Panthera uncia (snow leopard): 125933953
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Entry
125933953 CDS
T08832
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc04151
PI3K-Akt signaling pathway
puc04382
Cornified envelope formation
puc04510
Focal adhesion
puc04512
ECM-receptor interaction
puc04820
Cytoskeleton in muscle cells
puc04926
Relaxin signaling pathway
puc04933
AGE-RAGE signaling pathway in diabetic complications
puc04974
Protein digestion and absorption
puc05146
Amoebiasis
puc05165
Human papillomavirus infection
puc05200
Pathways in cancer
puc05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125933953
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125933953
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125933953
09142 Cell motility
04820 Cytoskeleton in muscle cells
125933953
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
125933953
09154 Digestive system
04974 Protein digestion and absorption
125933953
09158 Development and regeneration
04382 Cornified envelope formation
125933953
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125933953
09162 Cancer: specific types
05222 Small cell lung cancer
125933953
09172 Infectious disease: viral
05165 Human papillomavirus infection
125933953
09174 Infectious disease: parasitic
05146 Amoebiasis
125933953
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
125933953
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
puc04147
]
125933953
00536 Glycosaminoglycan binding proteins [BR:
puc00536
]
125933953
Exosome [BR:
puc04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
125933953
Glycosaminoglycan binding proteins [BR:
puc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125933953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
125933953
NCBI-ProteinID:
XP_049503167
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All DBs
Position
A1
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AA seq
1712 aa
AA seq
DB search
MDRHQCSASSPALRRWLLLGAVTVGILAQSVLAGVKKFDVPCGGRDCSGGCQCFPEKGGR
GQPGPVGPQGYTGPPGLQGFPGLQGRKGDKGERGSPGITGPKGDVGARGVSGFPGADGIP
GHPGQGGPRGPPGHDGCNGTRGDVGHQGPVGPGGFIGPPGPQGPKGQKGEPYALSSVDRD
KYRGEPGEPGLVGFQGPPGRHGPMGQMGPVGAPGRPGPPGPPGPKGQPGNRGLGFYGQKG
EKGDMGQPGPNGIPSDIHHAIIGPMKEMFHPDQYKGEKGSEGEPGRKGIALKGEEGVMGF
SGTRGSPGLDGEKGSPGQKGSKGLDGYQGPDGPPGLKGEVGDRGPPGAPAYSPHPSLAKG
VRGDPGFPGAHGEPGSRGEPGDPGPPGPPGTSIGDEDGKRGLPGEMGPKGFIGDPGIPAL
YPGPPGTDGKPGPRGPPGPPGLPGPDGFLFGLKGAEGNVGYPGPSGFPGARGQKGWKGDA
GDCKCAEGDQFIGGLPGPPGPKGLPGINGEPGKKGSQGDPGQHGIPGFPGFKGAPGNVGP
PGPKGVKGDSRAITTKGERGQPGVPGVPGLKGDDGVPGRDGLDGFPGLPGPPGDGITGPP
GDTGYPGTPGTKGAPGERGPRGLGLPGPKGEHGFPGDVGSPGPPGFPGPAGPPGAPGQID
CDTGVKRPIGDDGQKTVRPDCVGGPKGAPGLRGPPGPTGAKGLQGIPGPSGADGVPGLKG
LPGDPGREGFPGPPGFVGPRGSKGMAGLRGPDGHPGPTGLPGPIGPPGDRGLPGEVLGAQ
PGPRGDAGLPGHPGLKGPPGERGPPGFRGSQGMPGMPGLKGQPGFPGPSGQPGLPGPPGL
HGFPGAPGQEGPLGLPGAPGLGGLPGDRGDPGDIGIPGPVGMKGLSGDRGDPGLLGERGP
PGGPGFKGMSGIPGVPGPKGSRGSPGMDGFQGMVGLKGRAGLPGNKGEAGFFGIPGLKGL
AGEPGVKGSRGDPGPPGPPPIIQPGMKDIKGEKGDEGPMGLKGYLGLKGVPGMPGIPGLS
