KEGG   Panthera uncia (snow leopard): 125931286
Entry
125931286         CDS       T08832                                 
Name
(RefSeq) histone deacetylase 6
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
puc  Panthera uncia (snow leopard)
Pathway
puc04613  Neutrophil extracellular trap formation
puc05014  Amyotrophic lateral sclerosis
puc05034  Alcoholism
puc05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:puc00001]
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    125931286
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    125931286
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    125931286
  09165 Substance dependence
   05034 Alcoholism
    125931286
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:puc01009]
    125931286
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:puc03019]
    125931286
   04131 Membrane trafficking [BR:puc04131]
    125931286
   03036 Chromosome and associated proteins [BR:puc03036]
    125931286
Enzymes [BR:puc01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     125931286
Protein phosphatases and associated proteins [BR:puc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     125931286
Messenger RNA biogenesis [BR:puc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     125931286
Membrane trafficking [BR:puc04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    125931286
Chromosome and associated proteins [BR:puc03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     125931286
SSDB
Motif
Pfam: Hist_deacetyl zf-UBP zf-UBP_var
Other DBs
NCBI-GeneID: 125931286
NCBI-ProteinID: XP_049499192
LinkDB
Position
X:40564185..40587152
AA seq 1154 aa
MTSTGQDSTSTRQRRSRHNPHSPPHDSSVTSKRGVKKGAILSSSPSLAEVKKKGRMKKLS
QAAEQDLIMDLRRLDLNLEAKTLSGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLI
QEGLLDRCVSFQARFAEKDELMLVHSLEYIDLMETTQYMNERELRILADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLGKEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHDIQRVLIVDWDVHHVGSCQLRAICPLWVSNITGFALLPPPWSQGVLYFSIHRYEQGRF
WPHLKASNWSTIGFGHGQGYTINVPWNQVGMRDADYIAAFLHLLLPVALEFQPQLVLVAA
GFDALRGDPKGEMATTPAGFAQLTHLLMGLAEGKLILSLEGGYNLRSLAEGVSASLHTLL
GDPCPILESPGAPCPSALVSLCCALEALEPFWEVLVRSVETPEEDILEEDSAEEKDEEGL
WRPPALPILTWPMLQARTGLVYDQRMMGHHNLWDNHHPEMPQRVLRIMQRLEELGLAGRC
LTLPARPAMEAELLTCHSAEYVGRLRATEKMKTRELHREGSNFDSIYICPSTFACAQLAT
GAVCRLVEAVLAGEVLNGTAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAISGQALRI
LIVDWDVHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGEEGASSQIGRAAGTGFTVNV
AWNGPRVGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAAWGDPLGGCQVSPEGYAHLT
HLLMGLANGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLSRPPLSGALASITET
IQVHRRYWRSLRVMKVEDKEEEPSLSKSVTNPGSAKRMTTPERNILDAGTEKAVSASSVE
ESTLGQPKSETAMVELSQDQSLEAPTQKAMLDQTTSQAATVEATAGQTTSEEAVGGAEMI
QTPPALCTDNQTPTASPEQGATSQISPSELIENLRTLELNCKAQEAPESQIPEEDKLLGE
AAGGQDMLIQSFGVHANTDQAIFYAVTPLPWCPHLVAVCPIPESGLDVTQPCQDCGTLQE
NWVCLSCYQVYCGRYVSAHMLQHHEGSGHPLVLSYVDLSTWCYSCEAYVHHQSLLEVKNI
AHQKKFGEDMPHSH
NT seq 3465 nt   +upstreamnt  +downstreamnt
atgacctccacgggccaggattccacctcaaccaggcagcgaaggagtaggcataacccc
cattcgcccccccacgactccagcgtcacctcgaagcgaggtgttaagaagggtgccata
ctctcctccagccctagtctagcagaggtaaagaagaaaggcagaatgaagaagctcagc
caagcagcagagcaagacctaatcatggacctgcgaaggctggatctgaaccttgaggcc
aagacactgtctggcactggtttggtgttcgatgagcagctaaatgaattccactgcctc
