Panthera uncia (snow leopard): 125929912
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Entry
125929912 CDS
T08832
Name
(RefSeq) collagen alpha-2(I) chain
KO
K06236
collagen type I alpha
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc04151
PI3K-Akt signaling pathway
puc04510
Focal adhesion
puc04512
ECM-receptor interaction
puc04611
Platelet activation
puc04820
Cytoskeleton in muscle cells
puc04926
Relaxin signaling pathway
puc04933
AGE-RAGE signaling pathway in diabetic complications
puc04974
Protein digestion and absorption
puc05146
Amoebiasis
puc05165
Human papillomavirus infection
puc05205
Proteoglycans in cancer
puc05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125929912
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125929912
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125929912
09142 Cell motility
04820 Cytoskeleton in muscle cells
125929912
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
125929912
09152 Endocrine system
04926 Relaxin signaling pathway
125929912
09154 Digestive system
04974 Protein digestion and absorption
125929912
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
125929912
09172 Infectious disease: viral
05165 Human papillomavirus infection
125929912
09174 Infectious disease: parasitic
05146 Amoebiasis
125929912
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
125929912
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
125929912
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
puc00536
]
125929912
Glycosaminoglycan binding proteins [BR:
puc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125929912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
125929912
NCBI-ProteinID:
XP_049497431
LinkDB
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Position
A2:93594209..93630307
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AA seq
1367 aa
AA seq
DB search
MLSFVDTRTLLLLAVTSCLATCQSLEEATARKGPTGDRGPRGERGPPGPPGRDGDDGIPG
PPGPPGPPGPPGLGGNFAAQYDPGKGVGLGPGPMGLMGPRGPPGASGAPGPQGFQGPAGE
PGEPGQTGPAGARGPPGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGI
RGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGS
VGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEMGLPGVSGPVGPPGN
PGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGN
KGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGPSGPPGLRGSPGSRGLPGADGRAGVMGP
PGPRGATGPAGVRGPNGDAGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGP
IGPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGV
QGGKGEQGPAGPPGFQGLPGPAGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGA
AGPSGPIGSRGPSGPPGPDGNKGEPGVLGAPGTAGPSGPSGLPGERGAAGIPGGKGEKGE
TGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGEAGPAGPAGPAGPRGSPGERGEVGP
AGPNGFAGPAGAAGQPGAKGERGTKGPKGENGPVGPTGPVGSAGPSGPNGPPGPAGSRGD
GGPPGATGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGLRGPRGDQGPVGRTGETGASGP
PGFAGEKGPSGEPGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVSGSVGEPGPLGI
AGPPGARGPSGAVGAPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNIGPVGA
VGAPGPHGPVGPTGKHGNRGEPGPAGVVGPVGAVGPRGPTGPQGIRGDKGEPGDKGPRGL
PGLKGHNGLQGLPGLAGQHGDQGAPGSVGPAGPRGPAGPSGPMGKDGRTGHPGSVGPAGV
RGSQGSQGPAGPPGPPGPPGPPGPSGGGYDFGYEGDFYRADQPRSPPSLRPKDYEVDATL
KSLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFST
GETCIRAQPENILAKNWYRSSKVKKHVWLGETINGGTQFEYNVEGVTTKEMATQLAFMRL
LANHASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSK
KTNEWKKTIIEYKTNKPSRLPILDIAPLDIGGADQEIRVDVGPVCFK
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctttgtggatacgcggactttgttgctgcttgcagtaacttcgtgcctagca
acatgccaatctttagaagaggcaactgcaagaaagggcccaactggagatagaggacca
cgtggagaaaggggtccaccaggcccaccaggcagagatggtgacgacggtatcccaggc
cctcctggcccacctggtcctcctggcccccctggtcttggcgggaactttgcggctcag
tatgaccctggaaaaggagttggccttggccctggaccaatgggtttgatgggacctaga
gggcctcctggtgcatctggagctcctggtcctcaaggtttccaaggacctgctggtgag