GIPGLPGKPGHIKGVKGDIGVPGVPGLPGFPGVPGPPGIIGFPGFTGSRGDKGAPGRAGL
YGEVGPTGDFGDIGDTIDLPGSPGLKGERGVAGAPGLKGFFGEKGTEGEVGFPGITGVPG
VQGPPGPKGQAGFPGLTGLQGPQGEPGRAGAPGDKGDYGWPGIPGSPGFPGIRGISGLHG
LPGTKGFPGSPGVDAHGDPGFPGPAGDRGDPGEANTRPGPVGAPGQKGERGNPGERGPVG
SPGLQGFPGITPPSNISGSPGDKGVPGIFGPEGYRGPPGPPGPAALPGRKGDEGNPGAPG
NPGTKGWGGDPGPQGRPGVFGLPGVKGPRGEPGLMGNTGATGSVGDPGPKGPKGDRGLPG
APGSVGSPGIVGIPQKITVQPGPVGPHGRRGPPGAQGEMGPQGPPGEPGFRGAPGKAGPQ
GRGGISAVPGFRGDQGPMGQQGPIGQEGEPGRPGTPGLPGMPGRSVSIGYLLVKHSQTDQ
EPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASR
NDKSYWLSTTAPLPMMPVAEDEIKPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLW
IGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTIP
ERSFQGSPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtcaccagtgctcggcgtccagccctgccctgcggcggtggctgctgctgggg
gctgtgacagtggggatcctggcccagagcgtcctggcgggcgtgaagaagttcgacgtg
ccctgcgggggcagagactgtagcgggggctgccagtgtttccctgagaaaggagggcgg
ggccagccagggccagtgggcccccaggggtacaccgggcccccaggcctgcagggattc
ccaggactgcagggccgcaaaggtgacaagggcgagagggggtcaccggggatcacagga
ccaaaaggagatgtgggagcaagaggcgtttccggattccctggtgccgatggaattccc
ggacacccggggcaaggtgggcccagagggccacctggtcacgatggctgcaacgggacg
agaggagacgtgggccaccagggacccgtcggccccggggggttcattggccctcctggg
ccccaaggacccaaggggcagaaaggtgagccgtacgcgctttccagtgtggaccgcgac
aaatacaggggtgaacctggggagcctggattggtcggtttccaggggcctcctggccgc
cacgggcctatgggacagatgggtccggttggagctccaggaagaccaggcccgcctgga
ccccctggacctaaaggacagccgggcaacagaggacttggtttttatggacagaaggga
gagaagggtgacatgggacagccgggacccaatgggattccatcagacatccaccatgcc
atcatcgggcccatgaaggagatgttccacccagatcagtataagggcgaaaaggggagt
gagggggagccgggaagaaagggcatcgccttgaagggagaagaaggagtcatgggcttc
tcgggcacacggggttctcctggcctcgatggcgagaaaggttcaccaggacaaaaggga
agcaaaggactggatggttatcaaggcccggatggacccccgggactcaagggagaagtg
ggcgaccgcggccccccaggtgcccctgcgtactcgcctcatccctccctggccaaaggt
gtcaggggtgacccaggattcccaggggcccacggggagccaggaagccggggtgaacca
ggagacccgggcccaccaggcccccctggcacgtccatcggagacgaagatggcaagaga
ggtttaccaggtgaaatgggccccaaaggcttcataggagacccaggcatccccgcactg
taccccggccctccgggaaccgacggaaagccagggccccgaggaccgccagggcctccc
ggactacctgggccagacggtttccttttcggccttaaaggagcggaaggaaatgtgggc
taccctggcccttctggtttcccgggggctcgcggacagaaaggctggaaaggtgacgct
ggggactgtaagtgcgcagaaggcgaccagttcatcgggggcctcccggggccaccagga
cccaagggccttccaggcatcaacggggagcctgggaagaaagggagccagggagacccc
ggccagcatggcatccctgggttcccagggttcaagggcgcccctggcaacgtcgggcct
ccagggcccaaaggggtgaagggcgattctcgggcaatcaccaccaaaggtgagagggga
caaccaggtgtcccaggcgtgcctggcctgaaaggtgacgacggtgtcccagggcgcgat
gggctggatggattcccaggcctcccaggcccccctggtgacggcatcacaggcccccca
ggggacaccggttacccaggaacaccgggcacgaagggcgctccaggagagaggggcccc
cggggattgggcctgcccggccccaaaggcgagcacggtttccccggagatgtgggatca
cctggaccaccaggctttcccgggcccgctggtcccccgggtgctcccggacagatagac
tgcgatacaggtgtgaaaaggcccattggagatgacggacagaagaccgtgcggccagat
tgcgtcggaggacccaagggagcgccaggcctgcggggacccccaggccccacaggtgcc
aagggcctccaagggataccaggaccctcaggagctgacggagtaccagggctcaagggt
cttccaggagacccaggtcgtgaaggattcccaggacccccagggttcgtggggccccga
