Panthera uncia (snow leopard): 125928280
Help
Entry
125928280 CDS
T08832
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc03430
Mismatch repair
puc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
125928280
03460 Fanconi anemia pathway
125928280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
puc03400
]
125928280
DNA repair and recombination proteins [BR:
puc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
125928280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
UfSP_MPN_N
Motif
Other DBs
NCBI-GeneID:
125928280
NCBI-ProteinID:
XP_049494866
LinkDB
All DBs
Position
E3:complement(29189201..29216639)
Genome browser
AA seq
901 aa
AA seq
DB search
MNMLDTLTINRDESFPAVKTRMKIHKCMLALFLVTGVFSTELAKAIKPIDRRSVHQICSG
QVVLSLSTAVKELVENSVDAGATNIDLRLKDYGVDLIEVSDNGCGVEEENFEGLTLKHHT
SKIQDFGDLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTRLAFDHNGKIVQKTPH
PRPRGTTVSVQQLFYTLPVRHKEFQRNIKKEYARMVQVLQAYCIIAAGIRVSCSNQVGQG
KRQPVVCTSGSSSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEEYGLSHGDALQTLFRI
SGFISHCAHGVGRSSTDRQFFFINRRPCDPAKVSRLVNEVYHMYNRHQYPFVVLNISVDS
ECVDVNVTPDKRQILLQEEKLLLAVLKTSLIGMFDGDLNKLNVSQQPLLGIEGNLIKKHS
AEMEKPVPEKQDDPASLRTGGEAKRAVTISRLRETFSLRHTTETKSQGPNTTEPRRISPR
QKRRVQCSGAPDSPCFQKCASGTGSSGPGGEAMRVRGGPCDRRDGVEMEQDSGHSRTSAG
PREGPGTPATGGQSGGACAANSPEDRFSQGNEEASEKLPELDRRSADTERGSDHEDGGRK
HRVSPPPVDASSPSTRRFKKDSIPLNPDLPQGLVTAQNTSASQVDVAVKISKKVVPLAFS
MRSLAARIKQLRHQERPQEGEQNYRKFRAKICPGENQAAEDELRKEISKTMFADMEIIGQ
FNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHMALQGQRLIAPQTLNLTAVNEAILIE
NLEIFRKNGFDFVIDEGAPVTERAKLISLPTSKNWTFGPQDIDELIFMLSDSPGVMCRPS
RVRQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHIANLDFISQ
K
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgttagatacattgactattaacagagatgaatcatttcccgcagttaaaacc
aggatgaaaatacataaatgcatgcttgctttgtttcttgtaactggtgtctttagtaca
gaacttgctaaggccatcaagcctatcgatcggaggtcagtccatcagatttgttctgga
caagtagtactgagtctaagtactgctgtgaaggagttggtagaaaatagtgtggatgcc
ggtgccactaatattgatctaaggctcaaagactatggggtggatctcattgaagtttca
gacaatggatgtggggtagaagaagaaaactttgaaggcttaactctgaaacatcacact
tctaagattcaagactttggtgacctaactcaggttgaaacttttggctttcggggggaa
gctctgagttcactttgtgcactgagcgatgtgactatttctacctgccacgcatccgcg
aaggtcgggactcggcttgcgtttgatcacaatgggaagatcgtccagaaaaccccccac
ccacgacccagagggacaacggtcagtgtgcagcagctgttttatacactccctgtgcgc
cataaggagtttcaaaggaatattaaaaaggagtatgccagaatggtccaggtcttacaa
gcatactgtatcattgcagcaggcatccgtgtaagttgcagcaatcaggttggacaagga
aaacgccagcctgtggtttgcacaagcggaagctccagcataaaggaaaatattggatct
gtgtttgggcagaaacagctgcaaagcctcattccttttgttcagctgccccctagtgac
tctgtgtgtgaagagtacgggctgagccacggtgatgctttgcagactctgtttcgcatc
tctggtttcatttctcactgtgctcatggtgttggaagaagctcaacagacagacagttt
ttctttatcaatcggcggccttgtgacccggcaaaggtttccagacttgtgaatgaggtc
tatcatatgtataatcgccatcagtatccatttgttgttcttaacatttctgttgattca
gaatgtgttgacgtcaatgttactcccgataaaaggcagatcttactgcaagaggagaag
cttttgttggcagttttaaaaacatctttgataggaatgtttgatggtgatctcaacaaa
cttaatgtcagtcagcagccgttgttgggtattgaaggtaacttaataaaaaagcattcg
gcagaaatggagaagcccgtgccagaaaaacaggatgatcctgcttcgttaaggactgga
ggagaagcgaagagggcagtgaccatttccagactgagagagaccttttctcttcggcac
acgacagagaccaagtctcagggcccgaacaccaccgaaccgagacggatttctccaaga
cagaagagacgcgtccagtgttctggagctccagactccccgtgtttccagaagtgcgcc
tcgggcacaggctcgtccggccctggcggggaggcgatgcgtgtgcgcgggggcccctgt
gaccgcagggacggagtggagatggagcaggactcggggcacagccgcacttcggccggc
ccgcgggaagggcccggcaccccagcaacgggcggtcagtccggtggcgcctgtgcagca
aactcccctgaggacaggttttcacagggaaacgaggaagcttctgagaagttgcctgaa
cttgaccgtcgctctgcagacacggagcgcggttccgatcacgaggacggtggacgtaaa
catagggtctcgcctccgcccgtagatgcatcctccccaagcacacggcgtttcaaaaaa
gacagcattcctttgaatcctgacctccctcaagggttggtgactgcgcagaacacatca
gcgtctcaggtggacgtggctgttaaaatcagtaagaaagtagtgcccctggccttttcc
atgcggtctttagcggcacgaataaagcagttacgtcaccaagaaaggccacaagaaggc
gaacagaattacaggaagttcagggcaaagatctgccccggagaaaaccaagccgccgaa
gatgaactgagaaaggagataagtaaaacgatgtttgcagacatggagatcattggtcag
tttaacttgggatttataatcaccaaactcaatgcagatatcttcatagtggaccagcat
gccacggatgagaagtacaactttgagatgctccagcagcacatggccctccagggtcaa
aggcttatcgcaccccagactctcaacttaactgctgtcaatgaagctatcctaatagaa
aatctggaaatattcagaaagaatggcttcgattttgttatcgacgaaggggctccagtc
actgaaagggcgaagttgatttccttgccaaccagtaaaaactggacctttggacctcag
gacatcgatgaactgatcttcatgctcagtgacagccctggggtcatgtgtcggccttcc
cgcgtcagacagatgtttgcctccagagcctgtcgaaagtctgtgatgattggaaccgcc
ctaaacacaagtgagatgaagaaactgatcacccacatgggtgagatggaccatccctgg
aactgtccccacggaaggccgaccatgagacacattgccaacctggatttcatttctcaa
aagtga
DBGET
integrated database retrieval system
