Panthera uncia (snow leopard): 125928012
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Entry
125928012 CDS
T08832
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin 2/2L
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc05014
Amyotrophic lateral sclerosis
puc05017
Spinocerebellar ataxia
puc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125928012
05017 Spinocerebellar ataxia
125928012
05022 Pathways of neurodegeneration - multiple diseases
125928012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
puc03019
]
125928012
Messenger RNA biogenesis [BR:
puc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125928012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
125928012
NCBI-ProteinID:
XP_049494454
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Position
E3:complement(16646927..16659216)
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AA seq
1105 aa
AA seq
DB search
MLKPQPPQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLASTSAPPGPPAAATPCLG
PAAAAGSGLRRGAEGILAPQPPPPQQHQERPGAAAIGSARGQSTGKGPPQSPVFEGVYSN
SRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPCREDIV
DTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDD
YDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLA
REIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLASREGKYIPLPQRVREGP
RGGVRCSSSRGGRPGLSSLPPRGPHHLDNSSPSPGSETRGINGGPSRMSPKAQRPLRGGA
KTLSSPSSRPSGEASVPPPPAAFPFLPVGRMYPPRSPKSAAPAPISASCPEPPIGSAVPT
SSASIPVTSSVVDPGVGSISPASPKISLAPTDVKELPAKEPGRTLESQELSRIAGKVPGL
QNEQKRFQLEELRKFGAQFKLQSSSSPETSLDPFPPRILKEEAKGKEKEVDGLLTSEPMG
SPVSSKTESVSDKEDKAPLPPAGATEGPEQPPPPCPSQTGSPPVGLIKGDDKDEGPVAEQ
VKKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISY
IPQIHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAA
AGPPLVAATPYSSYIPYTPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQA
IVSSSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSP
VQHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAHQQ
LPHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPA
LSASTPSPYPYIGHPQGEQPGQAPGFPGGADDRILCRVGRSHSRRRQGLAPGSVLCFPPS
SLSCDPAAPLPTASPALSDPDCLLT
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagacctcccagccccagcagccgccccccacgcaa
caggccgtggcccgccggcctcccgggggcaccagccctcccaacggcggcctcccgggg
cccctggcctccacctcggctcctccagggcctcccgcggccgctactccctgcttgggg
cctgcagcagccgccgggagcgggctccgccggggagccgagggcattttggcgccgcag
ccgccgccgccgcagcaacatcaggaaaggccaggggcagcggctatcggcagcgccagg
ggacaaagcacaggaaagggccccccacagtcaccggtgttcgagggtgtttacagcaat
tccagaatgctgcattttcttacagctgttgtgggctccacttgtgatgtgaaggtgaag
aatggtaccacgtatgaaggtatcttcaagactctgagctcaaagtttgaactagccgtg
gatgctgtacaccggaaagcatctgagccagcaggtggcccttgtcgggaagacattgtg
gataccatggtgtttaagccaagtgatgtcatgcttgtccacttccgaaatgttgacttc
aattatgctactaaagacaagtttacggattcagccattgccatgaactcaaaagtgaat
ggggagcacaaagagaaggtgcttcagcgctgggaagggggtgacagcaacagtgatgac
tatgacctcgagtctgacatgtccaacggatgggaccccaatgaaatgttcaagttcaac
gaggagaactatggtgtgaagaccacctatgatagcagtctttcttcttacacggtgccc
ttggagaaggacaactcggaagagtttcgtcagcgggagctgcgtgcagcccaattggct
cgagagattgaatcaagcccccagtaccgcctgcggatcgcaatggagaacgatgatggg
cgcactgaggaagagaagcacagtgcagtccaacggcagggttcagggcgggagagcccc
agcttggcatccagggagggaaagtatatccctctaccccaacgagttcgggaaggtccc
cggggaggagttcgatgcagtagttcccggggtggccgccctggccttagctctttgcca
cctcgtggccctcaccatcttgacaatagcagccccagcccaggttctgagacacgtggt
atcaatggaggcccttcccgcatgtcccctaaggcacagcggcctctgagaggtggtgcc
aagactctgtcttcacccagcagtaggccctctggagaagcttctgttccacctcctcct
gcagctttcccttttcttccagtgggccggatgtatcccccacgttctcccaagtcggct
gcccctgccccaatctcggcttcctgtcctgagccccccattggctcagcagtaccaacc
tcttcagcttccatccctgtgacatcatcagttgtggatcctggagtaggctccatttcc
ccagcttctccaaagatctcattggcccccacagatgtaaaagaacttccagccaaggaa
cctgggagaactctggaatcccaggagctgtcccggatagctgggaaagtccctggcctt
cagaatgaacagaaacgctttcaactggaagaattgagaaagtttggggcccagtttaag
ctgcagtccagtagctcccctgagaccagcctggatccttttcctccccggatcttaaag
gaggaggccaaagggaaagagaaggaggttgatggtctgttgacttcagagccaatgggg
tcgccagtctcctccaagacggagtccgtatcggataaggaggacaaagcacccctgccg
ccagcaggagccaccgaggggccagagcagcccccgccaccttgcccaagccagactggc
agccccccggtgggcctcatcaagggagacgacaaggatgagggccctgttgccgaacaa
gtgaagaagtccacgctgaaccccaatgccaaggaatttaatcccacaaagcctctgctg
tctgtgaataaatccaccagtaccccgacttctccggggccccggactcactcaactcct
tccatcccggtgctcacagcaggccagagtgggctctatagcccccagtacatttcctac
atacctcagatccacatgggaccagctgttcaggcacctcagatgtatccatatcctgta
tccaattccgtgcctggacagcagggcaagtaccggggagcaaaaggctccctgcccccg
cagcgctcggaccaacaccagccagcctcagcccctccgatgatgcaggccgccgccgcc
gccggcccccctcttgtggctgccacaccgtactcttcctacatcccctacaccccgcag
cagttcccgggccagcctgccatgatgcagccaatggcccactacccctcgcagccggtg
ttcgcccccatgcttcagagcaacccacgcatgctgacgtcggggagccatccccaggcc
attgtgtcgtcctccactcctcagtacccttctgcagagcagcccaccccccaagccctg
tatgccaccgttcaccagtcctatccacaccatgctacgcagctccatgcccaccagccg
cagccggccaccacgcctactgggagccagccgcagtcccagcatgcggcccccagtccc
gtccagcaccaggcggggcaggccccacacctgggcagtggacagccacagcagaatctg
taccacccaggggccctgacaggcacgccgccttctctgccaccgggaccttctgcccag
tcccctcagagcagcttcccccagccagccgctgtgtatgccatccatgcccaccagcag
ctgccccacggcttcaccaacatggcccatgttacccaggcccatgtccaaactggaatc
acagcagccccgccccctcaccctggggctccccacccgccccaggtgatgctgctgcac
ccaccccagagccatgggggccccccccaaggcgcggtgccccagagtggggtgcctgca
ctctcagcttccacaccctcaccctacccctacatcggacacccccaaggtgagcagcct
ggccaggcgcctggatttccaggaggagccgatgacaggattctatgtagggtgggcaga
agccacagtcgccgccgccaggggcttgctcctggctctgtcctttgcttccctccgtcc
tcgctcagttgtgatccagcagcccccctccccactgcctccccagctctcagtgacccc
gactgtctcctgacttag
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