Panthera uncia (snow leopard): 125934834
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Entry
125934834 CDS
T08832
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
125934834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
puc04131
]
125934834
Membrane trafficking [BR:
puc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125934834
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
125934834
RAVE complex
125934834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_VPS8
Beta-prop_WDR19_2nd
Beta-prop_HPS5
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
125934834
NCBI-ProteinID:
XP_049504384
LinkDB
All DBs
Position
A1
Genome browser
AA seq
3048 aa
AA seq
DB search
MNLHQVLTGAVNPGDHCFSVGSVGDQRFTAYASGCDIVILGSDFERLQIIPGAKHGNIQV
GCVDCSMQQGKIAASYGNVISVFEPVNLPKQKKNLELYSQWQKSGQFFLESIAHNITWDP
AGNRLLTGSSCLQLWSNANLEKPTEDENPDKADLNLGDWRCIWHCKTASQIHLMKFSPDG
EFFATAGKDDCLLKVWYNVENWRTAVTSPDKSSEKQSQGEMDFSFIYLAHPRAVNGFSWR
KTSKYMPRASVCNVLLTCCKDNVCRLWVETFLPNDCLLYGGDCSHWTEPINLTNNFKRNA
SSKERIQNASDVNLRHFRRGRRRSLALVAHTGYLPHQQDPHHVHRNAPLHANALCHFHIA
ASINPATDIPLLPSITSLSLSDNNEKSGPFVVHWLNNKELHFTLSMEVFLQQLRKSFEQP
SSEPSVEDSNQADVKSDEEMDDGVDDLKANHEKKELGSDKMVPNSSFVPLPSAAIDHQIE
VLLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDAN
SLCKSIVMYACTKNVDLAIQQGKQKPSSLTRSTSMLISSGHSKSTNSLKLSIFTPNVMMI
SKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNA
LRTPDVDNQKQPHDPVNIEECSVAQQNKSSIDVTFQDPNAVYSELILWRVDPVGPLSFSG
GVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQYLRLYEAVIDAK
KLLYELSNPEISKYVGEVFNIVSQQSTARPGCIIALDPITKLQGRKTQLLHVFQEDFILN
NLEKKSLGKDRILSDAGSSPNGFSEKFYLIVIECTQDNQSLLHMWNLHLKSIPVSLDEKV
DTKISEAVWQPEEHYSSSPEKILSPFSQKYQACRANLQSTSKLTLSSEMVYSQELNLPEG
VEIISVKPSAGHLSSSSIYPVCSAPYLLATSCSDEKVRFWRCRVTDGESATLKNGKMDLV
YIWEEWPLLIEDGLHSNSSITVPGRPVEVSCAHTNRLAVAYKQPASNSRSSQDFLMHVSI
FECESTGGSCWVLEQTIHLDELNTVLDSGISIDSNLVAYNKQEVYFSSKESITSNTKHLV
HLDWMSREDGSHILTVGIGSKLFMYGPLAGKVQEQAGKESLAFPLWEGTKAVPLSKFVLL
RSMDLVSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQPSSKQEPVVTESYNGSTP
SIISLIKQSNSSSSGLHPPKKTLTRSMTSLAQKICGKRTAFDPSVDTEDSGLFEAAHVLS
PTLPQYHPLQLLELMDLGKVRRAKAILSHLVKCIAGEVVALNEAESNHERRLRSLTISAS
GSTTRDPQAFNKSENTDYTEIDSVPPLPLYALLAADDDSCYASLEKSSNQSTLNNSNHLS
KESYDELFQIPTLMTDNHVLETDEENTKPRVIDLSQYSPTYFGPEHAQVLSGHLLHSSLP
GLSRMEQMSLMALADTIATTSTDIGESRDRSQGGETLDECGLKFLLAVRLHTFLTTSLPA
YRAQLLHQGLSTSHFAWAFHSVAEEELLSMLPAMQKDDPTWSELRAMGVGWWVRNTRTLR
KCIEKVAKAAFYRKNDPLDAAIFYLAMRKKAVIWGLYRSQKDTKMTQFFGHNFEDERWRK
AALKNAFSLLGKQRFEHSAAFFLLAGCLRDAIEVCLEKLNDIQLALVIARLYESEFDTSA
TYKSILRKKILGIDSPVSELNSLNISMHYDPFLRSMAYWILEDYSGALETLIKQPVREDD
DQVMMSACNPAVFNFYNYLRTHPLLLRRHFGSSDVLSTHMSLTGKSELAGTINLSERRLF
FTTASAHLKAGCPMLALEVLSKMPKVIKKTKPFCRTSSFLDTSKDYSPSSPVNLDAREDK