tgggatgacagcttccctgaaggccctgaacgactccatgccatcaaggaacagctgatc
caggagggcctcctggaccgctgtgtgtcctttcaggctcgatttgctgaaaaggatgag
ctgatgttggttcacagcctagaatacattgatctgatggagacgacccagtacatgaat
gagagagagctccgcatcctagcagacacctatgactcagtttatctgcatccgaactcc
tatacctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgctgtcctgggg
aaggagatacggaatggcatggccatcatcaggcctcctggacaccacgcccagcacagt
cttatggatgggtattgcatgttcaaccacgtggccgtggctgcccgctacgctcaacag
aagcatgacattcagagggtccttatcgtggattgggatgttcaccacgttggatcctgc
cagctaagagctatatgtcccctgtgggtctccaacatcacaggatttgccttgctgcca
ccaccttggtcacagggcgtcctctatttctccatccaccgttatgagcagggtcggttc
tggccccaccttaaggcctctaactggtccaccataggttttggtcatggccagggatat
accatcaatgtgccttggaaccaggtggggatgcgagatgccgactatattgccgctttc
ctgcacctccttctgccggtcgcccttgagttccagccccagctggtcctggtggccgct
ggatttgatgcccttcgaggggaccccaagggcgagatggccaccactccagcagggttc
gctcagctaacccacttgctcatgggtctggcagaaggcaaactgatcctgtctctggag
ggtggctacaaccttcgttccttggctgagggcgtcagtgcctcactccacacccttctg
ggagacccttgccccatactggagtcccctggcgccccctgcccaagtgccctggtgtca
ctgtgctgcgctctggaagccctggagcccttctgggaggtccttgtaagatcagttgag
accccggaggaggacatcctggaggaagatagcgcagaggagaaggatgaagagggactg
tggcggcccccagcgctcccaatcctgacgtggcccatgctacaggctcgcacagggctg
gtctatgaccagcggatgatgggtcaccacaacttgtgggacaaccaccacccagagatg
cctcagcgagtcttacgaatcatgcagcgtttggaggagctgggccttgcggggcgctgc
ctcacgctgcccgcacgtcccgccatggaagccgaactgctcacctgccacagtgctgag
tacgtgggtcgtctgcgggccacagagaagatgaaaacccgggagctgcaccgcgagggt
tccaactttgattccatctacatctgccccagcacctttgcctgtgcgcagctggccact
ggcgccgtctgccgcctggtggaggctgtgctggcgggagaggttttgaatggtaccgct
gtggtgcgtcccccaggacaccatgctgagcgggatgccgcttgtggtttctgctttttt
aattctgtggctgtggctgctcgccatgcccaggccatcagtgggcaggcgctgcggatc
ctgatagtggactgggacgtccatcatggtaatggaactcagcacatatttgaggaggac
cccagcgtactgtacatttccctgcaccggtatgaccatggcaccttctttcccatgggg
gaggagggtgccagcagccagataggccgggccgcaggcactggcttcactgtcaacgtg
gcctggaatggaccccgtgtgggtgacgccgactacctggctgcatggcatcgcctggtg
cttcctattgcctacgagtttaacccagagctggtgctggtctcagcgggctttgacgcc
gcatggggggacccactggggggctgccaggtgtcgcctgagggctatgcccacctcacc
cacctgctgatgggccttgccaatggccgcattatcctaatcctagagggtggctataac
ctgacatccatctcggagtccatggctgcctgtacccgctccctccttggggacccaccc
ccactgctgaccttgtcgcggcccccactatcaggggccctggcctcaatcaccgagacc
atccaagtccatcgcagatactggcgcagcttacgggtcatgaaggtggaagacaaggag
gaggaaccctccctttctaagtcagtcaccaaccctgggtcagctaagaggatgaccaca
ccagaaaggaacattctggatgcaggcacagagaaggctgtctcagcatcatctgtggaa
gagtccactctaggccaacctaagtcagagactgctatggtggagctcagtcaggaccag
tccttggaggctcccacacagaaagccatgctggaccagaccacctcacaggcagccaca
gtggaggccacagcaggccagaccacctcagaggaggctgttgggggagctgagatgatc
caaacccctccagctttatgtactgacaaccagactcccacagcctcacctgagcaaggt
gccacatcccaaatatcccccagtgagctgattgagaatctcaggaccttggaactaaac
tgcaaggctcaggaggcaccagaatctcagatcccagaagaggataagctactgggagag
gcagctggaggtcaggacatgctgattcagagctttggggtccatgctaacactgaccag
gccatcttttatgctgtgacacctctgccctggtgtccccatttggtggcagtatgtccc
atacctgaatcaggcctggacgtgacccaaccttgtcaggactgtggaacactccaggag
aactgggtgtgtctgtcttgctatcaggtctactgtggtcgttatgtcagtgcccatatg
ctgcaacaccacgaagggtcaggacacccgctggtcctcagctacgtcgatctgtctacc
tggtgttacagctgtgaggcctatgtccaccaccagtctctcctagaagtgaagaacatc
gcccaccagaaaaagtttggggaggacatgccccactcacactga

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