Panthera uncia (snow leopard): 125934767
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Entry
125934767 CDS
T08832
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125934767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
puc03019
]
125934767
Enzymes [BR:
puc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
125934767
Messenger RNA biogenesis [BR:
puc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125934767
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125934767
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
125934767
NCBI-ProteinID:
XP_049504313
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Position
A1
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AA seq
557 aa
AA seq
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MPKEKYEPPDPRRMYTIMSSEEAANGKKSHWAELEISGKVRSLSSSLWSLTHLTALHLSD
NSLSRIPSDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLF
QLQTLGLKGNPLTQDILNLYLEPDGTRRLLNYLLDNLAGTAKRISTEQPPPRSWIMLQEP
DRTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILNCNADIISLQE
VETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLATEKQLILVANA
HMHWDPEYSDVKLVQTMMFLSEVKNIIDKASRNLQSSVLGEFGTIPLVLCADLNSLPDSG
VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYT
NYTFDFKGIIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLEL
LLPFLPQVNGIHLPGRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaaaaatacgagcctcctgaccctaggaggatgtacacaattatgtcctct
gaagaagcagcaaatggaaagaaatcacattgggcagagcttgaaataagtggaaaagta
agaagcttaagctcatctttgtggtcactaactcacttgacagctttgcatctgagtgac
aattccctgtcccgcattccttcagacattgccaagcttcacaatctggtgtatctggac
ctgtcctctaataaaatccggagtttaccggcagaactcggaaacatggtatcactcagg
gaactccatttaaataacaacctgttacgagttctaccctttgagctgggaaaactgttt
cagttgcagactttaggcctgaaaggaaatccacttacccaggatatattgaacctctat
ctggaaccagatggaacaagaaggctactgaactatttgcttgataatttggcaggtact
gcaaaaagaatttcaacagaacagccacctccaagatcttggattatgttacaagaaccg
gacagaacaaggccaactgccttgttttctgtcatgtgctataatgttctttgtgataaa
tatgcgacccggcagttatacggctactgtccatcttgggcactaaattgggactacagg
aaaaaggccattattcaagaaattttgaactgcaatgctgatatcataagtcttcaggag
gttgaaacagaacagtattacagtttttttctggtagaactgaaagaacgtggctataat
ggattctttagtcctaaatctagagctaggacaatgtcagaacaagaaagaaaacatgtc
gatggctgtgcaatattcttcaagacggaaaaatttactttggttcagaaacacactgtt
gaatttaatcagctagcaatggcaaattcagaagggtctgaagccatgctgaacagagtc
atgacaaaagataacattggagttgcagtactgctagaacttcgaaaggaattgattgaa
atgtcatctggaaagccccatcttgcaacagaaaaacaacttattcttgtggctaatgct
catatgcattgggaccctgaatactctgatgtgaagttggttcaaactatgatgttcctc
tcagaagtgaagaacattattgataaagcctcacgaaacctccagtccagtgtattggga
gaatttggaactattccactggtgttatgtgcagatcttaattctttgccagattctggt
gttgtggaatatttgagtaccggtggagtagaaacaaatcataaagattttaaggaactg
agatataatgagagtcttacaaacttcagctgtaatgggaaaaacgggacaaccaatgga
aggatcactcatggtttcaagttgaagagtgcctacgagagcggcctgatgccttacaca
aattacacgttcgatttcaagggtataattgactacatcttctattctaaacctcagctg
aacactttaggcatcctgggacctctggaccaccactggctagttgagaataacatcagc
ggctgcccacatccactcatcccctccgaccacttctcactttttgcacaactggagctc
ttactgcctttcctgccccaagtcaacggcattcacctccctggcaggaggtag
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