SSAVDWSQSVMNGFGSSSEGSSEKQTNSTLSFDWSQPSVVFQDDSLELKWDSDNDEENDD
LPISMKELKPLQRKTVKKVDETSSNYTDTLSTLDENDILSPSEDIIAVQLKFRACLKILT
VELRTLSTGYEIDGGKLRYQLYHWLEREVIALQRTCDYCSDGEELQSALDENGDGFGLNE
DSEDLLQQTKVKQLRENFQEKRRWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILLL
QESQQETSEPIFPSPLSEQTSVPLLFACTASAKTVVANPLLHLSNLTHDILHAIINFDSP
PHPDIQSNKVYVMHTLAASLSACIYQCLCGSHNCSSFQTNQFTGMMYQTVLLPHRHSLKT
GSLDEAVTPNTAPAQWPGITSLIRLLNSSGEEAQSGLTVLLCEILTAVYLSLFIHGLATH
SSNELFRIVAHPLNEKMWSAVFGGGAHVPSKEQTHSKPLPVSSLVEEGEKQNKRFRPSKM
SCRESAPPTSSSSPVSQDLLTVKEKFIPPELSIWDYFIAKPFLPPSQSRAEYDSEESLES
DDDDDDDDVLASDFHLQEHSNSNSYSWSLMRLAMVQLVLNNLKTFYPFAGHDLAELPVSS
PLCHAVLKTLQCWEQVLLRRLEIHGGPPQNYISSHTSEESVSAGPAILRHKALLEPTNTP
FRSKHHLALSVKRLWQYLVKQEEIQETFIRNIFTKKRCLNESLEDNCETIKNSMVEEPNI
NKIEADLGYPGGKARIIHKESDIITAFAVNKANRNCIAIASSHDVQELDVSGILATQIYT
WVDDDTEMENKGSEDFLVIHARDDLTAVQGTTPYTHSNPGTPINMPWLGSTQTGRGASVM
IKKAINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQITCFRSGGNSRVTRMRFNYQG
NKFGIVDADGYLSLYQTNWKCCPVTGSMPKPYLTWQCHNKTANDFVFVSSSSLIATAGLS
TDNRNICLWDTLVAPANSLVHAFTCHDSGATVLAYAPKHQLLISGGRKGFTCAFDLRQRQ
QRQLFQSHDSPVKAIAIDPTEEYFVTGSAEGNIKIWSLSTFTLLHTFINEHARQSIFRNI
GTGVMQIETGPANHVFSCGADGTMKMRILPDQFSPLNEVLKNDVKFML
NT seq
9147 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctgaccggggctgtgaaccctggcgaccactgcttctccgtg
ggcagcgtcggcgaccagcgcttcacggcttatgcatctggatgtgacattgttatactg
ggaagtgattttgaaaggttacaaataatcccaggagctaaacatggaaatattcaagta
ggatgtgtagactgctcaatgcaacaaggcaagattgcagcatcctatggaaatgttatc
tctgtgtttgaaccagttaacctaccgaagcaaaagaaaaatttggaattatatagtcaa
tggcagaaaagtggccaattttttctggaatcaatagcacacaacataacttgggatcct
gcaggcaatcgtcttttaactggttctagctgtttgcaactgtggtccaatgctaacttg
gagaagccaactgaagatgaaaatccagataaagcagatcttaatttgggggactggaga
tgcatttggcattgcaaaactgcttcccaaattcatttaatgaaattttcaccagatgga
gaattttttgccactgctgggaaggatgactgtcttttaaaggtatggtataatgtagaa
aactggcggacagctgttacctctccggataaaagttcagaaaaacaatcccaaggagaa
atggacttttcctttatatatctggcccatcctcgagctgtaaatggattttcctggcgt
aaaacaagcaaatatatgcctagggcttctgtatgtaatgtgttgttgacttgctgcaaa
gataatgtatgtcgtctgtgggtagagacctttttaccaaatgattgtttgctctatgga
ggtgactgcagccattggaccgaaccaattaatttaacaaataacttcaaaagaaatgct
tctagtaaagaacgaattcaaaatgcttcagatgtcaacctgagacattttcgcagaggt
cggaggagatcacttgctcttgtagcacatactggatacctgccacaccagcaggaccct
catcatgtccacaggaatgctcccctgcacgccaatgcactttgccactttcatattgca
gccagcatcaacccagccacagacattccacttcttccttctatcacatctctaagtcta
agtgacaataatgagaagagtgggccttttgtggtacactggctgaacaacaaagagttg
cattttactttgtccatggaagtatttttacagcaacttagaaaaagttttgaacagcca
tcttctgagcccagtgtagaagactctaatcaggcagacgtaaaatctgatgaagaaatg
gatgatggtgttgatgatctgaaagcaaatcatgaaaaaaaagaattgggcagtgataaa
