Panthera uncia (snow leopard): 125928540
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Entry
125928540 CDS
T08832
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc04120
Ubiquitin mediated proteolysis
puc04137
Mitophagy - animal
puc04144
Endocytosis
puc04340
Hedgehog signaling pathway
puc04350
TGF-beta signaling pathway
puc04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125928540
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125928540
04350 TGF-beta signaling pathway
125928540
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125928540
04137 Mitophagy - animal
125928540
09144 Cellular community - eukaryotes
04520 Adherens junction
125928540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
puc04131
]
125928540
04121 Ubiquitin system [BR:
puc04121
]
125928540
03029 Mitochondrial biogenesis [BR:
puc03029
]
125928540
Enzymes [BR:
puc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125928540
Membrane trafficking [BR:
puc04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
125928540
Autophagy
Mitophagy
Other mitophagy associated proteins
125928540
Ubiquitin system [BR:
puc04121
]
Ubiquitin ligases (E3)
HECT type E3
125928540
Mitochondrial biogenesis [BR:
puc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
125928540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
125928540
NCBI-ProteinID:
XP_049495213
LinkDB
All DBs
Position
E3:28159712..28270318
Genome browser
AA seq
731 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCARLLSNAISRLKDTGYQRLDLCK
LTPSDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGTVYEDSGPGRPLSCFMEEPA
PYTDSTGAAAGGGDCRFVESPSQDQRLQAQRLRNPEVRGSLQTPQNRPHGHQSPELPEGY
EQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVD
HNNRTTQFTDPRLHHIMNHQCQLKEPSQPLPLPSEGSVEDEELPAQRYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
QHELKPNGRNVPVTEDNKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
ELELIIGGLDKIDVSDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
VPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccccgggacgcgcaggaacggctccagcatcaagatccgtctgacagtgtta
tgtgccaagaaccttgcaaagaaagatttcttcagactccccgacccctttgcaaagatt
gtggtggatggatctgggcagtgccactcaacggacactgtgaaaaacacattggaccca
aaatggaaccagcactatgatctatatgttgggaaaactgattccataaccatcagcgtg
tggaaccacaagaagattcacaagaagcagggagctggctttctgggctgtgcgcggctg
ctttccaacgccatcagcagattaaaagatactggataccagcgtttggatctatgcaaa
ctaactccctcagatactgatgcagttcgtggccaaatagtggtcagtttacagacacga
gacagaataggcactggagggtctgtggtagactgccgaggactgttagagaatgaagga
actgtgtatgaagactcaggacctggaaggcctctcagctgcttcatggaggagccagcc
ccttacacagacagtactggtgctgcggctgggggaggggactgcaggtttgtggaatcc
ccaagtcaagatcaaaggctccaggcacagcgacttcgaaatcctgaggtccgggggtca
ctacagacacctcagaaccgtccccacggccaccagtcgccagaactgcccgaaggctat
gagcaaaggacaacggtgcaggggcaagtttactttttgcacacacagactggagttagc
acgtggcacgaccccaggataccaagagaccttaacagcgtgaactgtgatgaactcgga
ccactgccaccaggctgggaagtcagaagtacagtctcggggagaatatattttgtagat
cataataaccgaacaacccagtttacagacccaaggttacatcacatcatgaatcaccag
tgccaactaaaggagcccagccagccgctgccattgcccagcgagggctcggtggaggat
gaggagcttcccgcccagagatacgagagggatttagtccagaagctgaaggtcctcaga
cacgagctttcgcttcagcaaccccaagctggtcattgccgcatcgaagtgtccagagaa
gaaatatttgaggagtcttatcgccagatcatgaagatgcggccaaaggatctgaagaag
cgactgatggtcaagttccggggagaagaaggtttggattatggcggagtggccagggag
tggctctatttattgtgccatgaaatgttgaatccgtattatggactcttccagtattct
acggacaacatttacatgttgcaaatcaacccggattcttcgatcaaccccgaccatctg
tcttatttccattttgtgggtcggatcatgggtctcgccgtattccacggacactacata
aacgggggcttcacggttcccttctataagcagctactggggaaacccatccagctctct
gatttggagtcggtggacccagaactccataagagcttagtgtggattctagagaacgat
atcacccctgtgctagaccacactttctgtgtggaacacaatgctttcgggaggattctt
cagcatgaactgaaacccaatggtcgcaacgttcctgtcacagaggacaacaagaaagaa
tatgtccggttgtatgtaaattggaggttcatgcgggggattgaagcccagttcttggct
cttcagaaggggtttaatgaactcattcctcaacacttactgaagccgtttgaccagaag
gaactagagctgatcataggcggcctggataagatcgacgtgagcgactggaagtccaac
actcggctgaagcactgtgtggccgacagcaacatcgtccgctggttctggcaggccgtg
gagaccttcgatgaggagaggagggccaggctgctgcagttcgtgaccgggtccactcgg
gtccctctccaaggcttcaaggctttgcaaggttctacaggcgcggcagggccccggctc
ttcaccatccacctgattgacgccaacacagacaaccttccgaaggcccacacctgcttt
aatcggattgacattccaccttacgagtcgtacgagaagctctacgagaagcttttgacg
gccgtggaggagacttgcgggtttgccgtggagtga
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