Panthera uncia (snow leopard): 125931892
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Entry
125931892 CDS
T08832
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc04151
PI3K-Akt signaling pathway
puc04510
Focal adhesion
puc04512
ECM-receptor interaction
puc04820
Cytoskeleton in muscle cells
puc04926
Relaxin signaling pathway
puc04933
AGE-RAGE signaling pathway in diabetic complications
puc04974
Protein digestion and absorption
puc05146
Amoebiasis
puc05165
Human papillomavirus infection
puc05200
Pathways in cancer
puc05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125931892
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125931892
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125931892
09142 Cell motility
04820 Cytoskeleton in muscle cells
125931892
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
125931892
09154 Digestive system
04974 Protein digestion and absorption
125931892
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125931892
09162 Cancer: specific types
05222 Small cell lung cancer
125931892
09172 Infectious disease: viral
05165 Human papillomavirus infection
125931892
09174 Infectious disease: parasitic
05146 Amoebiasis
125931892
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
125931892
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
puc04147
]
125931892
00536 Glycosaminoglycan binding proteins [BR:
puc00536
]
125931892
Exosome [BR:
puc04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
125931892
Glycosaminoglycan binding proteins [BR:
puc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125931892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
125931892
NCBI-ProteinID:
XP_049500122
LinkDB
All DBs
Position
X:84737003..84974675
Genome browser
AA seq
1685 aa
AA seq
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MQLRGISLAAGLFLLALSLWGQPAEAAACYGCSPGSKCDCSGVKGEKGERGFPGLEGHPG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NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgcgtggaatcagcctggctgccggcttgttcttactggccctcagtctttgg
gggcagcctgcagaggctgcggcttgctatgggtgttctccaggatcaaaatgtgactgt
agtggtgtaaaaggagaaaagggggagagagggtttccaggtttggaaggccatccaggt
ttgcctggatttccaggtccagaagggcctccagggcctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaagggatcagaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctggaatgccaggccttgatggagccccaggacctcaaggt
atcccaggatgcaatggaaccaagggagaacgtggatttccaggcagtcccggttttcct
ggtttacagggtcctccaggacctcctgggatcccaggtatgaagggagaaccaggtagt
ataattatgtcatcgctgccaggaccaaagggtaatccaggatatccaggtcctcctgga
atacaaggcccagctggtcccactggtttaccagggccaattggtcccccaggaccacca
ggtttgatgggccctcctggcccaccaggatttccaggaccaaaggggaatatgggctta
aatttccaaggacccaagggtgaaaagggtgagcaaggccttcagggcccccctgggcca
cctggacagatcagtgaacagaaaagaccaattgatgtagagtttcagaaaggagatcag
ggacttcctggtgaccgagggcctcctggacctccagggatacgtggtcctccaggtcct
ccaggtggtgtgaaaggtgagaagggtgagcaaggagagcctggcaaacgaggtaaaccg
ggcaaagatggagagaatgggcagccaggaattccaggtttacctggtgatcctggttcc
cctggtgaaccaggaagggatggagaaaagggccaaaaaggtgacattggcccaactggg
cctcctggacttgtaatccctaggcctgggactggcgtaactgtgggagaaaaaggaagc
attgggttacctggcttgcctggagaaaaaggagagcgaggatttcctggaatacagggt
ccacctggcctccctggacctccagggactgcagttatgggtcctcctggcccccctggc
tttcctggagaaaggggccagaaaggtgatgaaggtccacctggactttctattcctgga
tctcctggacttgatggacagcctggggctcctggacttccagggcctcctggccctcct
ggccctcaaatccctcctagtgatgagatatgtgaagcaggccctcccggccctccagga
tctccaggtgatagaggactccaaggagaacaaggagtgaaaggtgacaaaggtgatacc
tgcttcaactgtattggaactggtatttcagggcctccaggtcaacctggtctgccaggt
cttccaggtcctccaggatctcttggtttccctggacagaagggagaaaaaggacatgct