atggtaccaaattcaagttttgtaccattaccctccgctgccattgatcatcagattgaa
gtacttctgtctgaatggagtaaaaatgcagacatgctattcagtattcatcccatggat
ggttctttgctggtttggcatgtggattggctggacgaataccagcctggtatgtttcgt
caagtccaggtgtcctttgtttccagaattcctgtagctttccccacaggtgatgcaaac
tctctctgtaaaagcatagtgatgtatgcctgcaccaagaatgttgacttggctattcag
caaggaaaacaaaaaccttctagtctcactcggtccacatcaatgctaatctcctctggt
cacagtaaatcaactaatagtttaaaattaagtatttttacccctaatgttatgatgatc
tcaaagcatgctgatggctctctgaatcagtggctggtcagttttgctgaagaatctgct
ttttctacagttctcagtatttctcataaatccagatattgtggtcatcggtttcatctt
aacgatttagcttgccattcagtattaccgttactgctgacgacgtcacaccataatgca
ctaaggacaccggatgtcgataaccaaaagcaacctcatgatcccgtaaatattgaagaa
tgttctgtggcacaacagaataaaagcagcattgatgtgacatttcaggatcccaatgca
gtttatagtgagcttattctttggagggttgatcccgttgggccattgtctttttctgga
ggtgtttctgaactggcccggattaattctctacatgtttctgcattttccaatgtggca
tggctgcccactcttatacccagctactgtctaggtgcatactgcaactctcctagtgca
tgctttgtagcaagcgatgggcagtatctgagattatatgaagctgttattgatgccaag
aaacttctatatgagctttccaatcctgaaatttctaaatatgttggtgaagtgtttaac
atagtaagtcagcagtcaacagccaggccaggatgcattatcgcattagatcccattacc
aaacttcaaggcagaaaaacccagctgcttcatgtttttcaagaagatttcattttgaat
aacctcgagaagaaaagtctgggaaaagacagaatattgtctgatgcaggcagctcacct
aatggattttctgagaaattctacctaattgtaatagagtgcacccaagacaaccaatca
ttgttacacatgtggaatttacatttaaagtccattcctgtctcattagatgaaaaagta
gatacaaaaatatctgaagcagtttggcaaccagaagaacattattcgtcttctccagag
aagatcctgtctcctttttcacagaagtatcaggcttgcagagcaaatctccagagtacc
agcaagttaactctgtcttcagaaatggtttatagccaagaattgaatttgccagaagga
gttgagataataagtgttaagccatcagcaggacatctgagttcttcttccatatatcct
gtgtgcagtgctccttatttattggcaacttcatgctcggatgagaaagtaagattctgg
agatgcagagtaacagatggagaatctgccacattgaagaatggaaaaatggatcttgta
tacatttgggaagaatggccgttacttattgaggatggacttcatagcaatagtagtata
accgtccctggtaggcctgtagaagttagctgtgcacatacaaatcggttagcagtagct
tataagcagcctgcatctaatagtaggtcttctcaggacttcttgatgcatgtaagcatt
tttgaatgtgagtctacaggaggttcctgttgggtccttgaacagacaattcatttagac
gaattaaatacagtgttagattctggcattagtattgatagcaacttagtggcttacaat
aagcaagaggtgtatttctccagtaaagagagtatcacatccaacacaaagcatttagtt
cacttagattggatgtccagagaggatggttctcatatcctcactgtaggaattggatca
aaactttttatgtatggacccctggctggcaaggtacaagaacaggctggtaaggaaagc
ctcgcatttcctctctgggaaggcactaaagctgtgcctctttctaaatttgtgctatta
agaagtatggatttggtttcttcagtagaaggctctccaccttttcctgtttctttgtca
tgggtccgggatggcatcctggtggtaggcatggactgtgaaatgcatgtatattcccag
tggcagccatcttctaaacaagaacccgttgtcacagagtcctacaatgggagcactcca
tctataataagtttaataaaacagagtaactcatcaagttctggattacatcctccaaag
aaaactctgactcgatccatgaccagtcttgcacagaaaatctgtggaaagagaactgcc
tttgatccttctgtagacacagaagattcaggtctttttgaagcagctcatgttctttcc
