Panthera uncia (snow leopard): 125928760
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Entry
125928760 CDS
T08832
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc03082
ATP-dependent chromatin remodeling
puc04714
Thermogenesis
puc05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125928760
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
125928760
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
125928760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
puc03021
]
125928760
03036 Chromosome and associated proteins [BR:
puc03036
]
125928760
Transcription machinery [BR:
puc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125928760
Chromosome and associated proteins [BR:
puc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125928760
PBAF complex
125928760
GBAF(ncBAF) complex
125928760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
DUF919
BRCT_2
Motif
Other DBs
NCBI-GeneID:
125928760
NCBI-ProteinID:
XP_049495388
LinkDB
All DBs
Position
A2:complement(15980116..16153713)
Genome browser
AA seq
1335 aa
AA seq
DB search
MNSKKPKRQRGRAVQVAPTAGARASEAGKSWWCGWGHEGEVKCVPLEQLRVVVPDGCLQR
LRRLDVEGLRAREGRRRFPPFPWVPRPALDTLNGLPPRNFSPGLFSPAVAGDDRSSLHWL
TGRRKELGCSKTRRGPGWVAEEVRSLPRLAEEAGARVRLRPAWPRCCACVRACPLRLRTG
SPEGAGPALRAGRGLTGRGREVAVAAARARARVRTGNAARAGPGGGTTDGDDGRGGGRRR
GAAAGAAGAGGAAAAAGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLGKHYKKYVHAD
APTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCHILGAAYKYKN
EQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLTRPSIYLIPDIDLKLANKLKDIIKR
HQGTFTDEKSKASHHIYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSYDTWVHSNDVD
AEVEDPPIPEKPWKVHARWILDTDVFNEWMNEEDYEVDENRKPVSFRQRISTKNEEPVRS
PERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKEEDEQEDLTKD
MEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGGKEDEDPSKGD
QSRSLDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAY
RNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGP
PPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFGLRTDIYSKKT
LAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPY
LENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVP
LELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMETDTDVQQP
EKAENKGENETDEGDKAQDGENEKHSEKEQDSEVSEDTKSEEKETEENKELTDTCKERES
DLGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIK
LRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQQQHGQNPQQA
HQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGPGSMIPGQPMP
GRMIPTVAANIHPPGSGPAPPGMPPMPGNILGPRVPLTAPNGMYAPPPQQPPPPPPPTDG
VPPPPAPGPPASAAP
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgaaaaagcctaagcgacaaaggggaagagctgtccaggtggcgccaacagct
ggtgctagggcctccgaggcaggaaagagctggtggtgcggctggggccacgagggggaa
gtaaagtgtgtgccgctggagcagctccgggtggtggtcccagatggatgtttacaaagg
ctacggcggcttgatgtagaaggtctgagggcaagagaaggcagacgcagattcccaccc
ttcccgtgggttcctcggccagcactcgacaccctaaacgggcttccccctcggaacttc
tcgccaggtcttttctccccggctgtagcaggggatgacagaagctccctgcactggttg
acgggacgcaggaaggaacttggatgcagcaagacacgcagaggcccaggctgggtagcg
gaggaggtacgcagcctgcctcgactggcggaagaggcgggcgcaagagttcgtctgaga
cctgcctggccccgatgctgcgcatgcgtgcgcgcgtgcccgcttcggttacggaccggg
tccccagaaggggcggggccggccctccgcgccggaagggggttgactgggcggggccgg
gaggtggcggtggcggctgcgcgcgcgcgcgcgcgggtgcgaacggggaacgctgcgagg
gccgggccgggcggtgggacgacggacggcgacgatggccgcggcggcgggcggcggcgg
ggggcggcggcgggcgccgcgggcgcgggaggcgcggcggcggctgcgggcctggccgtt
