Panthera uncia (snow leopard): 125931286
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Entry
125931286 CDS
T08832
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc04613
Neutrophil extracellular trap formation
puc05014
Amyotrophic lateral sclerosis
puc05034
Alcoholism
puc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
125931286
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
125931286
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125931286
09165 Substance dependence
05034 Alcoholism
125931286
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
puc01009
]
125931286
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
puc03019
]
125931286
04131 Membrane trafficking [BR:
puc04131
]
125931286
03036 Chromosome and associated proteins [BR:
puc03036
]
125931286
Enzymes [BR:
puc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
125931286
Protein phosphatases and associated proteins [BR:
puc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125931286
Messenger RNA biogenesis [BR:
puc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125931286
Membrane trafficking [BR:
puc04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
125931286
Chromosome and associated proteins [BR:
puc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
125931286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
125931286
NCBI-ProteinID:
XP_049499192
LinkDB
All DBs
Position
X:40564185..40587152
Genome browser
AA seq
1154 aa
AA seq
DB search
MTSTGQDSTSTRQRRSRHNPHSPPHDSSVTSKRGVKKGAILSSSPSLAEVKKKGRMKKLS
QAAEQDLIMDLRRLDLNLEAKTLSGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLI
QEGLLDRCVSFQARFAEKDELMLVHSLEYIDLMETTQYMNERELRILADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLGKEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHDIQRVLIVDWDVHHVGSCQLRAICPLWVSNITGFALLPPPWSQGVLYFSIHRYEQGRF
WPHLKASNWSTIGFGHGQGYTINVPWNQVGMRDADYIAAFLHLLLPVALEFQPQLVLVAA
GFDALRGDPKGEMATTPAGFAQLTHLLMGLAEGKLILSLEGGYNLRSLAEGVSASLHTLL
GDPCPILESPGAPCPSALVSLCCALEALEPFWEVLVRSVETPEEDILEEDSAEEKDEEGL
WRPPALPILTWPMLQARTGLVYDQRMMGHHNLWDNHHPEMPQRVLRIMQRLEELGLAGRC
LTLPARPAMEAELLTCHSAEYVGRLRATEKMKTRELHREGSNFDSIYICPSTFACAQLAT
GAVCRLVEAVLAGEVLNGTAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAISGQALRI
LIVDWDVHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGEEGASSQIGRAAGTGFTVNV
AWNGPRVGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAAWGDPLGGCQVSPEGYAHLT
HLLMGLANGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLSRPPLSGALASITET
IQVHRRYWRSLRVMKVEDKEEEPSLSKSVTNPGSAKRMTTPERNILDAGTEKAVSASSVE
ESTLGQPKSETAMVELSQDQSLEAPTQKAMLDQTTSQAATVEATAGQTTSEEAVGGAEMI
QTPPALCTDNQTPTASPEQGATSQISPSELIENLRTLELNCKAQEAPESQIPEEDKLLGE
AAGGQDMLIQSFGVHANTDQAIFYAVTPLPWCPHLVAVCPIPESGLDVTQPCQDCGTLQE
NWVCLSCYQVYCGRYVSAHMLQHHEGSGHPLVLSYVDLSTWCYSCEAYVHHQSLLEVKNI
AHQKKFGEDMPHSH
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgacctccacgggccaggattccacctcaaccaggcagcgaaggagtaggcataacccc
cattcgcccccccacgactccagcgtcacctcgaagcgaggtgttaagaagggtgccata
ctctcctccagccctagtctagcagaggtaaagaagaaaggcagaatgaagaagctcagc
caagcagcagagcaagacctaatcatggacctgcgaaggctggatctgaaccttgaggcc
aagacactgtctggcactggtttggtgttcgatgagcagctaaatgaattccactgcctc
tgggatgacagcttccctgaaggccctgaacgactccatgccatcaaggaacagctgatc