ccaactttacctcagtaccatcctttgcagcttttagaactcatggaccttggcaaagtt
cggagagcaaaggccatcttgtcgcaccttgtcaagtgcattgctggagaggttgtggct
ctgaatgaagccgaatccaaccacgagcgtcgccttagatctctcaccatcagtgctagt
ggaagcactaccagagatccccaggctttcaacaaaagtgaaaatacagattatacagaa
atagattctgtccctccgcttcctttatatgccttacttgcagcagatgatgatagctgt
tatgcgtctttagagaaatctagtaatcaaagtactttaaacaactcaaaccacttgtca
aaagaaagttatgatgagctttttcagatcccgactttaatgactgataatcatgtgtta
gagacagatgaagaaaacacaaagcccagggttatcgacctttcacaatacagtccaact
tactttggtcctgagcacgctcaggttctctctggccacttacttcattctagtttacca
ggactcagccggatggagcagatgtctctgatggccttagcagacacaatcgcaactacc
agcactgatatcggagaaagcagagacagaagccaaggtggagaaactctcgatgaatgt
gggttaaaatttcttttagctgttcgacttcatacgttccttacaacttcccttccagct
taccgagctcagctccttcaccaaggcctgtctactagtcattttgcctgggcgtttcac
tcggtagcagaggaggaactgctgagcatgctgccggccatgcagaaagatgatcccacc
tggtcagaactgagagccatgggcgtggggtggtgggtccggaacacccgcaccttacgc
aagtgcatagaaaaggtagctaaagcagccttttatagaaagaatgatcctttagatgct
gccattttttaccttgcaatgagaaagaaagctgtgatttggggcttatatagatcccaa
aaagacaccaagatgacacagttttttggacacaattttgaggatgagagatggcgtaaa
gcagctttaaagaatgccttttctttgttaggcaaacaaagatttgaacattctgcagca
ttttttcttttagctggttgcctcagagatgcaattgaggtatgtcttgagaaactgaat
gacattcagttggctcttgtaatagcaagactctatgagtctgaatttgatacatctgca
acatataaatctattttacgtaaaaaaattttgggaattgattctcctgtcagtgaactc
aattcattgaacataagtatgcattatgatccttttcttcggagtatggcatattggatt
ttggaagattatagtggtgctctggaaacattaataaagcaaccagtcagagaggatgat
gatcaagtcatgatgtcagcctgtaatcctgcagtttttaatttctacaattatctaaga
acgcatcctctgttgctgagacgtcattttggatcatctgatgtattgtctacacacatg
agtttaacgggaaaaagtgaactggcaggaacaatcaatttaagtgaaagaagattattt
tttactactgccagtgctcatttaaaagctggctgtcctatgttagctttggaagtatta
tcaaagatgccaaaagtaatcaagaaaacaaaacctttttgtagaacatcgagttttctg
gatactagtaaagactattctccttcttctccagtgaacttggatgcaagggaagataag
tcttctgctgttgattggtcacagtcagtgatgaatggttttggatcttcttcagagggt
tcctcagagaagcagacaaactccactctttctttcgactggagccaaccaagcgttgta
tttcaggatgactctttagaattaaaatgggacagtgataacgatgaagaaaatgatgat
ctccctatttcaatgaaagaactgaaacctttacagagaaaaacggtgaaaaaagtagat
gaaacaagttctaattatacagacactctcagcacactagatgaaaatgatattttgagt
ccatcagaagacataattgcagttcagttaaaatttagagcatgtttaaagattctcacc
gtagaacttcgtactttatctactggctatgaaatagatggtggaaaattgcgttaccaa
ctctaccactggcttgaaagagaggtaatagctcttcagaggacctgtgactattgttca
gatggagaagaattacagtctgccctggacgaaaatggagatggatttggattaaatgaa
gattctgaagatttgcttcagcaaacaaaagtgaaacaactgagagaaaattttcaggaa
aaaagacggtggcttttgaaatatcagtcactcttgaggatgtttctgagttactgcata
cttcatggatcccacggagggggtcttgcatctgtgagaatggagttgattttgctttta
caagaatctcagcaggaaacatcagaacccatatttcctagccctctgtcagagcaaacc
tcggtacccctcctctttgcttgtactgccagtgccaaaacagtagttgccaatccatta
