Panthera uncia (snow leopard): 125934049
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Entry
125934049 CDS
T08832
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc04151
PI3K-Akt signaling pathway
puc04510
Focal adhesion
puc04512
ECM-receptor interaction
puc04820
Cytoskeleton in muscle cells
puc04926
Relaxin signaling pathway
puc04933
AGE-RAGE signaling pathway in diabetic complications
puc04974
Protein digestion and absorption
puc05146
Amoebiasis
puc05165
Human papillomavirus infection
puc05200
Pathways in cancer
puc05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125934049
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125934049
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125934049
09142 Cell motility
04820 Cytoskeleton in muscle cells
125934049
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
125934049
09154 Digestive system
04974 Protein digestion and absorption
125934049
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125934049
09162 Cancer: specific types
05222 Small cell lung cancer
125934049
09172 Infectious disease: viral
05165 Human papillomavirus infection
125934049
09174 Infectious disease: parasitic
05146 Amoebiasis
125934049
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
125934049
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
puc04147
]
125934049
00536 Glycosaminoglycan binding proteins [BR:
puc00536
]
125934049
Exosome [BR:
puc04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
125934049
Glycosaminoglycan binding proteins [BR:
puc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125934049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
125934049
NCBI-ProteinID:
XP_049503288
LinkDB
All DBs
Position
A1
Genome browser
AA seq
1668 aa
AA seq
DB search
GPRLGVWLLLLPAALLLHEERSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVIG
FPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPPG
IPGCNGTKGEPGPLGPPGLPGFTGNPGPPGLPGMKGDPGEIIGHVPGTLLKGERGFPGLP
GAPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPPG
VPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGEKGEKGSP
GFPGDAGYPGLPGREGFKGDKGEAGPPGPPGIVIGTGPLGEKGERGYPGSPGLRGEPGPK
GFPGLQGQPGPPGFPVPELAGAPGFPGERGQKGDQGFPGTSLPGPSGRDGLPGPPGPPGP
PGQPGHTNGIVECQPGPPGDRGAPGSPGQPGLTGEVGEKGQKGDSCLICDTAGLRGPPGP
QGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGVPGLMGQPGAKGEPGEIYFDARLKG
DKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDIG
PPGPPGFGPIGPVGDKGQMGFPGNAGPPGQPGPKGEAGQVVPLPGPPGAQGLPGSPGFQG
PQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDVGPPGSPGRPGFNGL
PGNPGVPGQKGEPGIGLPGLKGLPGLPGIPGTPGEKGNIGGPGVPGEHGVIGPPGLQGIR
GDPGPPGLQGPKGAPGVPGIGPPGAMGPPGGQGPPGSLGPPGLKGEKGFPGFPGLDMPGP
KGDKGSPGLPGLTGQSGLPGLPGQQGTPGLPGIPGPKGEMGVMGTPGQPGSPGPAGVPGL
PGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGP
TGDKGSRGDPGTPGMPGKDGQAGHPGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPGT
PGEKGVPGIPGPQGVPGLPGEKGAKGEKGQAGLPGIGIPGRPGDKGDQGVAGFPGSPGEK