ggatccaaaggcatggcgggcctccgtggcccagatgggcacccaggtcccaccggtctg
ccggggcccatcgggcccccaggggacaggggccttcccggagaagttctgggagcccag
cctgggcccaggggagatgctgggctccccggacaccctgggctgaaaggccctccggga
gagagaggtccacctggattccggggaagccagggcatgccgggaatgccaggcctgaag
ggccagccgggcttcccaggaccctcgggccagccaggcctgcccgggccaccaggactg
catggcttcccaggagctcctggccaggaggggcccttggggctgccaggcgccccaggc
ctcggaggtctgcctggggacagaggggacccaggtgacataggcatccccggccctgtg
ggcatgaagggtctttctggcgacagaggtgaccctggtttgttgggtgagaggggtccc
ccaggaggccccggatttaaaggaatgagtggaattcccggtgtccccggacccaaaggc
agtagaggttcacccgggatggacggtttccaaggcatggttgggctcaagggaagagct
gggcttccaggaaacaaaggagaggccggattttttggaattccaggactgaagggtctg
gctggtgagccaggtgtgaaaggcagccgcggggacccggggcccccaggaccacctccc
atcatccagccaggaatgaaagacatcaaaggggagaaaggagacgaggggcctatgggg
ttgaaaggctacctgggcctaaaaggtgtcccggggatgccagggatccccgggctgtct
ggaatccccggcttgccagggaagccgggccacatcaaaggagtcaaaggagacatcgga
gtcccaggcgtgcccggattgccaggattccccggcgtgcccggcccccccggaatcatc
gggtttcccgggttcacaggaagtcggggcgacaagggagctccggggagagcgggtctt
tacggcgaggttggccccacaggtgatttcggtgacattggagacaccatagacctgcca
ggaagcccaggcctgaagggggagcggggcgtcgctggagcaccaggtctaaagggattc
tttggggaaaaaggaacggagggtgaagtcggcttccccgggataacaggcgtgccaggc
gtccaaggccctccaggacctaaagggcaagcaggcttcccaggactgacagggctacag
gggccgcagggagagccggggcgggcaggagcgcccggtgacaaaggagactatggctgg
cccgggatcccaggctcaccaggttttccgggcatccgaggcatcagcggactccacggc
ttgccaggcaccaaaggctttccaggatccccaggtgtggacgcccacggagaccccggc
tttcccggtcctgccggggacaggggtgacccaggagaggccaacacccgcccaggccct
gtcggagccccaggacagaaaggggagcgaggaaatccaggggaacgaggcccagtcggg
agtccgggacttcagggatttccaggaatcaccccaccttccaacatctctgggtcacct
ggtgacaaaggggtgccgggcatatttggcccagaaggttatcgagggcccccggggcca
cctggacctgctgctctccctggaaggaaaggagacgagggcaacccaggagccccagga
aaccccgggaccaaagggtggggcggggaccccgggccccagggccggcctggcgtgttc
gggctcccgggagtaaaaggacccagaggggagccaggactcatgggaaacacaggagcc
accgggagtgtgggcgacccaggccccaaggggcccaaaggagacaggggactcccaggt
gcccccggttctgtgggatcccctgggattgtgggaatcccccagaagatcactgtccag
ccagggccagtgggtccacacggaaggagaggccccccgggggcacagggagagatgggg
ccccagggccctccaggagagccaggtttccgcggggctccagggaaggcagggccccag
ggaagaggtggcatttctgctgttcctggattccgaggagaccaggggcccatgggacag
caggggcccatcggccaggaaggggagccaggccgcccggggacccccggcctgcccggc
atgcccggccgcagcgtcagcatcggctacctcctggtgaagcacagtcagacggaccag
gagcccatgtgccccgtgggcatgaacaagctctggagtgggtacagcctgctgtacttt
gaaggccaggagaaggcgcacaaccaggacctggggctggcgggctcctgcctggctcgg
ttcagcaccatgccctttctgtactgcaacccgggtgacgtgtgctactacgccagccgc
aacgacaagtcctactggctctccaccacggccccgctgcccatgatgccagtggccgag
gacgaaatcaagccttacatcagccgctgttccgtgtgtgaggccccagccgtcgccata
gcggtacacagtcaagatgtctccatcccccactgcccagctggatggcggagtctgtgg
attggatattctttcctcatgcacacggcggccggcgacgaaggcggtggccagtcgctg
gtgtctccgggcagctgcctggaggacttccgcgcgacgcccttcatcgagtgcaacggg
ggccgtggcacctgccactactacgccaacaagtacagcttctggctcaccaccatcccc
gagcgcagtttccagggctcgccgtccgccgacaccctcaaggcggggctcatccgcacg
cacatcagccgctgccaggtgtgcatgaagaacctgtga
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