cctggtgagcctggtcaaactggtcctgcgggtgctcgtggtccacctgggcctcctggc
aaggctggtgaggatggtcaccctggaaaaccaggacgacctggtgagagaggagttgtt
ggaccacagggtgctcgtggtttccctgggactcctggacttcctggcttcaagggcatt
aggggacacaatggtctggatggattgaagggacagcctggtgctccaggtgtgaagggt
gaacctggcgcccctggtgaaaatggaactccaggtcaaacaggagctcgtgggcttcct
ggtgagagaggacgtgtcggtgcccctggcccagctggtgcccgtggaagtgatggaagt
gtgggtcctgtgggtcctgctggtcccattgggtctgctggccctccaggcttcccaggt
gctcctggccccaagggtgaacttggaccggtcggtaatcctggtcctgctggtcctgcg
ggtccccgtggtgaaatgggtcttccaggtgtttctggccctgttggacctcctggtaac
cctggagccaacggcctgactggtgcgaagggtgctgctggcttgcccggtgttgctggg
gcacctggcctccctggaccccgtggtattcccggccctgttggtgctgctggcgctact
ggtgccagaggactcgttggtgaacctggtccagctggttccaaaggagagagtggcaac
aagggtgagcccggctctgctggtcctcaaggtcctcctggtcccagtggtgaagaagga
aagagaggccccaatggtgaagctggatccgctggcccctctgggcctcctgggctgaga
ggaagtcctggttctcgtggtctccctggagctgatggcagagccggtgttatgggccct
cctggcccccgcggtgctactggccctgctggtgtccgaggccccaatggagatgctggt
cgccctggagagcccggcctcatgggaccccgaggttttcctggtgcccctggaaatgtt
ggcccagctggcaaagaaggtcccatgggcctccctggcattgatggccggcctggacca
attggcccagctggagcaagaggagagcctggcaacatcggattccctggccccaaaggc
cccactggtgatccaggcaaaaatggcgataaaggtcatgctggtcttgccggtgctcgg
ggtgctccaggtcctgacggaaacaatggtgctcagggaccccctggaccacaaggtgtc
caaggtggaaaaggtgaacagggtcccgctggtcctccaggcttccagggtctgcctggc
cctgcaggtacagctggtgaagttggcaaaccaggagaaaggggtctccctggtgaattt
ggtctccctggtcctgctggcccaagaggggagcgtgggccccctggtgaaagtggtgct
gctggtccttctggtcctattggaagccgaggtccttctggaccccctgggcctgatgga
aacaagggtgaacctggtgtgcttggtgctccaggcactgctggtccatctggtcccagt
ggactcccaggagagaggggtgctgccggcatacctggaggcaagggagaaaagggtgaa
actggtctcagaggtgaaattggtaacccaggcagagatggtgcccgtggtgctcctggt
gctgtaggtgcccctggtcctgctggagccactggtgaccggggtgaagccggtcctgcc
ggtcccgctggtcctgctggtcctcgtggtagccctggtgaacgtggtgaagttggtccc
gctggccccaacggatttgctggtcctgctggtgctgctggtcaacctggtgctaaagga
gagagaggaaccaaagggcccaagggtgaaaatggccccgttggtcccacgggccctgtt
ggatctgctggcccatctggtccaaatggtccccctggtcctgctggcagtcgtggtgat
ggtggccctcctggtgctactggtttccctggtgctgctggacggactggtcctcctgga
ccctctggtatcactggccctcctggtccccctggtgctgctggtaaagaaggacttcgt
gggcctcggggtgaccaaggtccagttggccgaacaggggaaacaggtgcatctggtccc
cctggctttgctggtgagaagggtccctctggagagcctggaactgctggaccccctgga
acccctggtcctcaaggtcttcttggtgctcctggtattctgggtctcccaggctctaga
ggtgaacgtggtctaccaggtgtttctggatctgtgggtgaacctggacctctcggcatc
gctggtccacctggggctcgtggtccctctggtgctgtgggcgcacctggagtcaatggt
gctcctggtgaagctggtcgggatggcaaccctgggaatgatggtcccccaggccgcgac
ggtcaacctggacacaagggagaacgcggttaccctggcaacattggtccagttggcgct
gtgggcgcacctggtcctcatggccccgtgggtcccactggaaaacatggaaaccgtggt
gaacctggtcctgctggtgttgttggtcccgttggtgctgttggtccaagaggtcctact
ggcccacaaggtattcgaggtgataaaggagagcctggtgacaaggggcctagaggtctt
cctggcttaaagggacacaatggactgcaaggtcttcctggtcttgctggccaacatggc
gatcaaggtgctcctggctctgtgggtcctgctggtcctaggggccctgctggtccttct
ggccctatgggcaaagacggtcgcactggacatcctggttcagtcggacctgctggcgtt
cgtggctctcagggtagccaaggtcctgctggcccccctggtccccctggccctcctgga
cctcctggcccaagtggtggtggttatgattttggttacgaaggggacttctacagggct
gaccagcctcgctcaccaccttctctcagacccaaggattatgaagttgatgctactctg
aaatctctcaacaaccagattgagacccttcttactcctgaaggctctaggaagaaccca
gctcgcacatgccgtgacttgagacttagccaccccgagtggagcagtggttactactgg
attgaccctaaccaaggatgcactatggatgctatcaaagtatactgtgatttctctact
ggcgaaacctgtatccgggctcaacctgaaaacatcctagccaagaactggtacagaagt
tccaaggtcaagaagcacgtgtggttaggagaaactatcaatggtggtacccagtttgaa
tataatgttgaaggagtaaccaccaaggaaatggctactcaacttgccttcatgcgcctg
ctggccaaccatgcctctcaaaacatcacctaccactgcaagaacagcattgcatacatg
gatgaggagactggcaacctgaaaaaggctgtcattctgcaaggctccaacgatgttgaa
cttgttgccgagggcaacagcaggttcacttacactgttcttgtagacggctgctctaaa
aagacaaatgaatggaaaaagacaatcattgaatacaaaacaaataagccatcccgcctg
cctatccttgatattgcacctttggacatcggtggtgctgaccaagaaatcagggtggac
gttggcccagtctgtttcaaataa
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