Panthera uncia (snow leopard): 125927877
Help
Entry
125927877 CDS
T08832
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc04612
Antigen processing and presentation
puc05145
Toxoplasmosis
puc05152
Tuberculosis
puc05164
Influenza A
puc05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
125927877
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125927877
09171 Infectious disease: bacterial
05152 Tuberculosis
125927877
09174 Infectious disease: parasitic
05145 Toxoplasmosis
125927877
09163 Immune disease
05340 Primary immunodeficiency
125927877
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
puc01001
]
125927877
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
puc04054
]
125927877
Enzymes [BR:
puc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
125927877
Protein kinases [BR:
puc01001
]
Serine/threonine kinases: Other
TAF1 family
125927877
Pattern recognition receptors [BR:
puc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125927877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_14
LRR_9
CARD
Motif
Other DBs
NCBI-GeneID:
125927877
NCBI-ProteinID:
XP_049494193
LinkDB
All DBs
Position
E3:3630608..3676799
Genome browser
AA seq
1204 aa
AA seq
DB search
MNHFQTILPRVRMLLAGHLPSQARALLDSMLERELLSREYHCALLREPDGEALARKISLT
LLEKGDPGLALLRWAWGTWQAPLAERDPDDEDRARSGQCAAMELGPLEGGYLELLNSNAD
PLHLYHLYDQMDPAREEMELCSEPDMDTINCEQFSRLLCDMEGDEETREAYANIAELDQY
VFQDSQLEGLSKGFFIEHIGLEEMIGESVETLEEKKSQKRSFPEELPMDSKHRKLAEPLA
VPMVTGTFLVGSVSDSSALPCLSPPAVFNKEPASSQRWLKETILMPVPPSSSLLSCLSLS
AGHIQIVPTLPQGLWQISGPGTGVSGMVIYQGEVPQASQELPSSSPAIHSLPKSPERPGS
TSPFAPSAADLPGMPEPALTSRADVTEEQMSPTRSPAAHEVSSQLPKWPERVEKFCSALR
DMYQAEPAGPEGILVEVELVRARLERSSSKSQERELATLDWAERQPARGGLAEVLLAGGD
PRRPRETQVIAVLGKAGQGKSRWAREASRAWARGQLPQYDFVFYLPCHCLDRGGDTYRLQ
DLLFSLGPRPLPVDDEVFSYVWRRPDRVLLILDASEGLEGQDGLLHSACGPVCTEPHSVR
GLLAGLFQRKLLRGCTLLLTARPRGRLAQSLSKADALFEVAGFSAEQAKTYLTCYLERAG
ATECRERALELLQGQPFLLSHCHSPTLCRAVGQLSEALLELGGETDLPSTLTGLYVGLLG
PAARDSPPGALAGLARLAWELGRRRQGTLLESQFPSAEARAWAVAKGLVQPAPGAAAVGL
AFSSFLLQCFLGAVWLALSSDIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLVFQPH
ADCLGALAGPAAATLKDRKQKVLTRYLKRLQPGTLRAGQLLELLHCTRETLDAGLWHHVV
QGLPARLSFVGTRLTTPHTYVLGSALEAAGRDFSLDLCSTGIDPPGLGSLVGLSCVTHFR
AALSDMVGLWESLQQRGEAKLLRAVEEKFTIEPFKAKSVKDVEDLGNLVQIQRTRSSSED
TAGELPAVRDLKKLEFALGPVSGPQAFPKLVRILEAFSSLQHLDLDSLSENKIGDEGVEQ
LSATFPRLKALETLNLSQNNITDVGACKLAEALPSLAASLLRLSVYNNCICDMGAESLAH
VLPDMGSLRVLDVQYNKFTAAGAQQLAASLRKCPHVETLAMWTPTIPFGVHEHLQQLDSR
ISLK
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacttccagaccatcctgcctcgggtccggatgctgctggccggccatctgccg
agccaggcccgggccctcctggacagcatgttggagagggagctcctctccagggagtac
cactgcgctctgctccgcgagcctgacggcgaggccctggccaggaagatctccttgacc
ctgctggagaaaggagacccaggcttggccctcttgaggtgggcatggggtacgtggcag
gccccgctggccgagagggaccccgacgacgaggaccgtgcccgcagtgggcagtgtgcc
gccatggagttggggcctctagaaggcggctacctggagcttctcaacagcaatgctgac
cccctgcatctctaccacctctatgaccagatggacccggctagagaagagatggagctc
tgctcagaacccgacatggacaccatcaactgcgagcagttcagcagactgttgtgtgac
atggaaggtgatgaagagaccagggaggcttatgccaatatcgcggaactggaccagtac
gtgttccaggactcacaactggagggtctgagcaaaggctttttcatcgagcatatagga
