcatgtggtgacagttgcaggagaaaacagggacgcccagatgttaatt
gaagatgtgaagcgcattgtgcatgagctggaccagggccaacaactgtcctctattggg
gtggagctggttgacaatgagttggccattctctacatgaatagcaagaaatcggaggca
gagttccgggattatcctccggtgctgagacaggccgtctccctggcccggcgcatccag
gaccctctgattgaatttgcccaggtgtgcagctctgatgaagacatcctgtgtctcaag
tttcatcccttgcaagagcatgtggtgaaagaggagctgctcaatgccttatactgtgaa
tttatcaaccgagtcaatgaggttggggtcgatgtcaaccgtgccatcgcccacccatat
agccaggccttaatccagtacgtctgtggtctgggacctcgaaaagggacccatctcctg
aagatcctgaagcagaacaacaccaggctggagagtcggacccagctggtcaccatgtgc
cacatgggtcccaaagtcttcatgaattgtgctggcttcctcaagatcgacacggcctcc
ctgggggacagcaccgactcatacattgaagttcttgatggttcccgagtccaccctgag
acctatgagtgggccaggaagatggcagtggatgctctggaatatgatgaatcagctgag
gacgctaaccccgcaggagccctcgaagagatcttggaaaacccagagcgactcaaggat
ctggaccttgatgcctttgcagaagaactggagaggcagggctatggtgacaaacacatc
accctgtatgacatccgggcggagctgagctgtcggtataaggacctgcggacagcctac
cgctctcccaacacagaggaaatcttcaatatgttaaccaaagaaacaccagagaccttc
tacattggaaagctcatcatctgcaacgtcactggcattgcccacaggcgtccacagggt
gagagctatgaccaggcgatccgcaacgatgagacagggctgtggcagtgccccttctgt
cagcaagacaatttccctgaactaagcgaggtctggaaccactttgacagcggttcatgc
ccaggccaggccattggtgtcaaaacacggctagacaatggtgtcaccggcttcatcccc
accaagttcctcagtgacaaagtggtaaagcggcccgaggagcgagtgaaggtgggaatg
accgttcactgccgcatcatgaagattgacattgagaagttcagcgcagaccttacctgc
cgaacctcagacctcatggacaggaacaacgagtggaaactgcccaaggacacgtactat
gactttgacgctgaagcagcagaccacaagcaggaggaggacatgaaacggaagcagcag
cggaccacatacatcaagcgagtgatcgcacacccatccttccataatataaatttcaag
caagcagaaaagatgatggagaccatggaccagggtgatgtgatcatccgaccaagcagc
aagggtgagaatcacctgacagtgacctggaaggtcagtgatggcatctaccagcacgtg
gacgtgcgggaagagggcaaggaaaatgccttcagcctgggagccaccctgtggatcaat
agtgaggaatttgaagacttggatgagattgttgctcgctatgtccagcccatggcatcc
tttgcccgggaccttctgaatcacaagtattatcaggactgcagtggtggggatcgtaag
aaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcatcccttatttc
atctgtgcctgcaaggaactgcccggcaagttcctactgggataccagccccggggtaaa
cccaggatagaatacgtaacggtgactccagaaggattccggtaccggggccaaatcttc
cctactgtgaacggacttttccgatggtttaaggatcactaccaggatcctgtaccaggc
atcacccccagtagcagcagtaggacccggacacctgcttctatcaatgccaccccagcc
aatatcaatcttgcagatctgacacgggctgtgaatgccctgcctcagaacatgacctcg
cagatgttcagtgccatcgcagccgtgacaggccaaggacagaaccccaacgccacgcca
gcccagtgggcctcgagccagtatggctatggcggcagtggagggggcagcagcgcttac
cacgtgttcccaacgccagcccagcagccagtggccacaccactaatgacccccagctac
tcctacacaaccccaagccagcccatcaccacaccacagtaccaccagctacaggccagc
accaccccacagtctgcccaggcccagccccagccctcctccagctctcggcaacggcag
cagcagccaaagtccaacagccatgcagccatcgactgggggaagatggcagagcagtgg
ctacaggagaaggaagcggagcggcggaaacagaagcagaggctaacacctcggccctct
cccagccccatgatcgaaagcacccccatgtccattgctggcgatgccaccccactcctg
gacgagatggaccggtag
DBGET
integrated database retrieval system