ggtccaaccggtcccaaaggattaacaggcataccaggagctccaggtcctccaggcttt
cctggatctaaaggtgaacctggtgacatcctcacttttccaggaatgaagggtgacaaa
ggagagatgggttcccctggagtccccgggcttcctggtttacccggtacccctggacag
gatggactaccagggcttcctggccccaaaggagaacctggtggaattgcttttaaaggt
gaaagaggcccccctgggaatccaggcttgccaggtctcccagggaatagggggcctatg
ggccctgtgggttttggccctccaggcccagtaggtgaaaaaggcaatcaaggtgtggca
ggaaatccaggccagccaggaataccaggtcctaaaggtgatccaggtcagaccataacc
caacccgggaagcctggtctgcctggtaacccaggaagagatggtgaagtaggtcttcca
ggtgaccctggacttcccggccagccaggcttgccaggaatacctggtagcaaaggagaa
ccaggtatccctggaattgggcttcctggaccacctggtcccaaaggttttcctggaatt
ccaggacctccaggagcacctgggacacctggaagaattggtctagaaggcccttctggg
ccaccaggctttccaggaccaaagggagaaccaggacttgggctacctgggccacctggg
cccccaggactcccaggtttcaaaggaacacttggtccaaaaggggatcgtggtttccca
ggacctccaggtcctccagggcatgctggcttggatgggcttcctggaccaaaaggtgat
attgggccaaatggacaacctgggccaatgggacctcctgggcttccagggataggtgtt
cagggaccaccagggccaccagggattcctggaccagtaggccaacctggcttacatgga
ataccaggagagaagggagatccaggacctcctgggtttgatgttccaggaccccctggt
gagagaggcagtccaggaattcctggagcacccggtcctatgggacccccaggatcacca
gggattccaggaaaagcaggtgcctctggatttccaggtgccaaaggtgaaatgggtatg
atgggacctccaggcccaccaggacctttgggaattcctggcaggagtggtgttcctggt
ctcaaaggtgataatggttttcagggtcagccaggacctcctggccctgtaggagaaaaa
ggtggtaaaggagagcctggccttccaggccctcctggaccaatggatccagatctgctg
ggctcaaaaggagagaagggggaccctggattaccaggtattcctggagtttcgggtcca
aaaggttaccagggtttgcctggagacccagggcaacctggactaagtggacaacctgga
ttaccaggaccatcaggtcccaaaggtaaccctggtctccctgggaagccaggacttaca
ggacctcctggacttaaaggaagcattggtgatatgggttttccaggccctcagggtgtg
aaagggtctcctggatctcctggagttcctggacaacctggctccccaggattacctgga
cagaaaggagaaaaaggtgatcctggtatttcaggcattggtcttccaggtcttcctggc
ccaaagggtgaacctggtctgcctggatacccaggaaacccgggaatcaaaggttctatg
ggagatactggtttgcctggattaccagggacccctggagcaaaaggacatccaggcctt
cctggattccctggaaccccaggacttcctggaccaaaaggtattagtggtcctcctggg
aaccctggccttccaggagaacctggtcctgtaggtggtggcggtcgtcctgggccacca
gggcctccaggtgaaaaaggcaatccgggtcaagatggtatccctggcccagctggacag
aagggtgaaccaggtcaaccaggctttggaatcccaggaccccctggacttccaggactt
tctggtcaaaagggtgatgggggattacctggcattccaggaaatcctggacttcctggt
ccaaagggagaaccaggctttcagggttttcctggtgtgcagggtcccccaggccctcct
ggttctccagctccagctctggaaggccctaaaggcaaccctgggccccaaggtcctcct
gggagaccaggtctaccaggtccagaaggtccccggggtctccctggaaaaggaggtatt
aaaggagagagaggaaacccaggccaacctgggcaacctggtttgcctggtttgaaagga
gatcaaggaccaccaggactccagggtaatcctggtcggccaggtctcaatggaatgaaa
ggagatcctggtctcccaggtgttccaggatttccaggcatgaagggacccagtggaata
cctggttcaactggccctgaaggggatccaggacttgttggccccccaggtccccctgga
ttacctggtccttcaggacagagtattataatcaaaggagatgttggtccaccagggatc
ccaggccagcctggattaaaaggtctaccaggactaccaggacctcaaggcttaccaggt
ccaattggccctccaggagatcctggacgcaacggactcccgggctttgatggtgcagga
gggcgcaaaggagacccaggtctgccaggccagccaggtacccgtggtttggatggtccc
cctggaccagatggattgcagggtcccccaggccccccaggaacctcctctattgcccat
ggattcctcatcacacgtcacagccagacaacagatgcaccacaatgcccacatggaact
gtccagatttatgaaggattttctctcctgtatgttcaaggaaataaaagagctcatggt
caagacttggggacggctggcagctgccttcgtcgctttagtaccatgcctttcatgttc
tgcaacatcaataatgtttgcaactttgcttcaagaaatgactattcttactggctgtcc
accccagagcccatgccaatgagcatggaacccctgaagggccagagaatccagccattc
attagtcgatgtgcagtatgtgaagctcccgccatggtgattgcagttcacagtcagacc
atccagattccccactgtcctcagggatgggattctctctggattggctattccttcatg
atgcacacaagcgcaggagcagagggctcaggtcaagccctggcctcccctggttcctgc
ttagaagagtttcgttcagctcctttcattgaatgtcacggccggggtacctgcaattac
tatgccaactcctacagcttttggctagcaactgtagatgtgtcagacatgttcagcaaa
cctcagtcagaaacactgaaagcaggagacttgaggacacgaattagccgatgtcaagtg
tgcatgaagaggacataa
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