KEGG   Panthera uncia (snow leopard): 125928760
Entry
125928760         CDS       T08832                                 
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
puc  Panthera uncia (snow leopard)
Pathway
puc03082  ATP-dependent chromatin remodeling
puc04714  Thermogenesis
puc05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:puc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125928760
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    125928760
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    125928760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:puc03021]
    125928760
   03036 Chromosome and associated proteins [BR:puc03036]
    125928760
Transcription machinery [BR:puc03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     125928760
Chromosome and associated proteins [BR:puc03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    125928760
   PBAF complex
    125928760
   GBAF(ncBAF) complex
    125928760
SSDB
Motif
Pfam: SWIRM-assoc_2 SWIRM-assoc_3 SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 HEAT_GCN1 Chromo DUF919 BRCT_2
Other DBs
NCBI-GeneID: 125928760
NCBI-ProteinID: XP_049495388
LinkDB
Position
A2:complement(15980116..16153713)
AA seq 1335 aa
MNSKKPKRQRGRAVQVAPTAGARASEAGKSWWCGWGHEGEVKCVPLEQLRVVVPDGCLQR
LRRLDVEGLRAREGRRRFPPFPWVPRPALDTLNGLPPRNFSPGLFSPAVAGDDRSSLHWL
TGRRKELGCSKTRRGPGWVAEEVRSLPRLAEEAGARVRLRPAWPRCCACVRACPLRLRTG
SPEGAGPALRAGRGLTGRGREVAVAAARARARVRTGNAARAGPGGGTTDGDDGRGGGRRR
GAAAGAAGAGGAAAAAGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLGKHYKKYVHAD
APTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCHILGAAYKYKN
EQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLTRPSIYLIPDIDLKLANKLKDIIKR
HQGTFTDEKSKASHHIYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSYDTWVHSNDVD
AEVEDPPIPEKPWKVHARWILDTDVFNEWMNEEDYEVDENRKPVSFRQRISTKNEEPVRS
PERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKEEDEQEDLTKD
MEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGGKEDEDPSKGD
QSRSLDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAY
RNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGP
PPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFGLRTDIYSKKT
LAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPY
LENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVP
LELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMETDTDVQQP
EKAENKGENETDEGDKAQDGENEKHSEKEQDSEVSEDTKSEEKETEENKELTDTCKERES
DLGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIK
LRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQQQHGQNPQQA
HQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGPGSMIPGQPMP
GRMIPTVAANIHPPGSGPAPPGMPPMPGNILGPRVPLTAPNGMYAPPPQQPPPPPPPTDG
VPPPPAPGPPASAAP
NT seq 4008 nt   +upstreamnt  +downstreamnt
atgaattcgaaaaagcctaagcgacaaaggggaagagctgtccaggtggcgccaacagct
ggtgctagggcctccgaggcaggaaagagctggtggtgcggctggggccacgagggggaa
gtaaagtgtgtgccgctggagcagctccgggtggtggtcccagatggatgtttacaaagg
ctacggcggcttgatgtagaaggtctgagggcaagagaaggcagacgcagattcccaccc
ttcccgtgggttcctcggccagcactcgacaccctaaacgggcttccccctcggaacttc
tcgccaggtcttttctccccggctgtagcaggggatgacagaagctccctgcactggttg
acgggacgcaggaaggaacttggatgcagcaagacacgcagaggcccaggctgggtagcg
gaggaggtacgcagcctgcctcgactggcggaagaggcgggcgcaagagttcgtctgaga
cctgcctggccccgatgctgcgcatgcgtgcgcgcgtgcccgcttcggttacggaccggg
tccccagaaggggcggggccggccctccgcgccggaagggggttgactgggcggggccgg
gaggtggcggtggcggctgcgcgcgcgcgcgcgcgggtgcgaacggggaacgctgcgagg