GEKGSVGIPGIPGSPGPQGSPGSVGYPGSPGLPGDKGDRGLPGSAGIPGVKGEAGLPGKP
GPVGPAGQKGEPGSDGIPGSAGEKGEPGLPGRAFPGFPGAKGEKGSKGDVGFPGQAGSPG
IPGSKGEQGFMGPPGPQGQPGLPGAPGHAVEGPKGDRGAQGQPGLPGLPGPMGPPGLPGL
DGLKGDKGNPGWPGAPGAPGPKGDPGFQGLPGIGGSPGLTGSKGDIGPPGVPGFQGQKGL
PGLQGAKGDPGDQGFPGSKGLPGPPGPPGPYDIIKGEPGLPGPEGPPGLKGLPGPPGPKG
QQGVTGSVGLPGPPGVPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTPS
VDHGFLVTRHSQTTDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTMP
FLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPIAGDNIRPFISRCAVCEAPAMVMAVH
SQTIQIPQCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGT
CNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
gggccccggctcggcgtctggctgctgctgctgcccgccgccctcctgctccacgaggag
cgcagccgggccgctgcgaagggcggttgtgctggctctggctgcgggaagtgtgactgc
catggagtgaagggacagaagggtgaaagaggcctcccgggcttgcagggtgtcatcggg
ttccccgggatgcaaggaccggaggggccgcaggggcccccgggacagaagggtgacact
ggagaacccggactgcctggaacaaaggggacaaggggacccccaggagcatcaggttac
ccgggaaacccaggacttcctggtattcctggccaagatggcccccccggtcctccaggt
atccccggatgcaatggaacaaagggcgagccagggcctctggggcctccaggtttgcct
ggattcactggaaatcccggaccaccaggattaccaggaatgaagggggatccaggtgaa
ataattggccacgtgcctgggaccctgttgaaaggtgaaagaggatttcccggactccca
ggagcaccaggctcgccgggactgccagggctgcaaggtcctgtcggccccccgggattt
accggaccaccaggccctccaggtcctcctggccctccaggtgaaaaggggcaaatgggc
ttaagtttccaaggcccaaagggcgacaagggtgaccaaggggtcagtgggcccccgggg
gttccaggacaagctcaggttcaagaaaaaggagactttgccactaaaggagagaagggt
cagaaaggtgaacctggatttcagggaatgccaggggttggagagaaaggggagcccgga
aagccagggccccgaggaaaacctggcaaagatggtgaaaaaggagaaaaagggagtcca
gggttcccgggtgacgcagggtacccaggactccccggacgagaaggtttcaagggagac
aaaggtgaagcaggtcccccaggcccacctggaatcgtgatcggcacgggacccttggga
gaaaaaggagagcgggggtacccagggtctccagggttgagaggagagccaggccccaaa
ggtttcccaggattacaaggccagccaggccctccgggcttcccggtaccagagctggca
ggtgctcctggctttcccggtgaaagagggcagaaaggtgaccaagggtttccaggcaca
tctttgccgggaccaagtggaagggacgggctcccgggtccccccgggcctcctgggccc
cctggacagccgggtcacacaaatggaattgtggagtgccagcctggaccaccaggggac
cgaggtgcccctggaagtccggggcaaccagggctgacgggcgaagtcggagaaaaaggt
cagaaaggagacagttgcctcatctgtgacacagcaggacttcgtgggccccctggacca
cagggacccccaggagaaataggtttcccgggacagccaggggccaagggtgacagaggc
ttacccggcagagatggcctggaaggactgcctggaccgcaaggtgtgccagggctgatg
ggccagcccggagccaagggagagcctggcgagatttacttcgacgcacggctcaaagga
gacaaaggggacccgggcttcccaggccagcccgggatgccgggcagagcaggcactccg
gggagagacggccacccgggtctgcccggccccaaaggctccccgggttcagtagggttg
aaaggagagcgtggcccccccggaggagttggattccctggcagtcgtggcgacatcggc
cctcctgggcctccagggtttggccccatcggccccgttggtgacaaaggacaaatgggt
tttccagggaacgctggacccccaggccagccaggtcccaagggtgaagctggacaagtt
gtgcccctacctggtccccccggagcacaaggacttccggggtccccgggtttccaagga
ccccaaggtgaccgaggttttcctgggacgccgggaaggccaggcctcccgggagagaag
ggtgccgttggccagcccggaatcggatttccagggcctcctggccccaaaggtgtcgat
ggcctgcctggagacgtgggacctcccgggagcccaggccgcccaggatttaatggcttg
cctggcaacccgggtgtgcccggccaaaagggagagcctggcatcggtctgcctggactc
