Panthera uncia (snow leopard): 125930630
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Entry
125930630 CDS
T08832
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125930630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
puc03019
]
125930630
Messenger RNA biogenesis [BR:
puc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125930630
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
125930630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
125930630
NCBI-ProteinID:
XP_049498499
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Position
A2:13916078..13952793
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AA seq
322 aa
AA seq
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MTHKRMGWEGGAAGAGATRADDVRRTGRLGSMASVALSEAEKVYIVHGVQEDLRVDGRGC
EDYRCVEVETDVVSNTSGSARVKLGHTDILVGVKAEMGTPKLEKPNEGYLEFFVDCSANA
TPEFEGRGGDDLGTEIANTLYRIFNNKSSVDLKSLCISPREHCWILYVDVLLLECGGNLF
DTISIAVKAALFNTRIPRVRVLEDEEGSKDIELSDDPYDCIRLSVEHVPCIVTLCKIGYR
HVVDATLQEEACSLASLLVSVTSKGVVTCMRKVGKGSLDPESIFEMMETGKRVGKVLHAS
LQSILHKEESLGPKRQKVGFLG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacaagcgcatgggctgggaggggggcgcggccggcgcgggagcgacgcgagcc
gatgacgtgcggcgaacggggcggctcggcagcatggcgtccgtggcgctgagcgaggcc
gagaaggtgtatatcgtgcacggcgttcaggaagacctccgtgtggacggccgtggctgt
gaggactaccgatgtgtcgaagtggaaaccgacgtggtgtccaacaccagtgggtctgcc
agggtcaagctgggtcacacagacatcttggtgggagtgaaagccgaaatggggacgccc
aagctggagaaacccaatgaagggtacttggagttcttcgttgactgttcagccaatgct
actcctgaatttgaaggccggggaggtgatgaccttggcacggagattgctaacaccctc
taccggatatttaacaataagagcagcgttgacctgaagtccctctgcatcagtccccgg
gagcactgctggattctctatgtggacgtgctgctgctggaatgtggcgggaatttgttc
gacaccatctccattgctgtaaaggctgctctcttcaatacaaggatcccaagagttcgg
gttctagaggatgaagaggggtccaaggatattgagctctcggatgacccttatgactgc
atccggctaagcgtggagcatgtcccctgcattgtcaccctgtgcaagattggctaccgg
catgtagtggatgctactctccaggaggaggcctgctccttggccagcttgctggtgtcc
gtgaccagcaagggagtcgtgacatgcatgaggaaagtggggaagggcagcctggaccca
gagagcatcttcgagatgatggagactggcaagcgagtgggcaaggtgctgcacgcctcc
ctgcagagcattctacacaaggaggaaagcctggggcccaagagacagaaagtcggattc
ctgggatga
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