gccgggccgggcggtgggacgacggacggcgacgatggccgcggcggcgggcggcggcgg
ggggcggcggcgggcgccgcgggcgcgggaggcgcggcggcggctgcgggcctggccgtt
tatcggcggaaggacggtggcccggccagcaagttttgggaaagcccggagacggtgtcc
cagctggattcggtgcgggtctggctgggcaagcactacaagaagtatgttcacgcagat
gctcctaccaacaaaactctggctgggctagtggtacagcttctccaattccaggaagat
gcctttgggaagcatgtcaccaacccggccttcaccaaacttccagcaaaatgtttcatg
gatttcaaagctggaggcaccttgtgtcacattcttggggctgcttacaagtataaaaat
gaacagggatggcgtaggtttgatctacagaatccatctcgaatggatcgtaacgttgaa
atgtttatgaatattgaaaaaacattggtgcagagcaattgtctgaccagacccagcatc
tacctcattccagacattgatctgaagttggctaacaaattgaaagatatcatcaaacga
catcaggggacatttactgatgagaagtcaaaggcttcccaccacatttatccatatcct
tcctctcaagaggatgaagaatggttgagaccggtgatgagaaaagataagcaggtgtta
gtgcactgggggttttacccagacagctatgatacttgggtccatagtaatgatgttgat
gcagaagttgaagatcccccaattccggaaaagccatggaaggttcatgcaagatggatt
ttggatactgatgttttcaatgaatggatgaatgaggaggattatgaggtggatgagaac
aggaagcctgtgagttttcgtcagcgaatttcaacaaagaatgaagagccagtcagaagt
ccagagagaagagataggaaagcatcagctaatgctcgaaagaggaaacattcgccttcc
cctccacctccaacacccacagaatcccggaagaaaagtggaaagaaaggccaagctagt
ctttatgggaagcgcagaagtcagaaagaggaagatgagcaagaagatcttaccaaggac
atggaagacccaacaccagtacccaacatagaggaagtggtacttccaaaaaatgtgaac
ccaaagaaagatagtgaaaatacacctgttaaaggaggaactgtggcagatctagatgag
caggatgaagaaacagtcacaacaggaggaaaggaagacgaagatcctagcaaaggtgat
cagagtcgttcacttgacccaggagaagataatgtgacagagcagaccaatcacattatt
attcctagttatgcatcatggtttgattataactgtattcacgtgattgaacggcgtgct
cttcctgaatttttcaatgggaaaaacaaatccaagactccagaaatatacttggcatat
cgaaattttatgattgacacatatcgcctaaacccccaagaatatttaaccagcactgct
tgtcggcgaaacttgactggagatgtgtgtgctgtgatgagggttcatgcctttttagag
cagtgggggcttgtcaattatcaagtggatccagaaagtcgacccatggcaatgggacct
cctcctactcctcatttcaatgtattagctgataccccttctgggcttgtgcctctacat
cttcgatcacctcaggtccctgctgctcagcagatgttaaattttcctgagaagaacaag
gaaaaaccaattgatttgcagaactttggtcttcgtactgacatttactccaagaaaacc
ttagcaaagagtaaaggtgctagtgctggaagagaatggactgaacaggagacccttctg
ctcctggaggccctggagatgtacaaggatgattggaacaaagtgtcagagcatgtcgga
agtcgtactcaggatgaatgcatcctccactttctgaggcttcctattgaggacccgtac
cttgagaattcggatgcctccctggggcccctagcttaccagcctgtccctttcagtcag
tcaggaaacccagtcatgagcactgttgcttttttggcatccgtggtggaccctcgtgtg
gcatctgctgcagcaaaagcagctttggaggagttttctcgggtccgagaggaggtacca
ctggaattggttgaagctcacgtcaagaaagtacaagaagcagctcgagcctctgggaaa
gtggaccccacgtatggcctggagagcagttgcattgcaggcacgggacctgatgagcca
gagaagcttgaaggggctgaggaggaaaaaatggaaacagataccgatgttcagcagcct
gaaaaggcagaaaacaaaggggaaaacgaaacagatgaaggtgataaagcacaagatgga
gaaaatgaaaaacatagtgagaaggagcaggacagtgaagttagtgaggataccaaatca
gaagaaaaggaaactgaagagaacaaggaactcactgatacttgtaaagaaagagaaagc
gatctcgggaagaagaaagtagaacatgaaatttccgaaggaaatgtggccacggccgca
gcagctgctcttgcttcagctgcaaccaaagccaagcacctggctgccgtggaagagaga
aagatcaagtctctggtggccctgctggttgagacacaaatgaagaaattggagatcaaa
ctgcgacattttgaggagctggaaactatcatggacagagagaaggaggctttagaacaa
cagaggcagcagttgcttactgaacgccagaacttccacatggaacagctgaaatacgct
gaattgcgagcccgacagcaaatggaacagcagcagcatgggcagaaccctcagcaggca
caccagcactcaggaggacctggcctggcaccactcggagcagcggggcaccccggcatg
atgcctcatcagcagcctcctccctaccctctcatgcaccaccagatgccaccacctcat
ccaccccagccaggtcagataccaggcccaggttccatgatccctgggcagcccatgcca
ggccgcatgattcccaccgttgcagccaacatccacccgcctgggagtggcccagctcct
cccggtatgcctccaatgccaggaaacatcttaggaccccgggtacccctcacggcacct
aacggcatgtatgcccctccgccgcagcagccgccaccgcctccgccgcccacggatgga
gtccctccgcctcctgctccaggcccaccagcctcggccgccccctag

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