ttggaagaaatgatcggcgagagtgtggagacgctggaggaaaagaaaagtcagaaaaga
tccttcccagaggagctgcccatggactcgaagcacaggaagctggctgagcccctcgct
gtgcccatggtgactggcactttcctggtggggtccgtgagtgactcctcagctctgccc
tgcctgtcaccccctgctgtgttcaacaaggagccggcatccagccagaggtggctgaag
gagaccatcctgatgcctgtgcccccttcaagttccttgctgagctgcctgagcctttct
gctggacacatccagatagtccccactctgccccaggggctctggcaaatctcagggcct
gggacaggggtatctggtatggtcatctatcaaggtgaggtgccccaggccagccaggag
cttccttccagcagccccgccatacacagcctccccaaatccccagaacggcccggctcc
accagcccctttgccccgtctgcggctgaccttcccggaatgccggaaccagctctgacc
tcccgtgcagatgtgacagaggagcagatgtcccctacccgatccccggcagctcacgag
gtctccagccagctcccgaaatggcctgagcgggtggagaagttctgcagcgcccttcgg
gacatgtaccaggctgagcccgcaggcccggaaggcatcctggtggaggtggaactggtg
agggcgcggctggaaaggagcagcagcaaaagccaggagagggagctggccaccctggac
tgggcagagcggcagccggcccgcgggggcctggccgaggtgctgctggcggggggtgac
ccccggcggccgcgggagacgcaggtgatcgctgtgctgggtaaagcggggcaggggaag
agtcgctgggcccgggaagcaagccgggcctgggcccgcggccagctgccccagtacgac
ttcgtcttctacctcccctgccactgtttggaccgtgggggggacacctaccgcctgcag
gatctgctgttctccctgggcccccggcctctgccggtggacgatgaggtcttcagctac
gtctggaggaggcccgaccgggttctgctcatcctggatgcctccgagggcctcgaaggc
caagacggcctcctgcacagcgcgtgtggacccgtgtgcacagagccccactccgtccgg
ggactgctggcgggcctcttccagcgtaagctgctgcggggctgcaccctgctgctcacg
gcccggccccggggccgcctggcccagagcctgagcaaggccgacgctctgttcgaggtg
gccggcttctcagccgagcaggccaagacctacctgacgtgctacttggagcgcgcaggg
gcgaccgagtgccgagagagagccctggagctcctccagggtcagcctttcctcctcagc
cactgccatagccccactttgtgccgggccgtgggccagctgtccgaggccctcctggag
ctggggggtgagacggatctgccctccacgctcacgggactctacgtgggcctgctcggc
cctgccgcccgcgacagccccccgggggccctggcaggactggccaggctggcctgggag
ctgggccgcagacgccagggcaccttgctggagagccagttcccgtcggcggaggcgagg
gcctgggccgtggccaagggcttggtgcagcccgccccaggggccgcggcggtggggctg
gccttctccagcttccttctgcagtgcttcctgggggccgtgtggctggccctgagcagc
gacatcaaggacaaggagctgccacagtacttggcgttgaccccaaggaagaagaggccc
tacgacaactggctggagggcgtgccgcgcttcctggcggggctggttttccagccgcat
gccgactgcctcggggccctggcggggcctgcggcggccaccctgaaggacaggaagcag
aaagtgctcaccaggtacctgaagcggctgcagccggggacgctgcgggccggacagctg
ctggagctgctgcactgcacccgtgagactttggacgctgggctctggcaccacgtggtg
caggggctccccgcccgcctctccttcgtgggcacccggctcacgactccccacacctat
gtcctgggcagtgccttggaggcggcgggccgagacttctccctggacctctgcagcact
ggcattgacccccctggactggggagcctcgtgggactcagctgcgtcacccatttcagg
gctgcgctgagtgacatggtggggctatgggagtctctacagcagcgtggggaggccaag
ctgctccgggcggtggaggagaagttcaccatcgagcctttcaaggccaagtccgtgaag
gatgtggaagatctgggcaacctcgtgcagatccagaggacaagaagttcttcagaagat
acggctggagaactccctgcggtccgggatttaaagaagctggagttcgcgctgggcccc
gtctcaggcccccaggcttttcccaagctggtgaggatcctcgaggccttttcctccctt
cagcatctggacctggactcgctgagcgagaacaagattggcgatgagggtgtcgagcag
ctgtcggccaccttccctcggctcaaggccctggagaccctcaacttgtcccagaacaac
atcaccgatgtgggcgcctgcaagctcgctgaggccctgccctcgctggctgcatccctc
ctcaggctcagtgtatacaataactgcatctgtgacatgggagccgaaagcctggcgcac
gtgcttccagacatggggtccctccgggtgctggatgtccagtataacaagttcacagcc
gccggggcccagcagctggccgccagcctgagaaagtgccctcacgtggagacgctggcg
atgtggacgcccaccatcccgtttggcgtccacgagcacctacagcagctagattcgcgg
atcagcctgaagtga
DBGET
integrated database retrieval system