caggagggcctcctggaccgctgtgtgtcctttcaggctcgatttgctgaaaaggatgag
ctgatgttggttcacagcctagaatacattgatctgatggagacgacccagtacatgaat
gagagagagctccgcatcctagcagacacctatgactcagtttatctgcatccgaactcc
tatacctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgctgtcctgggg
aaggagatacggaatggcatggccatcatcaggcctcctggacaccacgcccagcacagt
cttatggatgggtattgcatgttcaaccacgtggccgtggctgcccgctacgctcaacag
aagcatgacattcagagggtccttatcgtggattgggatgttcaccacgttggatcctgc
cagctaagagctatatgtcccctgtgggtctccaacatcacaggatttgccttgctgcca
ccaccttggtcacagggcgtcctctatttctccatccaccgttatgagcagggtcggttc
tggccccaccttaaggcctctaactggtccaccataggttttggtcatggccagggatat
accatcaatgtgccttggaaccaggtggggatgcgagatgccgactatattgccgctttc
ctgcacctccttctgccggtcgcccttgagttccagccccagctggtcctggtggccgct
ggatttgatgcccttcgaggggaccccaagggcgagatggccaccactccagcagggttc
gctcagctaacccacttgctcatgggtctggcagaaggcaaactgatcctgtctctggag
ggtggctacaaccttcgttccttggctgagggcgtcagtgcctcactccacacccttctg
ggagacccttgccccatactggagtcccctggcgccccctgcccaagtgccctggtgtca
ctgtgctgcgctctggaagccctggagcccttctgggaggtccttgtaagatcagttgag
accccggaggaggacatcctggaggaagatagcgcagaggagaaggatgaagagggactg
tggcggcccccagcgctcccaatcctgacgtggcccatgctacaggctcgcacagggctg
gtctatgaccagcggatgatgggtcaccacaacttgtgggacaaccaccacccagagatg
cctcagcgagtcttacgaatcatgcagcgtttggaggagctgggccttgcggggcgctgc
ctcacgctgcccgcacgtcccgccatggaagccgaactgctcacctgccacagtgctgag
tacgtgggtcgtctgcgggccacagagaagatgaaaacccgggagctgcaccgcgagggt
tccaactttgattccatctacatctgccccagcacctttgcctgtgcgcagctggccact
ggcgccgtctgccgcctggtggaggctgtgctggcgggagaggttttgaatggtaccgct
gtggtgcgtcccccaggacaccatgctgagcgggatgccgcttgtggtttctgctttttt
aattctgtggctgtggctgctcgccatgcccaggccatcagtgggcaggcgctgcggatc
ctgatagtggactgggacgtccatcatggtaatggaactcagcacatatttgaggaggac
cccagcgtactgtacatttccctgcaccggtatgaccatggcaccttctttcccatgggg
gaggagggtgccagcagccagataggccgggccgcaggcactggcttcactgtcaacgtg
gcctggaatggaccccgtgtgggtgacgccgactacctggctgcatggcatcgcctggtg
cttcctattgcctacgagtttaacccagagctggtgctggtctcagcgggctttgacgcc
gcatggggggacccactggggggctgccaggtgtcgcctgagggctatgcccacctcacc
cacctgctgatgggccttgccaatggccgcattatcctaatcctagagggtggctataac
ctgacatccatctcggagtccatggctgcctgtacccgctccctccttggggacccaccc
ccactgctgaccttgtcgcggcccccactatcaggggccctggcctcaatcaccgagacc
atccaagtccatcgcagatactggcgcagcttacgggtcatgaaggtggaagacaaggag
gaggaaccctccctttctaagtcagtcaccaaccctgggtcagctaagaggatgaccaca
ccagaaaggaacattctggatgcaggcacagagaaggctgtctcagcatcatctgtggaa
gagtccactctaggccaacctaagtcagagactgctatggtggagctcagtcaggaccag
tccttggaggctcccacacagaaagccatgctggaccagaccacctcacaggcagccaca
gtggaggccacagcaggccagaccacctcagaggaggctgttgggggagctgagatgatc
caaacccctccagctttatgtactgacaaccagactcccacagcctcacctgagcaaggt
gccacatcccaaatatcccccagtgagctgattgagaatctcaggaccttggaactaaac
tgcaaggctcaggaggcaccagaatctcagatcccagaagaggataagctactgggagag
gcagctggaggtcaggacatgctgattcagagctttggggtccatgctaacactgaccag
gccatcttttatgctgtgacacctctgccctggtgtccccatttggtggcagtatgtccc
atacctgaatcaggcctggacgtgacccaaccttgtcaggactgtggaacactccaggag
aactgggtgtgtctgtcttgctatcaggtctactgtggtcgttatgtcagtgcccatatg
ctgcaacaccacgaagggtcaggacacccgctggtcctcagctacgtcgatctgtctacc
tggtgttacagctgtgaggcctatgtccaccaccagtctctcctagaagtgaagaacatc
gcccaccagaaaaagtttggggaggacatgccccactcacactga
DBGET
integrated database retrieval system