Panthera uncia (snow leopard): 125934928
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Entry
125934928 CDS
T08832
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125934928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
puc03019
]
125934928
Messenger RNA biogenesis [BR:
puc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
125934928
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
125934928
NCBI-ProteinID:
XP_049504521
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All DBs
Position
D1:26354554..26427180
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AA seq
717 aa
AA seq
DB search
MSGDGAPEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKIPNTVEEAVRIIT
GGAPELAVEGNGPVESNAVLAKAVKRPNEDSDEDEEKGAVVPPVHDIYRARQQKRIR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagacggagccccggagcaggcagctgagtatgtcccagagaaggtgaagaaa
gctgaaaagaaattagaagagaatccatatgaccttgacgcttggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacttatgaacgccttgttgcccag
ttccccagttctggcagattctggaaactatacattgaagcagagataaaagctaaaaat
tatgacaaggttgaaaagctatttcagagatgccttatgaaggttttgcacattgattta
tggaagtgttatctttcatacgttcgagaaactaagggtaaactgccaagttacaaagaa
aaaatggctcaagcatatgactttgcactggataaaattggaatggaaattatgtcttat
cagatttgggtggattacattaatttcttaaaaggcgtggaagctgttggatcttatgca
gaaaatcagagaataacagctgtccgaagagtttatcaacgaggttgtgttaatccaatg
atcaatattgaacaactctggagagactataacaagtatgaagagggtatcaatattcat
ttagctaaaaaaatgattgaagatcggagtcgagattacatgaatgctaggcgtgtagca
aaggaatatgagacagtaatgaaaggtttggaccgtaatgctccctcagtgcctcctcag
aatactccccaagaagcccagcaggtggatatgtggaagaaatacatacagtgggaaaag
agcaaccctcttcgtacggaagatcagacgcttatcacaaaaagagttatgtttgcttat
gaacagtgcctgcttgtactgggccatcaccctgatatttggtatgaagctgcccagtat
cttgaacagtcaagtaaactgcttgcagaaaagggggatatgaataatgccaaattattt
agtgatgaagctgctaatatatatgaaagagccataagcactttattaaagaagaatatg
cttctttattttgcatatgcagattatgaagagagtcgcatgaagtatgagaaagttcac
agtatatataacagacttttggcaattgaggatattgaccccaccttggtatatatccaa
tatatgaaatttgcgagaagagcagaaggtatcaaatctggaagaatgatatttaaaaaa
gcaagagaagataccagaacccgccaccatgtctatgttactgcagcactcatggagtat
tactgtagtaaggacaaatctgttgcctttaaaatttttgaactgggtctaaagaaatat
ggagacattccagaatatgtgttggcctatattgactatctttctcacctcaatgaggac
aataatacacgagttttgtttgaacgcgttttaacatctggaagccttcctccagagaag
tctggagaaatctgggcccgatttctagctttcgaaagcaatatcggtgatctagctagt
atactgaaagtggaaaagagacggtttacagcattcaaagaagagtatgaaggcaaagaa
acagctttgctggtggacagatacaagttcatggatttatatccttgctctgcaagtgaa
ctaaaagcgcttggttataaggatgtctcccgggctaagctagcagctataattccagac
ccagttgtagctccttctatagtgcctgttctgaaagatgaagtggatagaaaaccagaa
taccctaaaccagacactcagcagatgattccatttcagccacgacatttagcaccacca
ggcttacacccggtccccggtggcgtattcccagtaccacctgcagctgtcgttttaatg
aaacttctccctcctcccatctgcttccagggtccttttgtacaagtggatgaactgatg
gagattttccgaagatgcaagataccaaatactgtggaggaagctgtgaggatcatcacc
ggcggcgccccagagctggctgtagagggcaatggcccagtggaaagcaacgcagtactc
gccaaggccgtcaaaaggcccaacgaggattcagacgaagatgaagaaaagggagctgtc
gtccctcctgttcatgacatttacagagcgcggcagcagaagcgaattcggtga
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