ctgcaccttagtaacctcacacatgatattctgcatgccataataaactttgattcacca
ccccatcccgacatccagagcaataaggtatatgtaatgcatactttagcagcctcactt
tctgcttgtatttatcagtgcctttgtggtagtcataactgcagttcatttcaaacaaat
cagtttactggaatgatgtatcagacagtattgcttccccatcgacattctttgaaaaca
ggaagcttagacgaagcagtaactcctaatacagcaccagcacaatggccaggcataact
tctctaattcgacttttgaattcttctggcgaggaagcccagtcagggcttacagtttta
ctctgtgagattctcacagcagtgtatcttagtctcttcatccatggcctggcgacacat
tctagtaatgaactatttcggattgtggcccatcctctaaatgaaaaaatgtggtctgct
gtgtttggtggaggtgcgcatgttcccagcaaagaacagacacactcaaaacctttacct
gtttcttcacttgtggaagaaggagagaaacagaacaaacgttttaggccatcaaaaatg
tcttgcagagaatctgccccaccaacctcttcctcatcaccagtcagccaggacttactg
acagtcaaagagaagttcatcccaccggagctcagtatctgggactatttcatagccaag
ccttttctccctccttcccaaagtagagcagaatatgattcagaagagagtctggagagt
gatgatgatgatgatgatgatgatgttttagcttctgatttccatctgcaagagcattct
aattcaaattcatatagttggtcattgatgcgcttggcaatggtgcagttggtactcaac
aatttgaagactttctatccctttgcaggtcacgatcttgcagaacttccagttagttca
ccactttgtcatgcggttctgaaaactcttcagtgttgggaacaagttcttctccgacga
cttgaaatccatggtgggccacctcaaaactatatctcaagtcatacctctgaagagagt
gtgtctgcaggccctgcaattctccgccataaagctttgctggaacctacaaacactcct
ttcagatccaaacaccatctggcactgtctgtgaagagactttggcagtatttggtgaag
caggaagaaattcaggaaacttttatcagaaatatattcacgaagaaaagatgtctaaat
gagtcattagaggacaactgtgaaaccatcaaaaattctatggtggaggagccaaacatc
aataagatagaagcagacttgggatatcctggaggtaaagcaaggattattcacaaggaa
tctgatatcattactgcctttgctgttaataaagcaaatagaaactgcatagcaattgct
tcaagccatgatgttcaagagctggatgtttctggaattctggctacacagatctatact
tgggtagatgatgatactgaaatggaaaacaaaggatcagaagatttcttggttatacat
gctcgggatgatttaacagctgtgcaaggtacaaccccatatacacacagcaatcccggc
actccgatcaatatgccatggcttggaagtacacagaccggcagaggagcctctgtgatg
attaagaaagccattaataatgtcagaagaatgacttctcatccaactcttccgtactat
ctgacaggagctcaagatggaagtgtcagaatgtttgaatggggccattctcaacaaata
acctgttttcgatctggtggcaattcaagagttacaagaatgagatttaactatcaagga
aacaagtttggaatagttgatgctgatggatatttaagcctgtatcagacaaactggaaa
tgttgtccagtaactggaagcatgcctaagccatacctgacctggcagtgtcataacaaa
acagccaatgattttgtcttcgttagttcctcctctttgatagctacagctggtctttca
actgacaatagaaatatatgtttgtgggatactcttgtggcacctgccaatagtttagtc
catgcttttacttgccatgatagtggagctactgttttagcatatgctccaaaacaccag
ctactaatatcaggtggcagaaaaggctttacgtgtgcatttgaccttcgtcaacgacag
cagaggcagcttttccagagccatgattctcctgttaaagccattgccattgatccaaca
gaagagtactttgttacaggatctgctgaaggcaacataaagatttggagtctgtctacc
tttactcttctccacacttttatcaatgaacatgctcggcagtccattttccggaacatt
ggaactggagtgatgcagattgagacggggccagcaaaccacgtgttctcatgtggagcc
gatggtacaatgaagatgaggatactgccggatcagtttagcccactaaatgaagtgttg
aaaaatgatgtgaaatttatgctctga
DBGET
integrated database retrieval system