Panthera uncia (snow leopard): 125927424
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Entry
125927424 CDS
T08832
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG8
KO
K18734
protein SMG8
Organism
puc
Panthera uncia (snow leopard)
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
puc03019
]
125927424
Messenger RNA biogenesis [BR:
puc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
125927424
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Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
125927424
NCBI-ProteinID:
XP_049493739
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All DBs
Position
E1:32187834..32193765
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AA seq
991 aa
AA seq
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MAGPVSLRELLMGASSWTGSESPEGSPTEGGGSVAGGPEPPWREDEICVVGIFGKTALRL
NSEKFSLVNTVCDRQVFPLFRHQDPGDSGPGIRTEAGAVGEAGGAGDAGAGAGDSVRGGV
AAAEGNRTEPGSQDYSLLQAYYNQESKVLYLLLTSICDNSQLLRACRALQSGEAGGGLSL
PHAEAHEFWKHQEKLQCLSLLYLFSVCHILLLVHPTCSFDITYDRVFRALDGLRQKVLPL
LKTAIKDCPVGKDWKLNCRPCPPRLLFLFQLNGALKVEPPRSQDPTHPDKPKKHSPKRRL
QHALEDQIYRIFRKSRVLTNQSINCLFTVPANQAFVYIVPGSQEEDPVGMLLDQLRSHCT
VKDPESLLVPAPLSGPRRYQVMRQHSRQQLSFHIDSSSSSSSGQLVDFTLREFLWQHVEL
VLSKKGFDDSVGRNPQPSHFELPTYQKWISAASKLYEVAIDGKEEDLGSPTGELTSKILS
SIKVLEGFLDIDTKFSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQALRVYSQHAR
GPAFHKYAMQLHEDCYKFWSNGHQLCEERSLTDQHCVHKFHSLPKSGEKPEADRNPPVLY
HNSRARSTGACNCGRKQAPRDDPFDIKAANYDFYQLLEEKCCGKLDHINFPVFEPSTPDP
APAKNESSPAPPDADADKLKEKEPQTQGESTSLSLALSLGQSTDSLGTYPADPQAGGDNP
EVHGQGEVKTEKRPNLVDRQASTVEYLPGMLHSNCPKGLLPKFSSWSLVKLGPAKSYNFH
TGLDQQGFIPGTNYLMPWDIVIRTRAEDEGDLDTNSWPAPNKAIPGKRSAVVMGRGRRRD
DIARAFVGFEYEDSRGRRFMCSGPDKVMKVMGSGPKESALKALNSDMPLYILSSSQGRGL
KPHYAQLMRLFVVVPDAPLQIILMPQVQPGPPPCPVFYPEKQEITLPPDGLWVLRFPYAY
VTERGPCFPPKENVQLMSYKVLRGVLKAVTQ
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcctgtcagcttgcgagagcttctaatgggcgcttcatcctggaccggctct
gaaagtcccgaggggtcccctacagagggcggagggagcgtggctggtggacccgagcct
ccttggcgagaggatgagatctgcgtggtaggaatcttcggcaagacggctctgcgactg
aattccgagaagttctcacttgtgaatacggtttgcgaccgacaggtctttcccctcttt
cgccaccaagatcctggggactcagggcctggaatcaggaccgaggctggcgccgtcggg
gaggctggtggagccggagacgctggggctggggcgggggattcagttcggggaggtgta
gcggccgctgaagggaaccgaactgagccaggctcccaggactacagccttctgcaggcc
tattacaatcaagaaagcaaagttctttatcttcttctcacttccatctgtgacaattcc
cagcttctgcgggcttgtcgtgcccttcagagtggggaagctggaggtggcctctcttta
cctcatgcagaagcgcacgagttctggaagcatcaagagaagctgcagtgtctcagtctc
ctttaccttttctccgtttgtcacatcctgcttctggtccatcccacttgttcttttgac
atcacgtatgatcgagtattcagagcccttgatggactgagacagaaggtactgcccctc
ctcaaaacagccattaaggattgtccagttggcaaagactggaaactaaactgccgacct
tgccctcctagactccttttcctctttcaactcaatggagccctcaaagtggaaccccct
cggagccaagacccaactcatccagacaagcccaagaaacattctcccaaaaggagactg
cagcatgccctggaggaccagatctatagaatctttaggaagagtcgcgtcttaactaat
cagagtatcaattgcctctttactgtgcctgccaaccaagcttttgtgtacatagttccc
ggaagccaagaggaggacccagtaggcatgttgctggaccaacttaggagtcattgtact
gtgaaggacccagaatctttgctggtgcctgcacccctttctgggcccaggcgataccag
gtgatgaggcagcatagccgacagcagctttctttccacattgacagcagcagttccagt
tcttcagggcagctagtggatttcactctgcgggagtttctatggcagcatgtggaatta
gtcctaagcaagaaaggttttgatgacagtgtgggcaggaacccacagccttcccatttt
gaacttcccacttatcagaagtggatctcagcagcttcaaaactgtatgaagtagctata
gatgggaaagaggaggacctgggatctcccactggggagctaacatctaagattttaagc
agtattaaagtcttggaagggtttttggatattgacaccaaattctcagaaaaccggtgc
caaaaagctttacccatggcccatagtgcctatcagtcaaacttgcctcataactacaca
atgactgtccataagaatcagcttgcccaggctcttcgagtatacagtcaacatgctagg
ggtccagcctttcacaagtatgccatgcagttacatgaggactgctacaagttttggagc
aatggccatcagctctgtgaggaaaggagtttaactgatcaacactgtgtacataagttt
cactcattacctaaatcaggagaaaaaccagaggctgatagaaatcctcctgtgctgtat
cacaacagccgagctcgatctaccggtgcctgtaactgtggaaggaaacaagcacctcga
gatgatccctttgatatcaaggcagctaactatgacttttatcagcttctggaagaaaaa
tgttgtggaaaattggatcatatcaatttcccagtatttgaaccaagtactccagatcct
gctcctgccaaaaatgaatcttctcctgcccctccagatgcagatgctgataaacttaaa
gaaaaagaacctcaaacccaaggagagagcacaagcctgagtttagctttgagtttaggc
cagtccacagatagtttaggtacctatccagctgatccacaagcaggaggagataatcca
gaagttcatggtcaaggagaagtaaaaactgagaagagaccaaacttggttgatagacag
gcatccacagttgagtatctcccaggcatgctgcattcaaattgccctaaaggtctacta
cccaaattctccagctggtcattggttaaattaggccctgctaagtcttataactttcat
acaggtttagaccaacaaggcttcattccaggaacaaactatcttatgccttgggacatt
gtcatcaggactagagctgaagatgaaggagacttagacacaaattcttggcctgctcca
aataaagctattcctggaaagagaagtgcagtagtaatgggaagaggaagacggagagat
gacatagctcgagcatttgtgggctttgaatatgaagactctagaggtcggaggtttatg
tgttcaggacctgacaaagtaatgaaagtaatgggaagtgggccaaaggagtccgcttta
aaagccctgaatagtgatatgcccttatatattctgtcatcatctcagggtagagggcta
aaaccacattatgctcaacttatgaggctttttgttgtagttcctgatgctcctttgcag
ataatactaatgccccaggttcaaccaggcccaccaccatgtccagtattctacccagaa
aaacaagaaatcactcttccaccagatggcctctgggttttgagatttccttatgcatat
gtgactgagagaggaccttgtttccctcctaaggaaaacgtgcagttaatgagttacaag
gtgctccgtggagttcttaaagcagtaacacaataa
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