Panthera uncia (snow leopard): 125932183
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Entry
125932183 CDS
T08832
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc05017
Spinocerebellar ataxia
puc05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
125932183
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
125932183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
puc04131
]
125932183
Membrane trafficking [BR:
puc04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
125932183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
125932183
NCBI-ProteinID:
XP_049500652
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Position
D4:complement(8563518..8593564)
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AA seq
845 aa
AA seq
DB search
MGTSARWALWLLLALCWAPRESRATGAGRKAKCEPSQFQCTNGRCITLLWKCDGDEDCAD
GSDEKNCVKKTCAESDFVCNNGQCVPSRWQCDGDPDCEDGSDESPEQCHMRTCRINEISC
GARSTQCIPVSWRCDGEHDCDSGEDEENCGNITCGPDEFTCSSGRCISRNFVCNGQDDCS
DGSDELDCAPPTCGAHEFQCSTSSCIPLSWVCDDDADCSDQSDESLEQCGRQPRMHTKCP
ASETQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGI
RDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDIGKVCNQEQDCRDWSDEPLKECHVNEC
LVNNGGCSHICKDLVIGYACDCAAGFELIDKKICGDIDECQNPGICSQICINLKGGYKCE
CSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDVDIAA
QKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVA
TLDGAKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQ
WPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWI
DGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEEDMENGGCEYLCL
PAPQINDHSPKYTCSCPNGYNLEENGRECHRINVTTAVTEVTVPPKGTSAAWAILPLLLL
AMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKTTEEDLSIDIGRHSASVGHTYPAISVVST
DDDLA
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtccgcgcgctgggcgctctggctgctgctcgcgctgtgctgggcgccccgg
gagagccgcgccaccggagcgggaagaaaagccaaatgtgaaccatcccaattccagtgc
acaaatggccgctgtatcacgttgttgtggaaatgtgatggggacgaagactgtgctgac
ggcagcgatgaaaagaactgtgtgaagaagacatgtgccgagtcggactttgtttgcaac
aatggccaatgtgtccccagccggtggcagtgtgacggagatcccgattgtgaagacggc
tctgacgaaagccccgaacagtgccatatgagaacatgccgcattaatgaaatcagctgt
ggcgcccgctccactcagtgtatccccgtgtcctggagatgtgatggtgaacacgattgt
gacagtggagaagatgaagagaactgtggcaacatcacgtgtggccccgatgagttcacg
tgctccagcggccgctgcatctccaggaatttcgtgtgcaacggccaggacgactgcagc
gacggcagcgacgagctggactgcgcgcccccgacgtgcggcgcccacgagttccagtgc
agcacgtcctcgtgcatccccctcagctgggtgtgtgacgacgacgccgactgctccgac
caatccgacgagtccctggagcagtgcggccgccagccgcggatgcacaccaagtgcccc
gccagcgagacgcagtgcggctcgggcgagtgcatccacaagaagtggcggtgtgacggg
gaccccgactgcaaagacggcagcgacgaggtcaactgtccttcgcgaacctgccgccct
gaccagtttgagtgtgaggacggaagctgcatccacggcagcaggcagtgcaatggcatc
cgagactgcgtggacggctctgatgaagtcaactgcaaaaacgtcaatcagtgcttgggc
cctggcaagttcaagtgcagaagcggggaatgcatagatatcggtaaagtatgtaaccag
gagcaggactgcagggactggagtgacgagcccctcaaagaatgccatgtcaatgaatgc
ctggttaataacggtggctgttctcacatctgcaaggaccttgttatagggtacgcgtgt
gactgtgcagctgggtttgaactgatagataagaaaatctgtggagacattgacgaatgc
caaaacccgggaatctgcagccaaatttgtatcaacctaaaaggcggttacaagtgtgaa
tgtagtcgaggatatcagatggatcttgccactggtgtgtgcaaggcagtaggcaaagaa
ccaagtctgatcttcactaatcgaagagacatccggaagattggcttggagaggaaagaa
tacatccaactagttgaacagctaagaaacacagtggctctggatgtggatatcgctgct
cagaagctgttctgggctgatctaagccaaaaggccatcttcagtgcctcaattgatgac
aaggttggtagacatgttaaaatgatcgacaatgtctataatcctgcagccattgctgtt
gattgggtgtacaagaccatctactggacggatgcggcttctaagactatttcagtagct
accctagatggagccaagaggaagttcctgtttaactctgacttgcgggagcctgcctcc
atagctgtggacccactgtctggctttgtttactggtcagactggggagaacccgctaaa
atagaaaaagcgggcatgaatggatttgatagacggcctctggtgacagtggacatccaa
tggcctaatggaattacccttgaccttataaagagccgtctctattggctcgactccaag
ctgcacatgttgtccagcgtggacttgaatggccaagatcgtaggattgtcctcaagtct
ctggagttcctagctcatcctctcgcactaaccatatttgaggatcgtgtctactggatc
gatggggaaaatgaagcagtctatggggccaataaattcactggatcagagctggccact
ctcgttaacaaccttaatgatgcccaagacatcattgtctatcatgaacttgtacagcca
tcaggtaaaaattggtgtgaagaagacatggagaatggaggatgtgaatacctgtgcctg
ccagcaccacaaattaacgatcactctccaaagtatacctgttcctgtcccaatgggtac
aatctagaggaaaacggccgggagtgccacaggatcaatgtgaccacagcggtaacggag
gtcaccgttcctccgaaaggcacttctgctgcctgggccatccttcctctcttgctcttg
gcaatggcagcggtgggtggctatttgatgtggcggaattggcagcacaagaacatgaaa
agcatgaactttgacaatcctgtgtacttgaagactaccgaagaggacttgtcaatagac
attggcagacacagtgcttctgttggacacacgtacccagcaatatcagttgtaagcaca
gatgatgatctagcttga
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