aaagggttgcctggtcttcccggcatccctggcacacctggggagaagggaaacatcggg
ggaccgggcgttccgggagagcatggtgttatcggccccccaggcctccagggaatcaga
ggtgacccaggaccacctggattacaaggtcccaagggagcccctggagttcccgggata
ggcccacctggagcgatgggcccccctggaggacagggaccaccagggtccttaggccct
cctggactgaagggagagaagggcttccccggatttccaggccttgacatgccgggcccg
aaaggagacaaagggtccccagggctgcccggcctgacagggcagtctgggctccccggt
cttcccggacagcagggcacgcctggccttcccggcattccaggtcccaagggagagatg
ggtgtcatggggaccccggggcagcccggctcgccaggcccggcaggagtgccaggattg
cccggagaaaaaggggaccacggcttcccgggctcctcggggcccaggggagaccccggc
ttcaagggtgacaaaggagatgtgggtctccctggcaagcctgggtccatggataaggtg
gacatgggcagcatgaagggtcagaagggagaccaaggagaaaaaggacaaattggacca
actggtgataaaggatcccggggagaccctggaaccccgggaatgccgggaaaggatggc
caggcagggcatcccgggcagccaggacctaaaggtgaccccggcatcggcgggaccccg
ggggctccagggctccctggacccaaaggatcggttggtggaatgggcctgccaggaaca
cccggagaaaaaggcgtgcctgggatccccggcccgcagggcgtccctggcttacccggg
gagaaaggcgcaaagggcgagaaagggcaggcaggcctccctggcattgggattccgggc
cggcctggcgacaagggagatcaaggggttgcaggatttccgggaagtcctggagagaag
ggagagaaaggaagcgtggggatcccggggatccctggctctcctggcccccaaggatcc
cctgggagcgttggctatccaggaagccctggcttgcctggggataaaggggacagaggc
ctcccaggatcggctggcattcccggtgtcaagggagaagcaggtcttcctgggaagcct
ggccccgtgggcccagctggccagaaaggggagcctggcagtgacggaatcccggggtcg
gcgggagagaagggggaaccaggcctgcctggaagagcattcccagggttcccaggggcc
aaaggagagaaaggttcaaagggtgatgtgggtttcccgggacaagctgggagtccagga
attcccggatccaaaggagagcaaggattcatgggtcccccggggccacaaggacagccg
ggcttacccggagctccgggccacgctgtggagggacctaaaggagaccggggtgcacag
ggtcagcctggcctgccagggcttccgggacccatggggcctccggggctccccgggctt
gatggactgaaaggtgacaaaggaaacccaggctggccgggggctcccggtgctccagga
cccaagggagatccaggattccagggcctgcctggaatcggtggctctccaggactcaca
ggctctaagggtgacataggacctccgggagttccaggatttcaaggtcagaaaggcctc
cccggcctgcagggagctaagggcgatccgggtgaccagggcttccctggaagcaaaggc
ctccctgggcccccaggccccccagggccctacgacatcatcaaaggagagccaggactc
cctggtccagagggtcccccaggtctgaaggggcttccgggaccaccaggccccaaagga
cagcaaggtgtgacaggatccgtgggcttgcctggacctccaggtgttcccggttttgac
ggtgctcctggccagaaaggagagacgggaccctttggcccccctggtccaagagggttt
ccaggcccaccaggtcccgacgggttgccaggatccatgggtcccccaggcaccccatct
gttgatcacgggttcctggtgacccggcacagtcagaccacggacgacccgcagtgtcct
cctgggaccaaaattctttaccacgggtactccctgctctacgtgcaaggcaacgagcgg
gcgcacggccaggacttgggcacggctgggagctgcctgcgcaagttcagcacgatgccc
ttcctgttctgtaacatcaacaacgtgtgcaacttcgcctcccgaaatgactactcctac
tggctgtccacccctgagcccatgcccatgtctatggcgcccatcgccggcgacaatatc
agaccgttcattagcaggtgtgcggtgtgcgaggctccggccatggtgatggccgtgcac
agccagaccatccagattccgcagtgccccagcggctggtcctccctctggattggctat
tccttcgtgatgcacaccagtgctggtgccgaaggttctggccaagccctggcatccccc
gggtcctgtctggaagagttcaggagcgcgccattcatcgagtgccacggacgtgggact
tgcaattactacgcgaacgcgtacagcttttggcttgccacgatcgagagaagcgagatg
ttcaagaagcccacgccatccaccttgaaggcgggggagctgcgcacacacgtcagccgt
tgccaagtctgtatgagaagaacataa
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