tatcggcggaaggacggtggcccggccagcaagttttgggaaagcccggagacggtgtcc
cagctggattcggtgcgggtctggctgggcaagcactacaagaagtatgttcacgcagat
gctcctaccaacaaaactctggctgggctagtggtacagcttctccaattccaggaagat
gcctttgggaagcatgtcaccaacccggccttcaccaaacttccagcaaaatgtttcatg
gatttcaaagctggaggcaccttgtgtcacattcttggggctgcttacaagtataaaaat
gaacagggatggcgtaggtttgatctacagaatccatctcgaatggatcgtaacgttgaa
atgtttatgaatattgaaaaaacattggtgcagagcaattgtctgaccagacccagcatc
tacctcattccagacattgatctgaagttggctaacaaattgaaagatatcatcaaacga
catcaggggacatttactgatgagaagtcaaaggcttcccaccacatttatccatatcct
tcctctcaagaggatgaagaatggttgagaccggtgatgagaaaagataagcaggtgtta
gtgcactgggggttttacccagacagctatgatacttgggtccatagtaatgatgttgat
gcagaagttgaagatcccccaattccggaaaagccatggaaggttcatgcaagatggatt
ttggatactgatgttttcaatgaatggatgaatgaggaggattatgaggtggatgagaac
aggaagcctgtgagttttcgtcagcgaatttcaacaaagaatgaagagccagtcagaagt
ccagagagaagagataggaaagcatcagctaatgctcgaaagaggaaacattcgccttcc
cctccacctccaacacccacagaatcccggaagaaaagtggaaagaaaggccaagctagt
ctttatgggaagcgcagaagtcagaaagaggaagatgagcaagaagatcttaccaaggac
atggaagacccaacaccagtacccaacatagaggaagtggtacttccaaaaaatgtgaac
ccaaagaaagatagtgaaaatacacctgttaaaggaggaactgtggcagatctagatgag
caggatgaagaaacagtcacaacaggaggaaaggaagacgaagatcctagcaaaggtgat
cagagtcgttcacttgacccaggagaagataatgtgacagagcagaccaatcacattatt
attcctagttatgcatcatggtttgattataactgtattcacgtgattgaacggcgtgct
cttcctgaatttttcaatgggaaaaacaaatccaagactccagaaatatacttggcatat
cgaaattttatgattgacacatatcgcctaaacccccaagaatatttaaccagcactgct
tgtcggcgaaacttgactggagatgtgtgtgctgtgatgagggttcatgcctttttagag
cagtgggggcttgtcaattatcaagtggatccagaaagtcgacccatggcaatgggacct
cctcctactcctcatttcaatgtattagctgataccccttctgggcttgtgcctctacat
cttcgatcacctcaggtccctgctgctcagcagatgttaaattttcctgagaagaacaag
gaaaaaccaattgatttgcagaactttggtcttcgtactgacatttactccaagaaaacc
ttagcaaagagtaaaggtgctagtgctggaagagaatggactgaacaggagacccttctg
ctcctggaggccctggagatgtacaaggatgattggaacaaagtgtcagagcatgtcgga
agtcgtactcaggatgaatgcatcctccactttctgaggcttcctattgaggacccgtac
cttgagaattcggatgcctccctggggcccctagcttaccagcctgtccctttcagtcag
tcaggaaacccagtcatgagcactgttgcttttttggcatccgtggtggaccctcgtgtg
gcatctgctgcagcaaaagcagctttggaggagttttctcgggtccgagaggaggtacca
ctggaattggttgaagctcacgtcaagaaagtacaagaagcagctcgagcctctgggaaa
gtggaccccacgtatggcctggagagcagttgcattgcaggcacgggacctgatgagcca
gagaagcttgaaggggctgaggaggaaaaaatggaaacagataccgatgttcagcagcct
gaaaaggcagaaaacaaaggggaaaacgaaacagatgaaggtgataaagcacaagatgga
gaaaatgaaaaacatagtgagaaggagcaggacagtgaagttagtgaggataccaaatca
gaagaaaaggaaactgaagagaacaaggaactcactgatacttgtaaagaaagagaaagc
gatctcgggaagaagaaagtagaacatgaaatttccgaaggaaatgtggccacggccgca
gcagctgctcttgcttcagctgcaaccaaagccaagcacctggctgccgtggaagagaga
aagatcaagtctctggtggccctgctggttgagacacaaatgaagaaattggagatcaaa
ctgcgacattttgaggagctggaaactatcatggacagagagaaggaggctttagaacaa
cagaggcagcagttgcttactgaacgccagaacttccacatggaacagctgaaatacgct
gaattgcgagcccgacagcaaatggaacagcagcagcatgggcagaaccctcagcaggca
caccagcactcaggaggacctggcctggcaccactcggagcagcggggcaccccggcatg
atgcctcatcagcagcctcctccctaccctctcatgcaccaccagatgccaccacctcat
ccaccccagccaggtcagataccaggcccaggttccatgatccctgggcagcccatgcca
ggccgcatgattcccaccgttgcagccaacatccacccgcctgggagtggcccagctcct
cccggtatgcctccaatgccaggaaacatcttaggaccccgggtacccctcacggcacct
aacggcatgtatgcccctccgccgcagcagccgccaccgcctccgccgcccacggatgga
gtccctccgcctcctgctccaggcccaccagcctcggccgccccctag
DBGET
integrated database retrieval system